RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TRMT13Q9NUP7 481 aaKnown RBP21.08■□□□□ 0.97
ATG4B-221ENST00000483778 CYP2C9P11712 490 aa21.07■□□□□ 0.96
ATG4B-221ENST00000483778 SLC35G1Q2M3R5 365 aa21.07■□□□□ 0.96
ATG4B-221ENST00000483778 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.07■□□□□ 0.96
ATG4B-221ENST00000483778 DNERQ8NFT8 737 aa21.07■□□□□ 0.96
ATG4B-221ENST00000483778 SYTL5Q8TDW5 730 aaPredicted RBP21.07■□□□□ 0.96
ATG4B-221ENST00000483778 SCLYQ96I15 445 aa21.07■□□□□ 0.96
ATG4B-221ENST00000483778 SENP2Q9HC62 589 aa21.07■□□□□ 0.96
ATG4B-221ENST00000483778 CTNNA3Q9UI47 895 aa21.07■□□□□ 0.96
ATG4B-221ENST00000483778 OPLAHO14841 1288 aa21.06■□□□□ 0.96
ATG4B-221ENST00000483778 TXNP10599 105 aaKnown RBP21.06■□□□□ 0.96
ATG4B-221ENST00000483778 NBPF20Q3BBV1 942 aa21.06■□□□□ 0.96
ATG4B-221ENST00000483778 CCDC178Q5BJE1 867 aa21.06■□□□□ 0.96
ATG4B-221ENST00000483778 CCDC62Q6P9F0 684 aa21.06■□□□□ 0.96
ATG4B-221ENST00000483778 PBX4Q9BYU1 374 aa21.06■□□□□ 0.96
ATG4B-221ENST00000483778 KRT23Q9C075 422 aa21.06■□□□□ 0.96
ATG4B-221ENST00000483778 ZNF576Q9H609 170 aa21.06■□□□□ 0.96
ATG4B-221ENST00000483778 PNMA2Q9UL42 364 aa21.06■□□□□ 0.96
ATG4B-221ENST00000483778 PPP1R11O60927 126 aaPredicted RBP21.05■□□□□ 0.96
ATG4B-221ENST00000483778 PARP1P09874 1014 aaKnown RBP21.05■□□□□ 0.96
ATG4B-221ENST00000483778 PPP2R5BQ15173 497 aa21.05■□□□□ 0.96
ATG4B-221ENST00000483778 ASPRV1Q53RT3 343 aa21.05■□□□□ 0.96
ATG4B-221ENST00000483778 OTOP2Q7RTS6 562 aa21.05■□□□□ 0.96
ATG4B-221ENST00000483778 SCFD2Q8WU76 684 aa21.05■□□□□ 0.96
ATG4B-221ENST00000483778 HERVK_113Q902F9 699 aa21.05■□□□□ 0.96
ATG4B-221ENST00000483778 TIFAQ96CG3 184 aa21.05■□□□□ 0.96
ATG4B-221ENST00000483778 COL25A1Q9BXS0 654 aaPredicted RBP21.05■□□□□ 0.96
ATG4B-221ENST00000483778 POLR3EQ9NVU0 708 aa21.05■□□□□ 0.96
ATG4B-221ENST00000483778 ABCB11O95342 1321 aa21.04■□□□□ 0.96
ATG4B-221ENST00000483778 A6NJR5 290 aa21.04■□□□□ 0.96
ATG4B-221ENST00000483778 FGBP02675 491 aa21.04■□□□□ 0.96
ATG4B-221ENST00000483778 FOSL2P15408 326 aa21.04■□□□□ 0.96
ATG4B-221ENST00000483778 CHMLP26374 656 aa21.04■□□□□ 0.96
ATG4B-221ENST00000483778 LY6KQ17RY6 165 aa21.04■□□□□ 0.96
ATG4B-221ENST00000483778 SEPT14Q6ZU15 432 aa21.04■□□□□ 0.96
ATG4B-221ENST00000483778 FBXO11Q86XK2 927 aa21.04■□□□□ 0.96
ATG4B-221ENST00000483778 UBAC1Q9BSL1 405 aa21.04■□□□□ 0.96
ATG4B-221ENST00000483778 MTG1Q9BT17 334 aaPredicted RBP21.04■□□□□ 0.96
ATG4B-221ENST00000483778 DHX16O60231 1041 aaKnown RBP21.03■□□□□ 0.96
ATG4B-221ENST00000483778 CYP21A2P08686 494 aa21.03■□□□□ 0.96
ATG4B-221ENST00000483778 CPT1AP50416 773 aa21.03■□□□□ 0.96
ATG4B-221ENST00000483778 IFIT1BQ5T764 474 aaKnown RBP21.03■□□□□ 0.96
ATG4B-221ENST00000483778 PSRC1Q6PGN9 363 aaPredicted RBP21.03■□□□□ 0.96
ATG4B-221ENST00000483778 USP38Q8NB14 1042 aa21.03■□□□□ 0.96
ATG4B-221ENST00000483778 CNNM2Q9H8M5 875 aa21.03■□□□□ 0.96
ATG4B-221ENST00000483778 CHD7Q9P2D1 2997 aa21.03■□□□□ 0.96
ATG4B-221ENST00000483778 MAD2L2Q9UI95 211 aa21.03■□□□□ 0.96
ATG4B-221ENST00000483778 TMEM265A0A087WTH1 108 aa21.02■□□□□ 0.96
ATG4B-221ENST00000483778 KLRF2D3W0D1 207 aa21.02■□□□□ 0.96
ATG4B-221ENST00000483778 FAM47CQ5HY64 1035 aa21.02■□□□□ 0.96
ATG4B-221ENST00000483778 CHST3Q7LGC8 479 aa21.02■□□□□ 0.96
ATG4B-221ENST00000483778 AFG1LQ8WV93 481 aa21.02■□□□□ 0.96
ATG4B-221ENST00000483778 MTMR8Q96EF0 704 aa21.02■□□□□ 0.96
ATG4B-221ENST00000483778 RMDN3Q96TC7 470 aa21.02■□□□□ 0.96
ATG4B-221ENST00000483778 SEZ6LQ9BYH1 1024 aa21.02■□□□□ 0.96
ATG4B-221ENST00000483778 YBX2Q9Y2T7 364 aaKnown RBP21.02■□□□□ 0.96
ATG4B-221ENST00000483778 PALM3A6NDB9 673 aaPredicted RBP21.01■□□□□ 0.95
ATG4B-221ENST00000483778 NKRFO15226 690 aaKnown RBP eCLIP21.01■□□□□ 0.959e-11■■□□□ 11.5
ATG4B-221ENST00000483778 EIF2AK2P19525 551 aaKnown RBP21.01■□□□□ 0.95
ATG4B-221ENST00000483778 NT5C2P49902 561 aa21.01■□□□□ 0.95
ATG4B-221ENST00000483778 RABGGTBP53611 331 aa21.01■□□□□ 0.95
ATG4B-221ENST00000483778 CHMP4BP1P59074 171 aa21.01■□□□□ 0.95
ATG4B-221ENST00000483778 ARHGAP1Q07960 439 aa21.01■□□□□ 0.95
ATG4B-221ENST00000483778 STOX1Q6ZVD7 989 aa21.01■□□□□ 0.95
ATG4B-221ENST00000483778 NSUN6Q8TEA1 469 aaKnown RBP21.01■□□□□ 0.95
ATG4B-221ENST00000483778 GPHNQ9NQX3 736 aaPredicted RBP21.01■□□□□ 0.95
ATG4B-221ENST00000483778 MRPL11Q9Y3B7 192 aaKnown RBP21.01■□□□□ 0.95
ATG4B-221ENST00000483778 CFBP00751 764 aa21■□□□□ 0.95
ATG4B-221ENST00000483778 MYOGP15173 224 aa21■□□□□ 0.95
ATG4B-221ENST00000483778 TTLL4Q14679 1199 aa21■□□□□ 0.95
ATG4B-221ENST00000483778 DEFB128Q7Z7B8 93 aa21■□□□□ 0.95
ATG4B-221ENST00000483778 ZFP91Q96JP5 570 aaPredicted RBP21■□□□□ 0.95
ATG4B-221ENST00000483778 CTAGE1Q96RT6 745 aa21■□□□□ 0.95
ATG4B-221ENST00000483778 NKX2-4Q9H2Z4 354 aa21■□□□□ 0.95
ATG4B-221ENST00000483778 PRDM12Q9H4Q4 367 aa21■□□□□ 0.95
ATG4B-221ENST00000483778 DOCK5Q9H7D0 1870 aa20.99■□□□□ 0.95
ATG4B-221ENST00000483778 COL9A3Q14050 684 aaPredicted RBP20.99■□□□□ 0.95
ATG4B-221ENST00000483778 MCF2L2Q86YR7 1114 aa20.99■□□□□ 0.95
ATG4B-221ENST00000483778 KAT2BQ92831 832 aa20.99■□□□□ 0.95
ATG4B-221ENST00000483778 MPHOSPH6Q99547 160 aaKnown RBP20.99■□□□□ 0.95
ATG4B-221ENST00000483778 PRDM6Q9NQX0 595 aa20.99■□□□□ 0.95
ATG4B-221ENST00000483778 PXMP2Q9NR77 195 aa20.99■□□□□ 0.95
ATG4B-221ENST00000483778 PTPRSQ13332 1948 aa20.99■□□□□ 0.95
ATG4B-221ENST00000483778 REV3LO60673 3130 aa20.98■□□□□ 0.95
ATG4B-221ENST00000483778 B4DLN1 442 aa20.98■□□□□ 0.95
ATG4B-221ENST00000483778 CYTH3O43739 400 aa20.98■□□□□ 0.95
ATG4B-221ENST00000483778 KPNA6O60684 536 aa20.98■□□□□ 0.95
ATG4B-221ENST00000483778 NR3C2P08235 984 aa20.98■□□□□ 0.95
ATG4B-221ENST00000483778 SUPT20HL2P0C7V6 817 aa20.98■□□□□ 0.95
ATG4B-221ENST00000483778 HOXA13P31271 388 aaPredicted RBP20.98■□□□□ 0.95
ATG4B-221ENST00000483778 HSD17B4P51659 736 aa20.98■□□□□ 0.95
ATG4B-221ENST00000483778 MRPL12P52815 198 aaKnown RBP20.98■□□□□ 0.95
ATG4B-221ENST00000483778 ADGRE1Q14246 886 aa20.98■□□□□ 0.95
ATG4B-221ENST00000483778 STXBP2Q15833 593 aa20.98■□□□□ 0.95
ATG4B-221ENST00000483778 ARHGEF16Q5VV41 709 aa20.98■□□□□ 0.95
ATG4B-221ENST00000483778 NFRKBQ6P4R8 1299 aa20.98■□□□□ 0.95
ATG4B-221ENST00000483778 IWS1Q96ST2 819 aa20.98■□□□□ 0.95
ATG4B-221ENST00000483778 AMNQ9BXJ7 453 aa20.98■□□□□ 0.95
ATG4B-221ENST00000483778 DDX41Q9UJV9 622 aaKnown RBP20.98■□□□□ 0.95
ATG4B-221ENST00000483778 VCANP13611 3396 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms