RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 SPC25Q9HBM1 224 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 ZSWIM6Q9HCJ5 1215 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 OGDHLQ9ULD0 1010 aa9.04□□□□□ -0.96
MACF1-220ENST00000485063 BAZ2BQ9UIF8 2168 aaKnown RBP9.03□□□□□ -0.96
MACF1-220ENST00000485063 SOWAHBA6NEL2 793 aa9.03□□□□□ -0.96
MACF1-220ENST00000485063 KBTBD13C9JR72 458 aa9.03□□□□□ -0.96
MACF1-220ENST00000485063 CYTH3O43739 400 aa9.03□□□□□ -0.96
MACF1-220ENST00000485063 PLEKHA8P1O95397 391 aa9.03□□□□□ -0.96
MACF1-220ENST00000485063 SNAI1O95863 264 aaPredicted RBP9.03□□□□□ -0.96
MACF1-220ENST00000485063 IGHA2P01877 340 aa9.03□□□□□ -0.96
MACF1-220ENST00000485063 TAL1P17542 331 aaPredicted RBP9.03□□□□□ -0.96
MACF1-220ENST00000485063 AKAP17AQ02040 695 aaKnown RBP9.03□□□□□ -0.96
MACF1-220ENST00000485063 PDE4DQ08499 809 aa9.03□□□□□ -0.96
MACF1-220ENST00000485063 APOBRQ0VD83 1088 aa9.03□□□□□ -0.96
MACF1-220ENST00000485063 COL9A3Q14050 684 aaPredicted RBP9.03□□□□□ -0.96
MACF1-220ENST00000485063 ARHGEF16Q5VV41 709 aa9.03□□□□□ -0.96
MACF1-220ENST00000485063 SLC30A10Q6XR72 485 aa9.03□□□□□ -0.96
MACF1-220ENST00000485063 TMTC3Q6ZXV5 915 aa9.03□□□□□ -0.96
MACF1-220ENST00000485063 RNF180Q86T96 592 aa9.03□□□□□ -0.96
MACF1-220ENST00000485063 SRBD1Q8N5C6 995 aaKnown RBP9.03□□□□□ -0.96
MACF1-220ENST00000485063 TRPV1Q8NER1 839 aa9.03□□□□□ -0.96
MACF1-220ENST00000485063 SHISA4Q96DD7 197 aa9.03□□□□□ -0.96
MACF1-220ENST00000485063 UPF2Q9HAU5 1272 aaKnown RBP9.03□□□□□ -0.96
MACF1-220ENST00000485063 PDRG1Q9NUG6 133 aa9.03□□□□□ -0.96
MACF1-220ENST00000485063 RBM27Q9P2N5 1060 aaKnown RBP9.03□□□□□ -0.96
MACF1-220ENST00000485063 BRPF3Q9ULD4 1205 aa9.03□□□□□ -0.96
MACF1-220ENST00000485063 LCTP09848 1927 aa9.03□□□□□ -0.96
MACF1-220ENST00000485063 GCOM1H8Y6P7 765 aaPredicted RBP9.02□□□□□ -0.97
MACF1-220ENST00000485063 POLR2MP0CAP2 368 aa9.02□□□□□ -0.97
MACF1-220ENST00000485063 ZNF865P0CJ78 1059 aaPredicted RBP9.02□□□□□ -0.97
MACF1-220ENST00000485063 ANKRD1Q15327 319 aa9.02□□□□□ -0.97
MACF1-220ENST00000485063 CCDC144BQ3MJ40 725 aa9.02□□□□□ -0.97
MACF1-220ENST00000485063 ANO1Q5XXA6 986 aa9.02□□□□□ -0.97
MACF1-220ENST00000485063 CPLX2Q6PUV4 134 aaKnown RBP9.02□□□□□ -0.97
MACF1-220ENST00000485063 NOL8Q76FK4 1167 aaKnown RBP9.02□□□□□ -0.97
MACF1-220ENST00000485063 EEPD1Q7L9B9 569 aa9.02□□□□□ -0.97
MACF1-220ENST00000485063 CMTR1Q8N1G2 835 aaKnown RBP9.02□□□□□ -0.97
MACF1-220ENST00000485063 SMARCC2Q8TAQ2 1214 aa9.02□□□□□ -0.97
MACF1-220ENST00000485063 NSUN6Q8TEA1 469 aaKnown RBP9.02□□□□□ -0.97
MACF1-220ENST00000485063 PAWRQ96IZ0 340 aaKnown RBP9.02□□□□□ -0.97
MACF1-220ENST00000485063 IWS1Q96ST2 819 aa9.02□□□□□ -0.97
MACF1-220ENST00000485063 RMDN3Q96TC7 470 aa9.02□□□□□ -0.97
MACF1-220ENST00000485063 AGXT2Q9BYV1 514 aa9.02□□□□□ -0.97
MACF1-220ENST00000485063 UPF3BQ9BZI7 483 aaKnown RBP9.02□□□□□ -0.97
MACF1-220ENST00000485063 C11orf49Q9H6J7 331 aa9.02□□□□□ -0.97
MACF1-220ENST00000485063 VTA1Q9NP79 307 aa9.02□□□□□ -0.97
MACF1-220ENST00000485063 XPNPEP3Q9NQH7 507 aa9.02□□□□□ -0.97
MACF1-220ENST00000485063 KIAA0100Q14667 2235 aaKnown RBP9.01□□□□□ -0.97
MACF1-220ENST00000485063 LRRC37A2A6NM11 1700 aa9.01□□□□□ -0.97
MACF1-220ENST00000485063 hCG_1984214I3L0E3 225 aa9.01□□□□□ -0.97
MACF1-220ENST00000485063 DNM1LO00429 736 aa9.01□□□□□ -0.97
MACF1-220ENST00000485063 CPLX1O14810 134 aa9.01□□□□□ -0.97
MACF1-220ENST00000485063 PPP1R11O60927 126 aaPredicted RBP9.01□□□□□ -0.97
MACF1-220ENST00000485063 DUSP11O75319 330 aaKnown RBP9.01□□□□□ -0.97
MACF1-220ENST00000485063 HSD17B4P51659 736 aa9.01□□□□□ -0.97
MACF1-220ENST00000485063 TNFAIP2Q03169 654 aa9.01□□□□□ -0.97
MACF1-220ENST00000485063 STXBP2Q15833 593 aa9.01□□□□□ -0.97
MACF1-220ENST00000485063 IQSEC1Q6DN90 963 aa9.01□□□□□ -0.97
MACF1-220ENST00000485063 HEATR3Q7Z4Q2 680 aa9.01□□□□□ -0.97
MACF1-220ENST00000485063 ZNF713Q8N859 430 aaPredicted RBP9.01□□□□□ -0.97
MACF1-220ENST00000485063 SYTL5Q8TDW5 730 aaPredicted RBP9.01□□□□□ -0.97
MACF1-220ENST00000485063 MORC4Q8TE76 937 aa9.01□□□□□ -0.97
MACF1-220ENST00000485063 TBC1D5Q92609 795 aa9.01□□□□□ -0.97
MACF1-220ENST00000485063 DPF3Q92784 378 aa9.01□□□□□ -0.97
MACF1-220ENST00000485063 ZNF274Q96GC6 653 aaPredicted RBP9.01□□□□□ -0.97
MACF1-220ENST00000485063 FGD4Q96M96 766 aa9.01□□□□□ -0.97
MACF1-220ENST00000485063 PURBQ96QR8 312 aaKnown RBP9.01□□□□□ -0.97
MACF1-220ENST00000485063 TAAR1Q96RJ0 339 aa9.01□□□□□ -0.97
MACF1-220ENST00000485063 GTF3C3Q9Y5Q9 886 aa9.01□□□□□ -0.97
MACF1-220ENST00000485063 KIAA1217Q5T5P2 1943 aa9.01□□□□□ -0.97
MACF1-220ENST00000485063 CNTNAP5Q8WYK1 1306 aa9.01□□□□□ -0.97
MACF1-220ENST00000485063 RIOK3O14730 519 aaKnown RBP9□□□□□ -0.97
MACF1-220ENST00000485063 C6orf222P0C671 652 aaPredicted RBP9□□□□□ -0.97
MACF1-220ENST00000485063 PDIA3P30101 505 aaKnown RBP9□□□□□ -0.97
MACF1-220ENST00000485063 CDC27P30260 824 aa9□□□□□ -0.97
MACF1-220ENST00000485063 ADD1P35611 737 aaKnown RBP9□□□□□ -0.97
MACF1-220ENST00000485063 NAPAP54920 295 aa9□□□□□ -0.97
MACF1-220ENST00000485063 CCT2P78371 535 aaKnown RBP9□□□□□ -0.97
MACF1-220ENST00000485063 GHRHRQ02643 423 aa9□□□□□ -0.97
MACF1-220ENST00000485063 TOB2Q14106 344 aaPredicted RBP9□□□□□ -0.97
MACF1-220ENST00000485063 SLC35G1Q2M3R5 365 aa9□□□□□ -0.97
MACF1-220ENST00000485063 C8orf34Q49A92 452 aa9□□□□□ -0.97
MACF1-220ENST00000485063 GJC2Q5T442 439 aaPredicted RBP9□□□□□ -0.97
MACF1-220ENST00000485063 FCHSD1Q86WN1 690 aa9□□□□□ -0.97
MACF1-220ENST00000485063 FBXO16Q8IX29 292 aaPredicted RBP9□□□□□ -0.97
MACF1-220ENST00000485063 TRIM22Q8IYM9 498 aa9□□□□□ -0.97
MACF1-220ENST00000485063 PCSK9Q8NBP7 692 aaKnown RBP9□□□□□ -0.97
MACF1-220ENST00000485063 CCDC12Q8WUD4 166 aaPredicted RBP9□□□□□ -0.97
MACF1-220ENST00000485063 SENP6Q9GZR1 1112 aaPredicted RBP9□□□□□ -0.97
MACF1-220ENST00000485063 AP5M1Q9H0R1 490 aa9□□□□□ -0.97
MACF1-220ENST00000485063 GLT8D2Q9H1C3 349 aa9□□□□□ -0.97
MACF1-220ENST00000485063 PSTPIP2Q9H939 334 aa9□□□□□ -0.97
MACF1-220ENST00000485063 EHMT1Q9H9B1 1298 aa9□□□□□ -0.97
MACF1-220ENST00000485063 PXMP2Q9NR77 195 aa9□□□□□ -0.97
MACF1-220ENST00000485063 V9GY48 417 aaPredicted RBP9□□□□□ -0.97
MACF1-220ENST00000485063 ASTN1O14525 1302 aa9□□□□□ -0.97
MACF1-220ENST00000485063 NID2Q14112 1375 aa8.99□□□□□ -0.97
MACF1-220ENST00000485063 hCG_1642624A0A1W2PR95 340 aa8.99□□□□□ -0.97
MACF1-220ENST00000485063 SPDYE3A6NKU9 549 aa8.99□□□□□ -0.97
MACF1-220ENST00000485063 OPLAHO14841 1288 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms