RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 CALML3P27482 149 aa15.3■□□□□ 0.04
HDAC6-227ENST00000485102 PDE4DQ08499 809 aa15.3■□□□□ 0.04
HDAC6-227ENST00000485102 AAK1Q2M2I8 961 aa15.3■□□□□ 0.04
HDAC6-227ENST00000485102 GPATCH4Q5T3I0 446 aaKnown RBP15.3■□□□□ 0.04
HDAC6-227ENST00000485102 CCDC62Q6P9F0 684 aa15.3■□□□□ 0.04
HDAC6-227ENST00000485102 SLC30A10Q6XR72 485 aa15.3■□□□□ 0.04
HDAC6-227ENST00000485102 UHRF1Q96T88 793 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-227ENST00000485102 GPCPD1Q9NPB8 672 aa15.3■□□□□ 0.04
HDAC6-227ENST00000485102 TRIP12Q14669 1992 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-227ENST00000485102 FRMPD2Q68DX3 1309 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-227ENST00000485102 COL9A1P20849 921 aa15.29■□□□□ 0.04
HDAC6-227ENST00000485102 BFSP2Q13515 415 aa15.29■□□□□ 0.04
HDAC6-227ENST00000485102 ANKRD45Q5TZF3 282 aa15.29■□□□□ 0.04
HDAC6-227ENST00000485102 SESTD1Q86VW0 696 aa15.29■□□□□ 0.04
HDAC6-227ENST00000485102 DGKHQ86XP1 1220 aa15.29■□□□□ 0.04
HDAC6-227ENST00000485102 RETREG2Q8NC44 543 aa15.29■□□□□ 0.04
HDAC6-227ENST00000485102 FAM227BQ96M60 508 aa15.29■□□□□ 0.04
HDAC6-227ENST00000485102 TOMM22Q9NS69 142 aa15.29■□□□□ 0.04
HDAC6-227ENST00000485102 ZBTB47Q9UFB7 747 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-227ENST00000485102 MTCH2Q9Y6C9 303 aa15.29■□□□□ 0.04
HDAC6-227ENST00000485102 BRWD1Q9NSI6 2320 aa15.29■□□□□ 0.04
HDAC6-227ENST00000485102 A0A0D9SFI3 127 aa15.28■□□□□ 0.04
HDAC6-227ENST00000485102 BAIAP3O94812 1187 aa15.28■□□□□ 0.04
HDAC6-227ENST00000485102 CA3P07451 260 aa15.28■□□□□ 0.04
HDAC6-227ENST00000485102 TXNP10599 105 aaKnown RBP15.28■□□□□ 0.04
HDAC6-227ENST00000485102 HDAC1Q13547 482 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-227ENST00000485102 RRP12Q5JTH9 1297 aaKnown RBP15.28■□□□□ 0.04
HDAC6-227ENST00000485102 MFSD6Q6ZSS7 791 aa15.28■□□□□ 0.04
HDAC6-227ENST00000485102 DEFB128Q7Z7B8 93 aa15.28■□□□□ 0.04
HDAC6-227ENST00000485102 ANKS1AQ92625 1134 aa15.28■□□□□ 0.04
HDAC6-227ENST00000485102 RNF41Q9H4P4 317 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-227ENST00000485102 REV3LO60673 3130 aa15.28■□□□□ 0.04
HDAC6-227ENST00000485102 TCF20Q9UGU0 1960 aaKnown RBP15.27■□□□□ 0.04
HDAC6-227ENST00000485102 KIF28PB7ZC32 967 aa15.27■□□□□ 0.04
HDAC6-227ENST00000485102 GTPBP6O43824 516 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-227ENST00000485102 PARNO95453 639 aaKnown RBP15.27■□□□□ 0.04
HDAC6-227ENST00000485102 RBL2Q08999 1139 aa15.27■□□□□ 0.04
HDAC6-227ENST00000485102 CCDC178Q5BJE1 867 aa15.27■□□□□ 0.04
HDAC6-227ENST00000485102 FAM47CQ5HY64 1035 aa15.27■□□□□ 0.04
HDAC6-227ENST00000485102 ZNF589Q86UQ0 364 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-227ENST00000485102 HERC6Q8IVU3 1022 aa15.27■□□□□ 0.04
HDAC6-227ENST00000485102 IL27Q8NEV9 243 aa15.27■□□□□ 0.04
HDAC6-227ENST00000485102 CAGE1Q8TC20 777 aa15.27■□□□□ 0.04
HDAC6-227ENST00000485102 AFAP1L1Q8TED9 768 aa15.27■□□□□ 0.04
HDAC6-227ENST00000485102 CTAGE1Q96RT6 745 aa15.27■□□□□ 0.04
HDAC6-227ENST00000485102 IWS1Q96ST2 819 aa15.27■□□□□ 0.04
HDAC6-227ENST00000485102 COG5Q9UP83 839 aa15.27■□□□□ 0.04
HDAC6-227ENST00000485102 CCDC171Q6TFL3 1326 aa15.26■□□□□ 0.03
HDAC6-227ENST00000485102 ARIH2O95376 493 aa15.26■□□□□ 0.03
HDAC6-227ENST00000485102 CENPBP07199 599 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-227ENST00000485102 TAP1Q03518 808 aa15.26■□□□□ 0.03
HDAC6-227ENST00000485102 ESR2Q92731 530 aa15.26■□□□□ 0.03
HDAC6-227ENST00000485102 COPS5Q92905 334 aa15.26■□□□□ 0.03
HDAC6-227ENST00000485102 TANC1Q9C0D5 1861 aa15.26■□□□□ 0.03
HDAC6-227ENST00000485102 MFAP1P55081 439 aaKnown RBP15.25■□□□□ 0.03
HDAC6-227ENST00000485102 NMIQ13287 307 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-227ENST00000485102 PTGISQ16647 500 aa15.25■□□□□ 0.03
HDAC6-227ENST00000485102 TBC1D10CQ8IV04 446 aa15.25■□□□□ 0.03
HDAC6-227ENST00000485102 CCDC155Q8N6L0 562 aa15.25■□□□□ 0.03
HDAC6-227ENST00000485102 SYTL5Q8TDW5 730 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-227ENST00000485102 NSUN6Q8TEA1 469 aaKnown RBP15.25■□□□□ 0.03
HDAC6-227ENST00000485102 EMID1Q96A84 441 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-227ENST00000485102 LMCD1Q9NZU5 365 aa15.25■□□□□ 0.03
HDAC6-227ENST00000485102 KIAA1217Q5T5P2 1943 aa15.25■□□□□ 0.03
HDAC6-227ENST00000485102 ABCB11O95342 1321 aa15.24■□□□□ 0.03
HDAC6-227ENST00000485102 GH1P01241 217 aa15.24■□□□□ 0.03
HDAC6-227ENST00000485102 CXCL10P02778 98 aa15.24■□□□□ 0.03
HDAC6-227ENST00000485102 MMP3P08254 477 aa15.24■□□□□ 0.03
HDAC6-227ENST00000485102 CASTP20810 708 aaKnown RBP15.24■□□□□ 0.03
HDAC6-227ENST00000485102 HAND2P61296 217 aa15.24■□□□□ 0.03
HDAC6-227ENST00000485102 ARHGAP1Q07960 439 aa15.24■□□□□ 0.03
HDAC6-227ENST00000485102 GPNMBQ14956 572 aa15.24■□□□□ 0.03
HDAC6-227ENST00000485102 MCF2L2Q86YR7 1114 aa15.24■□□□□ 0.03
HDAC6-227ENST00000485102 AFG1LQ8WV93 481 aa15.24■□□□□ 0.03
HDAC6-227ENST00000485102 KAT2BQ92831 832 aa15.24■□□□□ 0.03
HDAC6-227ENST00000485102 C1QTNF1Q9BXJ1 281 aa15.24■□□□□ 0.03
HDAC6-227ENST00000485102 FTOQ9C0B1 505 aaKnown RBP eCLIP15.24■□□□□ 0.03
HDAC6-227ENST00000485102 NOD1Q9Y239 953 aa15.24■□□□□ 0.03
HDAC6-227ENST00000485102 EPOPA6NHQ4 379 aa15.23■□□□□ 0.03
HDAC6-227ENST00000485102 RFXAPO00287 272 aa15.23■□□□□ 0.03
HDAC6-227ENST00000485102 ZNF213O14771 459 aa15.23■□□□□ 0.03
HDAC6-227ENST00000485102 SELPP16109 830 aa15.23■□□□□ 0.03
HDAC6-227ENST00000485102 GHRHRQ02643 423 aa15.23■□□□□ 0.03
HDAC6-227ENST00000485102 TFF2Q03403 129 aa15.23■□□□□ 0.03
HDAC6-227ENST00000485102 AAMPQ13685 434 aa15.23■□□□□ 0.03
HDAC6-227ENST00000485102 STXBP2Q15833 593 aa15.23■□□□□ 0.03
HDAC6-227ENST00000485102 ASPRV1Q53RT3 343 aa15.23■□□□□ 0.03
HDAC6-227ENST00000485102 IQCA1Q86XH1 822 aa15.23■□□□□ 0.03
HDAC6-227ENST00000485102 PNMA1Q8ND90 353 aa15.23■□□□□ 0.03
HDAC6-227ENST00000485102 TBC1D5Q92609 795 aa15.23■□□□□ 0.03
HDAC6-227ENST00000485102 TAAR1Q96RJ0 339 aa15.23■□□□□ 0.03
HDAC6-227ENST00000485102 UBA5Q9GZZ9 404 aa15.23■□□□□ 0.03
HDAC6-227ENST00000485102 LPXNO60711 386 aa15.22■□□□□ 0.03
HDAC6-227ENST00000485102 EIF3JO75822 258 aaKnown RBP15.22■□□□□ 0.03
HDAC6-227ENST00000485102 ARHGEF15O94989 841 aa15.22■□□□□ 0.03
HDAC6-227ENST00000485102 GOLGA8HP0CJ92 632 aa15.22■□□□□ 0.03
HDAC6-227ENST00000485102 HOXD8P13378 290 aaPredicted RBP15.22■□□□□ 0.03
HDAC6-227ENST00000485102 SDSP20132 328 aa15.22■□□□□ 0.03
HDAC6-227ENST00000485102 RRP1P56182 461 aaKnown RBP15.22■□□□□ 0.03
HDAC6-227ENST00000485102 CDC37Q16543 378 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms