RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 PSMD2Q13200 908 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 AP3B2Q13367 1082 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 TUBB2AQ13885 445 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 KRT79Q5XKE5 535 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 TTI2Q6NXR4 508 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 UNC13DQ70J99 1090 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 RASGRP2Q7LDG7 609 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 RETREG2Q8NC44 543 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 GMCL1P1Q8NEA9 526 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 P2RX5Q93086 422 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 COA7Q96BR5 231 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 GMCL1Q96IK5 515 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 CDK5RAP3Q96JB5 506 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 FEZ1Q99689 392 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 MMTAG2Q9BU76 263 aaKnown RBP8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 TUBB2BQ9BVA1 445 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 NUP58Q9BVL2 599 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 MXD3Q9BW11 206 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 CCDC94Q9BW85 323 aaPredicted RBP8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 PSTPIP2Q9H939 334 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 DBNDD1Q9H9R9 158 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 TMEM260Q9NX78 707 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 FAM198AQ9UFP1 575 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 DNAI1Q9UI46 699 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 ZNF215Q9UL58 517 aaPredicted RBP8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 PCDHB13Q9Y5F0 798 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 KDM3AQ9Y4C1 1321 aa8.27□□□□□ -1.09
SHROOM3-206ENST00000484236 FOSP01100 380 aaPredicted RBP8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 GYPCP04921 128 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 EEF2P13639 858 aaKnown RBP8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 RXRBP28702 533 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 TXKP42681 527 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 SLC1A4P43007 532 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 TUBB4BP68371 445 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 ASIC1P78348 528 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 UBXN1Q04323 297 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 GRB10Q13322 594 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 TMEM119Q4V9L6 283 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 HYIQ5T013 277 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 SLFN13Q68D06 897 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 CYP26C1Q6V0L0 522 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 IRF2BP1Q8IU81 584 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 KIAA0825Q8IV33 1275 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 KCTD17Q8N5Z5 321 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 CSGALNACT2Q8N6G5 542 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 MB21D1Q8N884 522 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 ZNF397Q8NF99 534 aaPredicted RBP8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 C7orf43Q8WVR3 580 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 LARP4BQ92615 738 aaKnown RBP8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 RAD54LQ92698 747 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 TRIM47Q96LD4 638 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 MBOAT7Q96N66 472 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 HS3ST6Q96QI5 342 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 NT5C3AQ9H0P0 336 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 VPS33BQ9H267 617 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 DNAJC18Q9H819 358 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 BLOC1S4Q9NUP1 217 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 MYO1AQ9UBC5 1043 aa8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 DDX25Q9UHL0 483 aaKnown RBP8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 HERC5Q9UII4 1024 aaKnown RBP8.26□□□□□ -1.09
SHROOM3-206ENST00000484236 USP17L10C9JJH3 530 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 TBX3O15119 743 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 EDIL3O43854 480 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 PPP1R11O60927 126 aaPredicted RBP8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 TDP2O95551 362 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 CASQ1P31415 396 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 CASP14P31944 242 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 CCT6AP40227 531 aaKnown RBP8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 TNNI2P48788 182 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 MMP14P50281 582 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 RBM5P52756 815 aaKnown RBP eCLIP8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 EIF6P56537 245 aaKnown RBP8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 ATP2B2Q01814 1243 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 ICA1Q05084 483 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 LRRC63Q05C16 580 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 SLC15A2Q16348 729 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 CDC37Q16543 378 aaPredicted RBP8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 ABCB5Q2M3G0 1257 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 TSR1Q2NL82 804 aaKnown RBP8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 QRICH1Q2TAL8 776 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 FIGNQ5HY92 759 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 RBM26Q5T8P6 1007 aaKnown RBP8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 CENPPQ6IPU0 288 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 TTBK2Q6IQ55 1244 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 BTNL9Q6UXG8 535 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 TOGARAM2Q6ZUX3 1019 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 ZFPM1Q8IX07 1006 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 SLFN12Q8IYM2 578 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 GUF1Q8N442 669 aaKnown RBP8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 ZNF507Q8TCN5 953 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 LRRC15Q8TF66 581 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 TSC1Q92574 1164 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 PNMA5Q96PV4 448 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 AMNQ9BXJ7 453 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 VPS16Q9H269 839 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 ABHD10Q9NUJ1 306 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 STK32BQ9NY57 414 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 TAB2Q9NYJ8 693 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 TMOD2Q9NZR1 351 aa8.25□□□□□ -1.09
SHROOM3-206ENST00000484236 CAPN11Q9UMQ6 739 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms