RNA–Protein interactions for RNA: ENST00000483670.5

PDCD4-208, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-208ENST00000483670 PXMP2Q9NR77 195 aa29.77■■■□□ 2.36
PDCD4-208ENST00000483670 SYNRGQ9UMZ2 1314 aa29.76■■■□□ 2.36
PDCD4-208ENST00000483670 RBM47A0AV96 593 aaKnown RBP29.76■■■□□ 2.35
PDCD4-208ENST00000483670 ADAMTS4O75173 837 aa29.76■■■□□ 2.35
PDCD4-208ENST00000483670 SEC24BO95487 1268 aa29.76■■■□□ 2.35
PDCD4-208ENST00000483670 ADD1P35611 737 aaKnown RBP29.76■■■□□ 2.35
PDCD4-208ENST00000483670 ADCYAP1R1P41586 468 aa29.76■■■□□ 2.35
PDCD4-208ENST00000483670 PPP1R18Q6NYC8 613 aa29.76■■■□□ 2.35
PDCD4-208ENST00000483670 UPF3AQ9H1J1 476 aaKnown RBP29.76■■■□□ 2.35
PDCD4-208ENST00000483670 PGK1P00558 417 aa29.75■■■□□ 2.35
PDCD4-208ENST00000483670 MYCNP04198 464 aaPredicted RBP29.75■■■□□ 2.35
PDCD4-208ENST00000483670 CST5P28325 142 aaPredicted RBP29.75■■■□□ 2.35
PDCD4-208ENST00000483670 HOXA13P31271 388 aaPredicted RBP29.75■■■□□ 2.35
PDCD4-208ENST00000483670 GJA9P57773 515 aa29.75■■■□□ 2.35
PDCD4-208ENST00000483670 NOL8Q76FK4 1167 aaKnown RBP29.75■■■□□ 2.35
PDCD4-208ENST00000483670 HEATR3Q7Z4Q2 680 aa29.75■■■□□ 2.35
PDCD4-208ENST00000483670 SCFD2Q8WU76 684 aa29.75■■■□□ 2.35
PDCD4-208ENST00000483670 DPF3Q92784 378 aa29.75■■■□□ 2.35
PDCD4-208ENST00000483670 V9GY48 417 aaPredicted RBP29.75■■■□□ 2.35
PDCD4-208ENST00000483670 NKRFO15226 690 aaKnown RBP eCLIP29.74■■■□□ 2.35
PDCD4-208ENST00000483670 NKX3-2P78367 333 aa29.74■■■□□ 2.35
PDCD4-208ENST00000483670 DUSP28Q4G0W2 176 aa29.74■■■□□ 2.35
PDCD4-208ENST00000483670 PCSK9Q8NBP7 692 aaKnown RBP29.74■■■□□ 2.35
PDCD4-208ENST00000483670 SMARCC2Q8TAQ2 1214 aa29.74■■■□□ 2.35
PDCD4-208ENST00000483670 PSTPIP2Q9H939 334 aa29.74■■■□□ 2.35
PDCD4-208ENST00000483670 GNEQ9Y223 722 aaKnown RBP29.74■■■□□ 2.35
PDCD4-208ENST00000483670 hCG_1642624A0A1W2PR95 340 aa29.73■■■□□ 2.35
PDCD4-208ENST00000483670 EIF3JO75822 258 aaKnown RBP29.73■■■□□ 2.35
PDCD4-208ENST00000483670 NR3C2P08235 984 aa29.73■■■□□ 2.35
PDCD4-208ENST00000483670 EIF2AK2P19525 551 aaKnown RBP29.73■■■□□ 2.35
PDCD4-208ENST00000483670 AKAP17AQ02040 695 aaKnown RBP29.73■■■□□ 2.35
PDCD4-208ENST00000483670 KLHDC9Q8NEP7 349 aa29.73■■■□□ 2.35
PDCD4-208ENST00000483670 LENG1Q96BZ8 264 aaPredicted RBP29.73■■■□□ 2.35
PDCD4-208ENST00000483670 PDCD2LQ9BRP1 358 aa29.73■■■□□ 2.35
PDCD4-208ENST00000483670 WDR11Q9BZH6 1224 aa29.73■■■□□ 2.35
PDCD4-208ENST00000483670 SENP6Q9GZR1 1112 aaPredicted RBP29.73■■■□□ 2.35
PDCD4-208ENST00000483670 AP5M1Q9H0R1 490 aa29.73■■■□□ 2.35
PDCD4-208ENST00000483670 GLT8D2Q9H1C3 349 aa29.73■■■□□ 2.35
PDCD4-208ENST00000483670 PDGFCQ9NRA1 345 aa29.73■■■□□ 2.35
PDCD4-208ENST00000483670 PHF24Q9UPV7 400 aa29.73■■■□□ 2.35
PDCD4-208ENST00000483670 NR2E3Q9Y5X4 410 aa29.73■■■□□ 2.35
PDCD4-208ENST00000483670 DDX49Q9Y6V7 483 aaKnown RBP29.73■■■□□ 2.35
PDCD4-208ENST00000483670 MOXD2PA6NHM9 499 aa29.72■■■□□ 2.35
PDCD4-208ENST00000483670 ADCY6O43306 1168 aa29.72■■■□□ 2.35
PDCD4-208ENST00000483670 C6orf222P0C671 652 aaPredicted RBP29.72■■■□□ 2.35
PDCD4-208ENST00000483670 SMPD1P17405 629 aa29.72■■■□□ 2.35
PDCD4-208ENST00000483670 TTLL4Q14679 1199 aa29.72■■■□□ 2.35
PDCD4-208ENST00000483670 CPLX2Q6PUV4 134 aaKnown RBP29.72■■■□□ 2.35
PDCD4-208ENST00000483670 RNF26Q9BY78 433 aaPredicted RBP29.72■■■□□ 2.35
PDCD4-208ENST00000483670 KIAA1217Q5T5P2 1943 aa29.72■■■□□ 2.35
PDCD4-208ENST00000483670 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.71■■■□□ 2.35
PDCD4-208ENST00000483670 PRPF3O43395 683 aaKnown RBP29.71■■■□□ 2.35
PDCD4-208ENST00000483670 EVI5O60447 810 aa29.71■■■□□ 2.35
PDCD4-208ENST00000483670 IFNAR1P17181 557 aa29.71■■■□□ 2.35
PDCD4-208ENST00000483670 WWC2Q6AWC2 1192 aa29.71■■■□□ 2.35
PDCD4-208ENST00000483670 TLK2Q86UE8 772 aa29.71■■■□□ 2.35
PDCD4-208ENST00000483670 FCHSD1Q86WN1 690 aa29.71■■■□□ 2.35
PDCD4-208ENST00000483670 BARHL2Q9NY43 387 aa29.71■■■□□ 2.35
PDCD4-208ENST00000483670 FRMPD4Q14CM0 1322 aa29.71■■■□□ 2.35
PDCD4-208ENST00000483670 MEIS2O14770 477 aa29.7■■■□□ 2.35
PDCD4-208ENST00000483670 STAM2O75886 525 aa29.7■■■□□ 2.35
PDCD4-208ENST00000483670 NAPAP54920 295 aa29.7■■■□□ 2.35
PDCD4-208ENST00000483670 PGM5Q15124 567 aa29.7■■■□□ 2.35
PDCD4-208ENST00000483670 PFKFB3Q16875 520 aaPredicted RBP29.7■■■□□ 2.35
PDCD4-208ENST00000483670 CCDC12Q8WUD4 166 aaPredicted RBP29.7■■■□□ 2.35
PDCD4-208ENST00000483670 GPKOWQ92917 476 aaPredicted RBP eCLIP29.7■■■□□ 2.35
PDCD4-208ENST00000483670 CPLX1O14810 134 aa29.69■■■□□ 2.34
PDCD4-208ENST00000483670 ZEB2O60315 1214 aa29.69■■■□□ 2.34
PDCD4-208ENST00000483670 CCND2P30279 289 aa29.69■■■□□ 2.34
PDCD4-208ENST00000483670 CCT2P78371 535 aaKnown RBP29.69■■■□□ 2.34
PDCD4-208ENST00000483670 NTRK3Q16288 839 aa29.69■■■□□ 2.34
PDCD4-208ENST00000483670 GNASQ5JWF2 1037 aa29.69■■■□□ 2.34
PDCD4-208ENST00000483670 PRPF38BQ5VTL8 546 aaKnown RBP29.69■■■□□ 2.34
PDCD4-208ENST00000483670 XRRA1Q6P2D8 792 aa29.69■■■□□ 2.34
PDCD4-208ENST00000483670 KCNV1Q6PIU1 500 aa29.69■■■□□ 2.34
PDCD4-208ENST00000483670 VSIG10LQ86VR7 867 aa29.69■■■□□ 2.34
PDCD4-208ENST00000483670 UPF2Q9HAU5 1272 aaKnown RBP29.69■■■□□ 2.34
PDCD4-208ENST00000483670 SCG2P13521 617 aa29.68■■■□□ 2.34
PDCD4-208ENST00000483670 CCSAPQ6IQ19 270 aaPredicted RBP29.68■■■□□ 2.34
PDCD4-208ENST00000483670 USP17L6PQ6QN14 398 aa29.68■■■□□ 2.34
PDCD4-208ENST00000483670 TRIM22Q8IYM9 498 aa29.68■■■□□ 2.34
PDCD4-208ENST00000483670 ALPK3Q96L96 1907 aa29.67■■■□□ 2.34
PDCD4-208ENST00000483670 SPDYE3A6NKU9 549 aa29.67■■■□□ 2.34
PDCD4-208ENST00000483670 DYNC1LI2O43237 492 aaPredicted RBP29.67■■■□□ 2.34
PDCD4-208ENST00000483670 TXNP10599 105 aaKnown RBP29.67■■■□□ 2.34
PDCD4-208ENST00000483670 ACLYP53396 1101 aa29.67■■■□□ 2.34
PDCD4-208ENST00000483670 KCNA10Q16322 511 aa29.67■■■□□ 2.34
PDCD4-208ENST00000483670 BRDTQ58F21 947 aaPredicted RBP29.67■■■□□ 2.34
PDCD4-208ENST00000483670 C1orf53Q5VUE5 145 aa29.67■■■□□ 2.34
PDCD4-208ENST00000483670 EHMT1Q9H9B1 1298 aa29.67■■■□□ 2.34
PDCD4-208ENST00000483670 RIC8AQ9NPQ8 531 aa29.67■■■□□ 2.34
PDCD4-208ENST00000483670 STXBP3O00186 592 aa29.66■■■□□ 2.34
PDCD4-208ENST00000483670 CDKL5O76039 1030 aa29.66■■■□□ 2.34
PDCD4-208ENST00000483670 MYCLP12524 364 aaPredicted RBP29.66■■■□□ 2.34
PDCD4-208ENST00000483670 NEK4P51957 841 aa29.66■■■□□ 2.34
PDCD4-208ENST00000483670 FSCN1Q16658 493 aaKnown RBP29.66■■■□□ 2.34
PDCD4-208ENST00000483670 SEPT14Q6ZU15 432 aa29.66■■■□□ 2.34
PDCD4-208ENST00000483670 GLT1D1Q96MS3 346 aa29.66■■■□□ 2.34
PDCD4-208ENST00000483670 A0A1W2PQ45 241 aaPredicted RBP29.65■■■□□ 2.34
PDCD4-208ENST00000483670 A0A1W2PQY0 241 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms