RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 ADAM21Q9UKJ8 722 aa21.94■■□□□ 1.1
LIMS2-215ENST00000484252 TARSL2A2RTX5 802 aaKnown RBP21.93■■□□□ 1.1
LIMS2-215ENST00000484252 TXKP42681 527 aa21.93■■□□□ 1.1
LIMS2-215ENST00000484252 GRB10Q13322 594 aa21.93■■□□□ 1.1
LIMS2-215ENST00000484252 PDIA5Q14554 519 aa21.93■■□□□ 1.1
LIMS2-215ENST00000484252 FOXR2Q6PJQ5 311 aa21.93■■□□□ 1.1
LIMS2-215ENST00000484252 ENC1O14682 589 aa21.92■■□□□ 1.1
LIMS2-215ENST00000484252 KLK7P49862 253 aa21.92■■□□□ 1.1
LIMS2-215ENST00000484252 ADCY7P51828 1080 aa21.92■■□□□ 1.1
LIMS2-215ENST00000484252 VAV2P52735 878 aa21.92■■□□□ 1.1
LIMS2-215ENST00000484252 KIF5AQ12840 1032 aa21.92■■□□□ 1.1
LIMS2-215ENST00000484252 SPA17Q15506 151 aa21.92■■□□□ 1.1
LIMS2-215ENST00000484252 MAP9Q49MG5 647 aa21.92■■□□□ 1.1
LIMS2-215ENST00000484252 VWA3BQ502W6 1294 aa21.92■■□□□ 1.1
LIMS2-215ENST00000484252 GUF1Q8N442 669 aaKnown RBP21.92■■□□□ 1.1
LIMS2-215ENST00000484252 CERKQ8TCT0 537 aa21.92■■□□□ 1.1
LIMS2-215ENST00000484252 CDK5RAP3Q96JB5 506 aa21.92■■□□□ 1.1
LIMS2-215ENST00000484252 GPR101Q96P66 508 aaPredicted RBP21.92■■□□□ 1.1
LIMS2-215ENST00000484252 BLOC1S4Q9NUP1 217 aa21.92■■□□□ 1.1
LIMS2-215ENST00000484252 USP17L5A8MUK1 530 aa21.92■■□□□ 1.1
LIMS2-215ENST00000484252 PPP1R18Q6NYC8 613 aa21.92■■□□□ 1.1
LIMS2-215ENST00000484252 LARP4BQ92615 738 aaKnown RBP21.92■■□□□ 1.1
LIMS2-215ENST00000484252 CCDC42Q96M95 316 aa21.92■■□□□ 1.1
LIMS2-215ENST00000484252 VIPAS39Q9H9C1 493 aa21.92■■□□□ 1.1
LIMS2-215ENST00000484252 HDAC6Q9UBN7 1215 aa21.92■■□□□ 1.1
LIMS2-215ENST00000484252 PDHBP11177 359 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 LRRC63Q05C16 580 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 PSMD2Q13200 908 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 IQCEQ6IPM2 695 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 CCDC84Q86UT8 332 aaPredicted RBP21.91■■□□□ 1.1
LIMS2-215ENST00000484252 SLC51AQ86UW1 340 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 PNMA5Q96PV4 448 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 LACRTQ9GZZ8 138 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 SLC39A2Q9NP94 309 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 TMEM260Q9NX78 707 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 PLAGL2Q9UPG8 496 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 TAF1LQ8IZX4 1826 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 MYMKA6NI61 221 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 USO1O60763 962 aaKnown RBP21.91■■□□□ 1.1
LIMS2-215ENST00000484252 MAN2A1Q16706 1144 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 MUM1L1Q5H9M0 696 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 NEK11Q8NG66 645 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 MMS19Q96T76 1030 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 UBA5Q9GZZ9 404 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 MED4Q9NPJ6 270 aa21.91■■□□□ 1.1
LIMS2-215ENST00000484252 HNRNPH2P55795 449 aaKnown RBP21.9■■□□□ 1.1
LIMS2-215ENST00000484252 CRY2Q49AN0 593 aa21.9■■□□□ 1.1
LIMS2-215ENST00000484252 HSP90B2PQ58FF3 399 aa21.9■■□□□ 1.1
LIMS2-215ENST00000484252 MFSD14BQ5SR56 506 aa21.9■■□□□ 1.1
LIMS2-215ENST00000484252 FNBP4Q8N3X1 1017 aaPredicted RBP21.9■■□□□ 1.1
LIMS2-215ENST00000484252 FAM71BQ8TC56 605 aa21.9■■□□□ 1.1
LIMS2-215ENST00000484252 SECISBP2LQ93073 1101 aaKnown RBP21.9■■□□□ 1.1
LIMS2-215ENST00000484252 RBM17Q96I25 401 aaKnown RBP21.9■■□□□ 1.1
LIMS2-215ENST00000484252 NDST4Q9H3R1 872 aa21.9■■□□□ 1.1
LIMS2-215ENST00000484252 MTMR4Q9NYA4 1195 aa21.9■■□□□ 1.1
LIMS2-215ENST00000484252 SIK3Q9Y2K2 1263 aa21.9■■□□□ 1.1
LIMS2-215ENST00000484252 LY75O60449 1722 aa21.9■■□□□ 1.1
LIMS2-215ENST00000484252 RCCD1A6NED2 376 aa21.89■■□□□ 1.1
LIMS2-215ENST00000484252 KRT79Q5XKE5 535 aa21.89■■□□□ 1.1
LIMS2-215ENST00000484252 PRR5LQ6MZQ0 368 aa21.89■■□□□ 1.1
LIMS2-215ENST00000484252 RAD54LQ92698 747 aa21.89■■□□□ 1.1
LIMS2-215ENST00000484252 EEF2KMTQ96G04 330 aa21.89■■□□□ 1.1
LIMS2-215ENST00000484252 TFR2Q9UP52 801 aa21.89■■□□□ 1.1
LIMS2-215ENST00000484252 SNHG28P0DPA3 235 aa21.89■■□□□ 1.09
LIMS2-215ENST00000484252 ADRA2BP18089 450 aa21.89■■□□□ 1.09
LIMS2-215ENST00000484252 TRIM58Q8NG06 486 aa21.89■■□□□ 1.09
LIMS2-215ENST00000484252 SUGCTQ9HAC7 445 aa21.89■■□□□ 1.09
LIMS2-215ENST00000484252 RIC8AQ9NPQ8 531 aa21.89■■□□□ 1.09
LIMS2-215ENST00000484252 VPS18Q9P253 973 aa21.89■■□□□ 1.09
LIMS2-215ENST00000484252 SEPT2Q15019 361 aa21.88■■□□□ 1.09
LIMS2-215ENST00000484252 EDEM3Q9BZQ6 932 aa21.88■■□□□ 1.09
LIMS2-215ENST00000484252 C10orf71Q711Q0 1435 aa21.88■■□□□ 1.09
LIMS2-215ENST00000484252 BBOX1O75936 387 aa21.87■■□□□ 1.09
LIMS2-215ENST00000484252 LCA5LO95447 670 aa21.87■■□□□ 1.09
LIMS2-215ENST00000484252 IDEP14735 1019 aa21.87■■□□□ 1.09
LIMS2-215ENST00000484252 TMEM119Q4V9L6 283 aa21.87■■□□□ 1.09
LIMS2-215ENST00000484252 PPP4R3AQ6IN85 833 aa21.87■■□□□ 1.09
LIMS2-215ENST00000484252 ARHGAP27Q6ZUM4 889 aa21.87■■□□□ 1.09
LIMS2-215ENST00000484252 PROM2Q8N271 834 aa21.87■■□□□ 1.09
LIMS2-215ENST00000484252 CAGE1Q8TC20 777 aa21.87■■□□□ 1.09
LIMS2-215ENST00000484252 HPS3Q969F9 1004 aa21.87■■□□□ 1.09
LIMS2-215ENST00000484252 TSG101Q99816 390 aa21.87■■□□□ 1.09
LIMS2-215ENST00000484252 JRKLQ9Y4A0 524 aa21.87■■□□□ 1.09
LIMS2-215ENST00000484252 FRMPD2Q68DX3 1309 aaPredicted RBP21.87■■□□□ 1.09
LIMS2-215ENST00000484252 SLC37A4O43826 429 aa21.87■■□□□ 1.09
LIMS2-215ENST00000484252 SRGAP2O75044 1071 aa21.87■■□□□ 1.09
LIMS2-215ENST00000484252 TACC1O75410 805 aa21.87■■□□□ 1.09
LIMS2-215ENST00000484252 SNX29Q8TEQ0 813 aa21.87■■□□□ 1.09
LIMS2-215ENST00000484252 FOCADQ5VW36 1801 aa21.87■■□□□ 1.09
LIMS2-215ENST00000484252 THSD7AQ9UPZ6 1657 aa21.87■■□□□ 1.09
LIMS2-215ENST00000484252 IGKV6D-41A0A0C4DH26 115 aa21.86■■□□□ 1.09
LIMS2-215ENST00000484252 VGLL3A8MV65 326 aa21.86■■□□□ 1.09
LIMS2-215ENST00000484252 TDP2O95551 362 aa21.86■■□□□ 1.09
LIMS2-215ENST00000484252 PRLRP16471 622 aa21.86■■□□□ 1.09
LIMS2-215ENST00000484252 CYP27A1Q02318 531 aa21.86■■□□□ 1.09
LIMS2-215ENST00000484252 GABPAQ06546 454 aa21.86■■□□□ 1.09
LIMS2-215ENST00000484252 EHHADHQ08426 723 aa21.86■■□□□ 1.09
LIMS2-215ENST00000484252 COA7Q96BR5 231 aa21.86■■□□□ 1.09
LIMS2-215ENST00000484252 IFIH1Q9BYX4 1025 aaKnown RBP21.86■■□□□ 1.09
LIMS2-215ENST00000484252 PCDHA13Q9Y5I0 950 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms