RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 DUX4L7P0CJ90 424 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 HSPA8P11142 646 aaKnown RBP11.1□□□□□ -0.63
COL12A1-207ENST00000483888 PLS3P13797 630 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 RAB14P61106 215 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 CRLF3Q8IUI8 442 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 PBKQ96KB5 322 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 POLE3Q9NRF9 147 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 TBC1D7Q9P0N9 293 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 DUX4Q9UBX2 424 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 TRIM37O94972 964 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 ACSL3O95573 720 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 CYB5D1Q6P9G0 228 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 ANKRD13CQ8N6S4 541 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 ARHGAP26Q9UNA1 814 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 FAM200BP0CF97 657 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 STX1BP61266 288 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 SFSWAPQ12872 951 aaKnown RBP11.1□□□□□ -0.63
COL12A1-207ENST00000483888 EPM2AIP1Q7L775 607 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-207ENST00000483888 FAM133AQ8N9E0 248 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 COPB1P53618 953 aaKnown RBP11.1□□□□□ -0.63
COL12A1-207ENST00000483888 KPNB1Q14974 876 aaKnown RBP11.1□□□□□ -0.63
COL12A1-207ENST00000483888 CCDC144BQ3MJ40 725 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 DBF4Q9UBU7 674 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-207ENST00000483888 RGS12O14924 1447 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 GPC4O75487 556 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 KIF23Q02241 960 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-207ENST00000483888 OTUD7AQ8TE49 926 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-207ENST00000483888 ZNF483Q8TF39 744 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-207ENST00000483888 LRWD1Q9UFC0 647 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 PI4KAP2A4QPH2 592 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 H7C1D1 291 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 GLE1Q53GS7 698 aaKnown RBP11.1□□□□□ -0.63
COL12A1-207ENST00000483888 CEP78Q5JTW2 689 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 PI4KAP1Q8N8J0 262 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 USP27XA6NNY8 438 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 DEXIO95424 95 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 LRRC36Q1X8D7 754 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 OTUD7BQ6GQQ9 843 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 BTNL9Q6UXG8 535 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 USP33Q8TEY7 942 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 ATP6V0A4Q9HBG4 840 aa11.1□□□□□ -0.63
COL12A1-207ENST00000483888 DAPK3O43293 454 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 GARSP41250 739 aaKnown RBP11.09□□□□□ -0.63
COL12A1-207ENST00000483888 TTC6Q86TZ1 520 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 DCLK2Q8N568 766 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 RNPEPQ9H4A4 650 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 PYGBP11216 843 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 GNA11P29992 359 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 VSTM4Q8IW00 320 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 HDAC11Q96DB2 347 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 MRGBPQ9NV56 204 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 PECAM1P16284 738 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-207ENST00000483888 SAT1P21673 171 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 ZNF827Q17R98 1081 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 UBE3BQ7Z3V4 1068 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 ZFYVE19Q96K21 471 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 EXOC5O00471 708 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 SEC16BQ96JE7 1060 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 ANAPC5Q9UJX4 755 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 SRGAP2O75044 1071 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 SEMA3FQ13275 785 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 TTC38Q5R3I4 469 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 RAB20Q9NX57 234 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 STMN3Q9NZ72 180 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 ZFATQ9P243 1243 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 ARHGAP5Q13017 1502 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 H0Y626 953 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 IKBKBO14920 756 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 CA4P22748 312 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 ITGB3BPQ13352 177 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-207ENST00000483888 PIK3AP1Q6ZUJ8 805 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 ZNF692Q9BU19 519 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-207ENST00000483888 ZNF148Q9UQR1 794 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 SASH1O94885 1247 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 SF3B3Q15393 1217 aaKnown RBP11.09□□□□□ -0.63
COL12A1-207ENST00000483888 LETM2Q2VYF4 491 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 C17orf50Q8WW18 174 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 MLXIPLQ9NP71 852 aa11.09□□□□□ -0.63
COL12A1-207ENST00000483888 SOS1Q07889 1333 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-207ENST00000483888 NOP56O00567 594 aaKnown RBP11.08□□□□□ -0.63
COL12A1-207ENST00000483888 YWHAGP61981 247 aaKnown RBP eCLIP11.08□□□□□ -0.63
COL12A1-207ENST00000483888 COG1Q8WTW3 980 aa11.08□□□□□ -0.63
COL12A1-207ENST00000483888 CFAP36Q96G28 342 aa11.08□□□□□ -0.63
COL12A1-207ENST00000483888 PDLIM2Q96JY6 352 aa11.08□□□□□ -0.63
COL12A1-207ENST00000483888 TRIM8Q9BZR9 551 aa11.08□□□□□ -0.63
COL12A1-207ENST00000483888 TMEM165Q9HC07 324 aa11.08□□□□□ -0.63
COL12A1-207ENST00000483888 GGT7Q9UJ14 662 aa11.08□□□□□ -0.63
COL12A1-207ENST00000483888 MDH1P40925 334 aaKnown RBP11.08□□□□□ -0.64
COL12A1-207ENST00000483888 PLA2G4DQ86XP0 818 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 SUGP1Q8IWZ8 645 aaKnown RBP11.08□□□□□ -0.64
COL12A1-207ENST00000483888 CATSPER2Q96P56 530 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 PRMT1Q99873 361 aaKnown RBP11.08□□□□□ -0.64
COL12A1-207ENST00000483888 CRNKL1Q9BZJ0 848 aaKnown RBP11.08□□□□□ -0.64
COL12A1-207ENST00000483888 SMYD2Q9NRG4 433 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 A0A087WWV3 80 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 Q4G0T1 1027 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 CCPG1Q9ULG6 757 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 NDUFA10O95299 355 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 DCTN4Q9UJW0 460 aa11.08□□□□□ -0.64
COL12A1-207ENST00000483888 MAGEA13PA6NCF6 341 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms