RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 EXOSC10Q01780 885 aaKnown RBP14.22□□□□□ -0.13
MSH5-216ENST00000484309 KRT32Q14532 448 aa14.22□□□□□ -0.13
MSH5-216ENST00000484309 PPP2R5BQ15173 497 aa14.22□□□□□ -0.13
MSH5-216ENST00000484309 TSGA10IPQ3SY00 556 aa14.22□□□□□ -0.13
MSH5-216ENST00000484309 DUSP28Q4G0W2 176 aa14.22□□□□□ -0.13
MSH5-216ENST00000484309 ARHGEF16Q5VV41 709 aa14.22□□□□□ -0.13
MSH5-216ENST00000484309 CXCL17Q6UXB2 119 aa14.22□□□□□ -0.13
MSH5-216ENST00000484309 SEPT14Q6ZU15 432 aa14.22□□□□□ -0.13
MSH5-216ENST00000484309 DHX32Q7L7V1 743 aaKnown RBP14.22□□□□□ -0.13
MSH5-216ENST00000484309 FCHSD1Q86WN1 690 aa14.22□□□□□ -0.13
MSH5-216ENST00000484309 OR6J1Q8NGC5 347 aa14.22□□□□□ -0.13
MSH5-216ENST00000484309 NSUN6Q8TEA1 469 aaKnown RBP14.22□□□□□ -0.13
MSH5-216ENST00000484309 RRP36Q96EU6 259 aaKnown RBP14.22□□□□□ -0.13
MSH5-216ENST00000484309 ZFP91Q96JP5 570 aaPredicted RBP14.22□□□□□ -0.13
MSH5-216ENST00000484309 JAKMIP1Q96N16 626 aaKnown RBP14.22□□□□□ -0.13
MSH5-216ENST00000484309 MAP3K14Q99558 947 aa14.22□□□□□ -0.13
MSH5-216ENST00000484309 BRPF3Q9ULD4 1205 aa14.22□□□□□ -0.13
MSH5-216ENST00000484309 NAP1L2Q9ULW6 460 aaPredicted RBP14.22□□□□□ -0.13
MSH5-216ENST00000484309 SNX14Q9Y5W7 946 aa14.22□□□□□ -0.13
MSH5-216ENST00000484309 RBM47A0AV96 593 aaKnown RBP14.21□□□□□ -0.13
MSH5-216ENST00000484309 REC8O95072 547 aa14.21□□□□□ -0.13
MSH5-216ENST00000484309 ARIH2O95376 493 aa14.21□□□□□ -0.13
MSH5-216ENST00000484309 CALM1P0DP23 149 aa14.21□□□□□ -0.13
MSH5-216ENST00000484309 CALM2P0DP24 149 aa14.21□□□□□ -0.13
MSH5-216ENST00000484309 CALM3P0DP25 149 aa14.21□□□□□ -0.13
MSH5-216ENST00000484309 TXNP10599 105 aaKnown RBP14.21□□□□□ -0.13
MSH5-216ENST00000484309 MYCLP12524 364 aaPredicted RBP14.21□□□□□ -0.13
MSH5-216ENST00000484309 FXR1P51114 621 aaKnown RBP eCLIP14.21□□□□□ -0.13
MSH5-216ENST00000484309 C1orf53Q5VUE5 145 aa14.21□□□□□ -0.13
MSH5-216ENST00000484309 ERICH6BQ5W0A0 696 aa14.21□□□□□ -0.13
MSH5-216ENST00000484309 APOA5Q6Q788 366 aa14.21□□□□□ -0.13
MSH5-216ENST00000484309 SGMS1Q86VZ5 419 aa14.21□□□□□ -0.13
MSH5-216ENST00000484309 FANCBQ8NB91 859 aa14.21□□□□□ -0.13
MSH5-216ENST00000484309 SCFD2Q8WU76 684 aa14.21□□□□□ -0.13
MSH5-216ENST00000484309 UBE2OQ9C0C9 1292 aaKnown RBP14.21□□□□□ -0.13
MSH5-216ENST00000484309 PXMP2Q9NR77 195 aa14.21□□□□□ -0.13
MSH5-216ENST00000484309 SEC63Q9UGP8 760 aaKnown RBP14.21□□□□□ -0.13
MSH5-216ENST00000484309 SCN10AQ9Y5Y9 1956 aa14.21□□□□□ -0.13
MSH5-216ENST00000484309 RANBP2P49792 3224 aaKnown RBP14.2□□□□□ -0.14
MSH5-216ENST00000484309 A0A0U1RQG5 324 aaPredicted RBP14.2□□□□□ -0.14
MSH5-216ENST00000484309 KLF18A0A0U1RQI7 1052 aa14.2□□□□□ -0.14
MSH5-216ENST00000484309 TRIM43BA6NCK2 446 aa14.2□□□□□ -0.14
MSH5-216ENST00000484309 GCOM1H8Y6P7 765 aaPredicted RBP14.2□□□□□ -0.14
MSH5-216ENST00000484309 MYL3P08590 195 aa14.2□□□□□ -0.14
MSH5-216ENST00000484309 CLTBP09497 229 aa14.2□□□□□ -0.14
MSH5-216ENST00000484309 POLR2MP0CAP2 368 aa14.2□□□□□ -0.14
MSH5-216ENST00000484309 GNAQP50148 359 aa14.2□□□□□ -0.14
MSH5-216ENST00000484309 PSMC6P62333 389 aa14.2□□□□□ -0.14
MSH5-216ENST00000484309 FGD1P98174 961 aa14.2□□□□□ -0.14
MSH5-216ENST00000484309 STXBP2Q15833 593 aa14.2□□□□□ -0.14
MSH5-216ENST00000484309 SYNE3Q6ZMZ3 975 aa14.2□□□□□ -0.14
MSH5-216ENST00000484309 TMTC3Q6ZXV5 915 aa14.2□□□□□ -0.14
MSH5-216ENST00000484309 IL31RAQ8NI17 732 aa14.2□□□□□ -0.14
MSH5-216ENST00000484309 KCNB2Q92953 911 aa14.2□□□□□ -0.14
MSH5-216ENST00000484309 TRIM43Q96BQ3 446 aaPredicted RBP14.2□□□□□ -0.14
MSH5-216ENST00000484309 LBHD1Q9BQE6 289 aaPredicted RBP14.2□□□□□ -0.14
MSH5-216ENST00000484309 LZTS2Q9BRK4 669 aa14.2□□□□□ -0.14
MSH5-216ENST00000484309 ELP1O95163 1332 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 GOLGA8AA7E2F4 631 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 GOLGA8BA8MQT2 603 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 ZBTB43O43298 467 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 NR3C2P08235 984 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 NKX3-2P78367 333 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 GHRHRQ02643 423 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 APOBRQ0VD83 1088 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 TRAF1Q13077 416 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 TTLL4Q14679 1199 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 LY6KQ17RY6 165 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 BLOC1S2Q6QNY1 142 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 Q6ZUG5 572 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 PPP1R13LQ8WUF5 828 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 GPKOWQ92917 476 aaPredicted RBP eCLIP14.19□□□□□ -0.14
MSH5-216ENST00000484309 BADQ92934 168 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 IWS1Q96ST2 819 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 PDCD2LQ9BRP1 358 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 MAF1Q9H063 256 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 Q9Y3F1 56 aa14.19□□□□□ -0.14
MSH5-216ENST00000484309 CNTNAP5Q8WYK1 1306 aa14.18□□□□□ -0.14
MSH5-216ENST00000484309 DCDC2CA8MYV0 355 aa14.18□□□□□ -0.14
MSH5-216ENST00000484309 ARVCFO00192 962 aa14.18□□□□□ -0.14
MSH5-216ENST00000484309 ZEB2O60315 1214 aa14.18□□□□□ -0.14
MSH5-216ENST00000484309 SORBS3O60504 671 aa14.18□□□□□ -0.14
MSH5-216ENST00000484309 CASTP20810 708 aaKnown RBP14.18□□□□□ -0.14
MSH5-216ENST00000484309 ITGB8P26012 769 aa14.18□□□□□ -0.14
MSH5-216ENST00000484309 SMARCA1P28370 1054 aa14.18□□□□□ -0.14
MSH5-216ENST00000484309 BMP8BP34820 402 aa14.18□□□□□ -0.14
MSH5-216ENST00000484309 FAAP100Q0VG06 881 aa14.18□□□□□ -0.14
MSH5-216ENST00000484309 PGM5Q15124 567 aa14.18□□□□□ -0.14
MSH5-216ENST00000484309 RTN1Q16799 776 aa14.18□□□□□ -0.14
MSH5-216ENST00000484309 USP17L6PQ6QN14 398 aa14.18□□□□□ -0.14
MSH5-216ENST00000484309 TMEM39AQ9NV64 488 aa14.18□□□□□ -0.14
MSH5-216ENST00000484309 TRIP12Q14669 1992 aaPredicted RBP14.18□□□□□ -0.14
MSH5-216ENST00000484309 SCN5AQ14524 2016 aa14.17□□□□□ -0.14
MSH5-216ENST00000484309 SOX1O00570 391 aaPredicted RBP14.17□□□□□ -0.14
MSH5-216ENST00000484309 NKRFO15226 690 aaKnown RBP eCLIP14.17□□□□□ -0.14
MSH5-216ENST00000484309 SLC34A2O95436 690 aa14.17□□□□□ -0.14
MSH5-216ENST00000484309 HMGB1P09429 215 aaKnown RBP14.17□□□□□ -0.14
MSH5-216ENST00000484309 CPT1AP50416 773 aa14.17□□□□□ -0.14
MSH5-216ENST00000484309 CDK7P50613 346 aa14.17□□□□□ -0.14
MSH5-216ENST00000484309 CHMP4BP1P59074 171 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms