RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 CRNKL1Q9BZJ0 848 aaKnown RBP7.09□□□□□ -1.27
CSDE1-207ENST00000483407 SENP6Q9GZR1 1112 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-207ENST00000483407 RPAP3Q9H6T3 665 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-207ENST00000483407 SLC5A4Q9NY91 659 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 HOXC10Q9NYD6 342 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 LRFN2Q9ULH4 789 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 STXBP5LQ9Y2K9 1186 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 MEN1O00255 615 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 DNM1LO00429 736 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 MPHOSPH10O00566 681 aaKnown RBP7.08□□□□□ -1.28
CSDE1-207ENST00000483407 STRNO43815 780 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 SMPD1P17405 629 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 SHMT1P34896 483 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 PLCD1P51178 756 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 PRR20EP86478 221 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 PRR20CP86479 221 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 PRR20DP86480 221 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 PRR20BP86481 221 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 PRR20AP86496 221 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 COG2Q14746 738 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 COL19A1Q14993 1142 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 SEPT2Q15019 361 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 SLC9C2Q5TAH2 1124 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 ALKBH2Q6NS38 261 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 CEP85Q6P2H3 762 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 Q7L0L9 218 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 MB21D1Q8N884 522 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 ARRDC4Q8NCT1 418 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 NPLOC4Q8TAT6 608 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 RIOK1Q9BRS2 568 aaKnown RBP7.08□□□□□ -1.28
CSDE1-207ENST00000483407 TANGO6Q9C0B7 1094 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 ANTXR1Q9H6X2 564 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 SH2D4AQ9H788 454 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 MTMR10Q9NXD2 777 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 MCM9Q9NXL9 1143 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 FLRT1Q9NZU1 646 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 BTBD7Q9P203 1132 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 EXOC6BQ9Y2D4 811 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 MAST2Q6P0Q8 1798 aa7.08□□□□□ -1.28
CSDE1-207ENST00000483407 KBTBD13C9JR72 458 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 WIPF1O43516 503 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 PDE6AP16499 860 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 ADORA2AP29274 412 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 CYP2C19P33261 490 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 GUCY1A2P33402 732 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 GPC1P35052 558 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 EIF1AXP47813 144 aaKnown RBP7.07□□□□□ -1.28
CSDE1-207ENST00000483407 RELBQ01201 579 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 GABPAQ06546 454 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 SH3PXD2AQ5TCZ1 1133 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 OLFML2BQ68BL8 750 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 TMEM179Q6ZVK1 233 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 AMOTL1Q8IY63 956 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 ALDH16A1Q8IZ83 802 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 CLASRPQ8N2M8 674 aaKnown RBP7.07□□□□□ -1.28
CSDE1-207ENST00000483407 MEIOBQ8N635 442 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 SHCBP1Q8NEM2 672 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 CITED4Q96RK1 184 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 ZSCAN10Q96SZ4 725 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-207ENST00000483407 DNAJC2Q99543 621 aaKnown RBP7.07□□□□□ -1.28
CSDE1-207ENST00000483407 MOV10L1Q9BXT6 1211 aaKnown RBP7.07□□□□□ -1.28
CSDE1-207ENST00000483407 GRIP2Q9C0E4 1043 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 SPATC1LQ9H0A9 340 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 MROH8Q9H579 483 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 ZNF395Q9H8N7 513 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-207ENST00000483407 SWAP70Q9UH65 585 aa7.07□□□□□ -1.28
CSDE1-207ENST00000483407 DOCK3Q8IZD9 2030 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 VCANP13611 3396 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 ATAD5Q96QE3 1844 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 ZNF532Q9HCE3 1301 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 A0A1W2PRG0 241 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 GOLIM4O00461 696 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 SEPT4O43236 478 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 NDUFB5O43674 189 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 HMMRO75330 724 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 WFS1O76024 890 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 IFIT2P09913 472 aaKnown RBP7.06□□□□□ -1.28
CSDE1-207ENST00000483407 RLBP1P12271 317 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 CYBAP13498 195 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 BRD2P25440 801 aaKnown RBP7.06□□□□□ -1.28
CSDE1-207ENST00000483407 RTP1P59025 263 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 HNRNPUQ00839 825 aaKnown RBP eCLIP7.06□□□□□ -1.28
CSDE1-207ENST00000483407 ICA1Q05084 483 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 PLS1Q14651 629 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 RTN1Q16799 776 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 FAM109BQ6ICB4 259 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-207ENST00000483407 TRIM67Q6ZTA4 783 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 NCAPG2Q86XI2 1143 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 RHPN1Q8TCX5 695 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 RHBDD1Q8TEB9 315 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 GIPC2Q8TF65 315 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.06□□□□□ -1.28
CSDE1-207ENST00000483407 SDR42E1Q8WUS8 393 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 KIF1BPQ96EK5 621 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 CCDC17Q96LX7 622 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 NIFKQ9BYG3 293 aaKnown RBP7.06□□□□□ -1.28
CSDE1-207ENST00000483407 IL1RAPL2Q9NP60 686 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 DCP1AQ9NPI6 582 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-207ENST00000483407 ATP11BQ9Y2G3 1177 aa7.06□□□□□ -1.28
CSDE1-207ENST00000483407 DDX60LQ5H9U9 1706 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms