RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 ATP11BQ9Y2G3 1177 aa20.7■□□□□ 0.9
RNF38-207ENST00000484621 TTC28Q96AY4 2481 aa20.7■□□□□ 0.9
RNF38-207ENST00000484621 EXOSC10Q01780 885 aaKnown RBP20.69■□□□□ 0.9
RNF38-207ENST00000484621 IQSEC1Q6DN90 963 aa20.69■□□□□ 0.9
RNF38-207ENST00000484621 SGMS1Q86VZ5 419 aa20.69■□□□□ 0.9
RNF38-207ENST00000484621 SYTL5Q8TDW5 730 aaPredicted RBP20.69■□□□□ 0.9
RNF38-207ENST00000484621 BADQ92934 168 aa20.69■□□□□ 0.9
RNF38-207ENST00000484621 KCNB2Q92953 911 aa20.69■□□□□ 0.9
RNF38-207ENST00000484621 RRP36Q96EU6 259 aaKnown RBP20.69■□□□□ 0.9
RNF38-207ENST00000484621 JAKMIP1Q96N16 626 aaKnown RBP20.69■□□□□ 0.9
RNF38-207ENST00000484621 SPZ1Q9BXG8 430 aa20.69■□□□□ 0.9
RNF38-207ENST00000484621 PHF24Q9UPV7 400 aa20.69■□□□□ 0.9
RNF38-207ENST00000484621 SNX14Q9Y5W7 946 aa20.69■□□□□ 0.9
RNF38-207ENST00000484621 PLEKHA8P1O95397 391 aa20.68■□□□□ 0.9
RNF38-207ENST00000484621 FOSL2P15408 326 aa20.68■□□□□ 0.9
RNF38-207ENST00000484621 TAPT1Q6NXT6 567 aa20.68■□□□□ 0.9
RNF38-207ENST00000484621 SLC39A5Q6ZMH5 540 aa20.68■□□□□ 0.9
RNF38-207ENST00000484621 NSUN6Q8TEA1 469 aaKnown RBP20.68■□□□□ 0.9
RNF38-207ENST00000484621 TAAR1Q96RJ0 339 aa20.68■□□□□ 0.9
RNF38-207ENST00000484621 TSEN34Q9BSV6 310 aaKnown RBP20.68■□□□□ 0.9
RNF38-207ENST00000484621 AP5M1Q9H0R1 490 aa20.68■□□□□ 0.9
RNF38-207ENST00000484621 UPF3AQ9H1J1 476 aaKnown RBP20.68■□□□□ 0.9
RNF38-207ENST00000484621 SEC63Q9UGP8 760 aaKnown RBP20.68■□□□□ 0.9
RNF38-207ENST00000484621 KIAA1217Q5T5P2 1943 aa20.67■□□□□ 0.9
RNF38-207ENST00000484621 MYADML2A6NDP7 307 aa20.67■□□□□ 0.9
RNF38-207ENST00000484621 CPA1P15085 419 aa20.67■□□□□ 0.9
RNF38-207ENST00000484621 SMPD1P17405 629 aa20.67■□□□□ 0.9
RNF38-207ENST00000484621 ITGB8P26012 769 aa20.67■□□□□ 0.9
RNF38-207ENST00000484621 SMARCA1P28370 1054 aa20.67■□□□□ 0.9
RNF38-207ENST00000484621 EPHB4P54760 987 aa20.67■□□□□ 0.9
RNF38-207ENST00000484621 GJA9P57773 515 aa20.67■□□□□ 0.9
RNF38-207ENST00000484621 KCNA10Q16322 511 aa20.67■□□□□ 0.9
RNF38-207ENST00000484621 APOA5Q6Q788 366 aa20.67■□□□□ 0.9
RNF38-207ENST00000484621 BLOC1S2Q6QNY1 142 aa20.67■□□□□ 0.9
RNF38-207ENST00000484621 TLK2Q86UE8 772 aa20.67■□□□□ 0.9
RNF38-207ENST00000484621 FANCBQ8NB91 859 aa20.67■□□□□ 0.9
RNF38-207ENST00000484621 PCSK9Q8NBP7 692 aaKnown RBP20.67■□□□□ 0.9
RNF38-207ENST00000484621 KLHDC9Q8NEP7 349 aa20.67■□□□□ 0.9
RNF38-207ENST00000484621 RMDN3Q96TC7 470 aa20.67■□□□□ 0.9
RNF38-207ENST00000484621 PRDM5Q9NQX1 630 aaPredicted RBP20.67■□□□□ 0.9
RNF38-207ENST00000484621 COL20A1Q9P218 1284 aa20.67■□□□□ 0.9
RNF38-207ENST00000484621 NAP1L2Q9ULW6 460 aaPredicted RBP20.67■□□□□ 0.9
RNF38-207ENST00000484621 MUC3AQ02505 3323 aa20.67■□□□□ 0.9
RNF38-207ENST00000484621 TRIM43BA6NCK2 446 aa20.66■□□□□ 0.9
RNF38-207ENST00000484621 MOXD2PA6NHM9 499 aa20.66■□□□□ 0.9
RNF38-207ENST00000484621 OPLAHO14841 1288 aa20.66■□□□□ 0.9
RNF38-207ENST00000484621 DYNC1LI2O43237 492 aaPredicted RBP20.66■□□□□ 0.9
RNF38-207ENST00000484621 EDNRBP24530 442 aa20.66■□□□□ 0.9
RNF38-207ENST00000484621 CST5P28325 142 aaPredicted RBP20.66■□□□□ 0.9
RNF38-207ENST00000484621 HSD17B4P51659 736 aa20.66■□□□□ 0.9
RNF38-207ENST00000484621 ACLYP53396 1101 aa20.66■□□□□ 0.9
RNF38-207ENST00000484621 IRX5P78411 483 aaPredicted RBP20.66■□□□□ 0.9
RNF38-207ENST00000484621 TRIM60Q495X7 471 aa20.66■□□□□ 0.9
RNF38-207ENST00000484621 GNASQ5JWF2 1037 aa20.66■□□□□ 0.9
RNF38-207ENST00000484621 ARHGEF16Q5VV41 709 aa20.66■□□□□ 0.9
RNF38-207ENST00000484621 CMTR1Q8N1G2 835 aaKnown RBP20.66■□□□□ 0.9
RNF38-207ENST00000484621 CCDC82Q8N4S0 544 aa20.66■□□□□ 0.9
RNF38-207ENST00000484621 SRBD1Q8N5C6 995 aaKnown RBP20.66■□□□□ 0.9
RNF38-207ENST00000484621 TRIM43Q96BQ3 446 aaPredicted RBP20.66■□□□□ 0.9
RNF38-207ENST00000484621 WDR11Q9BZH6 1224 aa20.66■□□□□ 0.9
RNF38-207ENST00000484621 GNEQ9Y223 722 aaKnown RBP20.66■□□□□ 0.9
RNF38-207ENST00000484621 A0A1W2PQ45 241 aaPredicted RBP20.65■□□□□ 0.9
RNF38-207ENST00000484621 A0A1W2PQY0 241 aa20.65■□□□□ 0.9
RNF38-207ENST00000484621 ZBTB43O43298 467 aa20.65■□□□□ 0.9
RNF38-207ENST00000484621 EPB41L2O43491 1005 aaKnown RBP20.65■□□□□ 0.9
RNF38-207ENST00000484621 EIF2AK2P19525 551 aaKnown RBP20.65■□□□□ 0.9
RNF38-207ENST00000484621 PSMA5P28066 241 aa20.65■□□□□ 0.9
RNF38-207ENST00000484621 SAMD3Q8N6K7 520 aa20.65■□□□□ 0.9
RNF38-207ENST00000484621 PDLIM7Q9NR12 457 aa20.65■□□□□ 0.9
RNF38-207ENST00000484621 MAP3K20Q9NYL2 800 aaKnown RBP20.65■□□□□ 0.9
RNF38-207ENST00000484621 KLF18A0A0U1RQI7 1052 aa20.64■□□□□ 0.89
RNF38-207ENST00000484621 GCOM1H8Y6P7 765 aaPredicted RBP20.64■□□□□ 0.89
RNF38-207ENST00000484621 ASGR1P07306 291 aa20.64■□□□□ 0.89
RNF38-207ENST00000484621 POLR2MP0CAP2 368 aa20.64■□□□□ 0.89
RNF38-207ENST00000484621 PTGS1P23219 599 aa20.64■□□□□ 0.89
RNF38-207ENST00000484621 HOXA13P31271 388 aaPredicted RBP20.64■□□□□ 0.89
RNF38-207ENST00000484621 BEX3Q00994 111 aa20.64■□□□□ 0.89
RNF38-207ENST00000484621 DUSP28Q4G0W2 176 aa20.64■□□□□ 0.89
RNF38-207ENST00000484621 CCSAPQ6IQ19 270 aaPredicted RBP20.64■□□□□ 0.89
RNF38-207ENST00000484621 Q6ZUG5 572 aa20.64■□□□□ 0.89
RNF38-207ENST00000484621 TMTC3Q6ZXV5 915 aa20.64■□□□□ 0.89
RNF38-207ENST00000484621 SCFD2Q8WU76 684 aa20.64■□□□□ 0.89
RNF38-207ENST00000484621 VTI1AQ96AJ9 217 aa20.64■□□□□ 0.89
RNF38-207ENST00000484621 IWS1Q96ST2 819 aa20.64■□□□□ 0.89
RNF38-207ENST00000484621 USP26Q9BXU7 913 aa20.64■□□□□ 0.89
RNF38-207ENST00000484621 STARD7Q9NQZ5 370 aa20.64■□□□□ 0.89
RNF38-207ENST00000484621 PXMP2Q9NR77 195 aa20.64■□□□□ 0.89
RNF38-207ENST00000484621 RBM28Q9NW13 759 aaKnown RBP20.64■□□□□ 0.89
RNF38-207ENST00000484621 BRPF3Q9ULD4 1205 aa20.64■□□□□ 0.89
RNF38-207ENST00000484621 Q9Y3F1 56 aa20.64■□□□□ 0.89
RNF38-207ENST00000484621 RBM47A0AV96 593 aaKnown RBP20.63■□□□□ 0.89
RNF38-207ENST00000484621 CASTP20810 708 aaKnown RBP20.63■□□□□ 0.89
RNF38-207ENST00000484621 GHRHRQ02643 423 aa20.63■□□□□ 0.89
RNF38-207ENST00000484621 GRIN2CQ14957 1233 aa20.63■□□□□ 0.89
RNF38-207ENST00000484621 PPP2R5BQ15173 497 aa20.63■□□□□ 0.89
RNF38-207ENST00000484621 STXBP2Q15833 593 aa20.63■□□□□ 0.89
RNF38-207ENST00000484621 FSCN1Q16658 493 aaKnown RBP20.63■□□□□ 0.89
RNF38-207ENST00000484621 RTN1Q16799 776 aa20.63■□□□□ 0.89
RNF38-207ENST00000484621 TMEM63BQ5T3F8 832 aa20.63■□□□□ 0.89
RNF38-207ENST00000484621 GLT1D1Q96MS3 346 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms