RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 GNASQ5JWF2 1037 aa21.2■□□□□ 0.98
SMIM4-204ENST00000482728 HEATR3Q7Z4Q2 680 aa21.2■□□□□ 0.98
SMIM4-204ENST00000482728 FERMT2Q96AC1 680 aa21.2■□□□□ 0.98
SMIM4-204ENST00000482728 WDR11Q9BZH6 1224 aa21.2■□□□□ 0.98
SMIM4-204ENST00000482728 PXMP2Q9NR77 195 aa21.2■□□□□ 0.98
SMIM4-204ENST00000482728 FAM217BQ9NTX9 383 aaPredicted RBP21.2■□□□□ 0.98
SMIM4-204ENST00000482728 FRMPD3Q5JV73 1810 aa21.2■□□□□ 0.98
SMIM4-204ENST00000482728 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.19■□□□□ 0.98
SMIM4-204ENST00000482728 DYNC1LI2O43237 492 aaPredicted RBP21.19■□□□□ 0.98
SMIM4-204ENST00000482728 ADCY6O43306 1168 aa21.19■□□□□ 0.98
SMIM4-204ENST00000482728 ADAMTS4O75173 837 aa21.19■□□□□ 0.98
SMIM4-204ENST00000482728 NR3C2P08235 984 aa21.19■□□□□ 0.98
SMIM4-204ENST00000482728 SMPD1P17405 629 aa21.19■□□□□ 0.98
SMIM4-204ENST00000482728 GJA9P57773 515 aa21.19■□□□□ 0.98
SMIM4-204ENST00000482728 PRPF38BQ5VTL8 546 aaKnown RBP21.19■□□□□ 0.98
SMIM4-204ENST00000482728 PCSK9Q8NBP7 692 aaKnown RBP21.19■□□□□ 0.98
SMIM4-204ENST00000482728 SMARCC2Q8TAQ2 1214 aa21.19■□□□□ 0.98
SMIM4-204ENST00000482728 SCFD2Q8WU76 684 aa21.19■□□□□ 0.98
SMIM4-204ENST00000482728 TSEN34Q9BSV6 310 aaKnown RBP21.19■□□□□ 0.98
SMIM4-204ENST00000482728 PSTPIP2Q9H939 334 aa21.19■□□□□ 0.98
SMIM4-204ENST00000482728 EIF3JO75822 258 aaKnown RBP21.18■□□□□ 0.98
SMIM4-204ENST00000482728 SEC24BO95487 1268 aa21.18■□□□□ 0.98
SMIM4-204ENST00000482728 PDIA3P30101 505 aaKnown RBP21.18■□□□□ 0.98
SMIM4-204ENST00000482728 ATN1P54259 1190 aaPredicted RBP21.18■□□□□ 0.98
SMIM4-204ENST00000482728 EVCP57679 992 aa21.18■□□□□ 0.98
SMIM4-204ENST00000482728 FUT2Q10981 343 aa21.18■□□□□ 0.98
SMIM4-204ENST00000482728 KLHDC9Q8NEP7 349 aa21.18■□□□□ 0.98
SMIM4-204ENST00000482728 UPF3AQ9H1J1 476 aaKnown RBP21.18■□□□□ 0.98
SMIM4-204ENST00000482728 PHF24Q9UPV7 400 aa21.18■□□□□ 0.98
SMIM4-204ENST00000482728 Q9Y3F1 56 aa21.18■□□□□ 0.98
SMIM4-204ENST00000482728 CNTNAP5Q8WYK1 1306 aa21.18■□□□□ 0.98
SMIM4-204ENST00000482728 RBM47A0AV96 593 aaKnown RBP21.17■□□□□ 0.98
SMIM4-204ENST00000482728 MYCLP12524 364 aaPredicted RBP21.17■□□□□ 0.98
SMIM4-204ENST00000482728 AKAP17AQ02040 695 aaKnown RBP21.17■□□□□ 0.98
SMIM4-204ENST00000482728 TOB2Q14106 344 aaPredicted RBP21.17■□□□□ 0.98
SMIM4-204ENST00000482728 KCNA10Q16322 511 aa21.17■□□□□ 0.98
SMIM4-204ENST00000482728 DUSP28Q4G0W2 176 aa21.17■□□□□ 0.98
SMIM4-204ENST00000482728 SEPT14Q6ZU15 432 aa21.17■□□□□ 0.98
SMIM4-204ENST00000482728 TLK2Q86UE8 772 aa21.17■□□□□ 0.98
SMIM4-204ENST00000482728 GNEQ9Y223 722 aaKnown RBP21.17■□□□□ 0.98
SMIM4-204ENST00000482728 H0YGN5 161 aa21.16■□□□□ 0.98
SMIM4-204ENST00000482728 ACLYP53396 1101 aa21.16■□□□□ 0.98
SMIM4-204ENST00000482728 CCT2P78371 535 aaKnown RBP21.16■□□□□ 0.98
SMIM4-204ENST00000482728 TTLL4Q14679 1199 aa21.16■□□□□ 0.98
SMIM4-204ENST00000482728 LRRC26Q2I0M4 334 aa21.16■□□□□ 0.98
SMIM4-204ENST00000482728 USP17L6PQ6QN14 398 aa21.16■□□□□ 0.98
SMIM4-204ENST00000482728 C7orf61Q8IZ16 206 aa21.16■□□□□ 0.98
SMIM4-204ENST00000482728 GPKOWQ92917 476 aaPredicted RBP eCLIP21.16■□□□□ 0.98
SMIM4-204ENST00000482728 VTI1AQ96AJ9 217 aa21.16■□□□□ 0.98
SMIM4-204ENST00000482728 ZNF274Q96GC6 653 aaPredicted RBP21.16■□□□□ 0.98
SMIM4-204ENST00000482728 PDCD2LQ9BRP1 358 aa21.16■□□□□ 0.98
SMIM4-204ENST00000482728 LARP6Q9BRS8 491 aaKnown RBP21.16■□□□□ 0.98
SMIM4-204ENST00000482728 MYADML2A6NDP7 307 aa21.15■□□□□ 0.98
SMIM4-204ENST00000482728 MOXD2PA6NHM9 499 aa21.15■□□□□ 0.98
SMIM4-204ENST00000482728 PIK3CDO00329 1044 aa21.15■□□□□ 0.98
SMIM4-204ENST00000482728 NKRFO15226 690 aaKnown RBP eCLIP21.15■□□□□ 0.98
SMIM4-204ENST00000482728 ZEB2O60315 1214 aa21.15■□□□□ 0.98
SMIM4-204ENST00000482728 TXNP10599 105 aaKnown RBP21.15■□□□□ 0.98
SMIM4-204ENST00000482728 CST5P28325 142 aaPredicted RBP21.15■□□□□ 0.98
SMIM4-204ENST00000482728 CCND2P30279 289 aa21.15■□□□□ 0.98
SMIM4-204ENST00000482728 NAPAP54920 295 aa21.15■□□□□ 0.98
SMIM4-204ENST00000482728 FSCN1Q16658 493 aaKnown RBP21.15■□□□□ 0.98
SMIM4-204ENST00000482728 TMEM63BQ5T3F8 832 aa21.15■□□□□ 0.98
SMIM4-204ENST00000482728 SLC39A5Q6ZMH5 540 aa21.15■□□□□ 0.98
SMIM4-204ENST00000482728 RBM27Q9P2N5 1060 aaKnown RBP21.15■□□□□ 0.98
SMIM4-204ENST00000482728 hCG_1984214I3L0E3 225 aa21.14■□□□□ 0.97
SMIM4-204ENST00000482728 IRX5P78411 483 aaPredicted RBP21.14■□□□□ 0.97
SMIM4-204ENST00000482728 BEX3Q00994 111 aa21.14■□□□□ 0.97
SMIM4-204ENST00000482728 PGM5Q15124 567 aa21.14■□□□□ 0.97
SMIM4-204ENST00000482728 WWC2Q6AWC2 1192 aa21.14■□□□□ 0.97
SMIM4-204ENST00000482728 VSIG10LQ86VR7 867 aa21.14■□□□□ 0.97
SMIM4-204ENST00000482728 ZNF713Q8N859 430 aaPredicted RBP21.14■□□□□ 0.97
SMIM4-204ENST00000482728 GLT1D1Q96MS3 346 aa21.14■□□□□ 0.97
SMIM4-204ENST00000482728 NCOA5Q9HCD5 579 aaKnown RBP21.14■□□□□ 0.97
SMIM4-204ENST00000482728 A0A1W2PQ45 241 aaPredicted RBP21.13■□□□□ 0.97
SMIM4-204ENST00000482728 A0A1W2PQY0 241 aa21.13■□□□□ 0.97
SMIM4-204ENST00000482728 MEIS2O14770 477 aa21.13■□□□□ 0.97
SMIM4-204ENST00000482728 CPLX1O14810 134 aa21.13■□□□□ 0.97
SMIM4-204ENST00000482728 PRPF3O43395 683 aaKnown RBP21.13■□□□□ 0.97
SMIM4-204ENST00000482728 ASGR1P07306 291 aa21.13■□□□□ 0.97
SMIM4-204ENST00000482728 NKX3-2P78367 333 aa21.13■□□□□ 0.97
SMIM4-204ENST00000482728 ANKRD1Q15327 319 aa21.13■□□□□ 0.97
SMIM4-204ENST00000482728 C8orf34Q49A92 452 aa21.13■□□□□ 0.97
SMIM4-204ENST00000482728 BRDTQ58F21 947 aaPredicted RBP21.13■□□□□ 0.97
SMIM4-204ENST00000482728 CCSAPQ6IQ19 270 aaPredicted RBP21.13■□□□□ 0.97
SMIM4-204ENST00000482728 CPLX2Q6PUV4 134 aaKnown RBP21.13■□□□□ 0.97
SMIM4-204ENST00000482728 OR6J1Q8NGC5 347 aa21.13■□□□□ 0.97
SMIM4-204ENST00000482728 ALDH8A1Q9H2A2 487 aaPredicted RBP21.13■□□□□ 0.97
SMIM4-204ENST00000482728 STARD7Q9NQZ5 370 aa21.13■□□□□ 0.97
SMIM4-204ENST00000482728 ATP11BQ9Y2G3 1177 aa21.13■□□□□ 0.97
SMIM4-204ENST00000482728 NID2Q14112 1375 aa21.12■□□□□ 0.97
SMIM4-204ENST00000482728 SPDYE3A6NKU9 549 aa21.12■□□□□ 0.97
SMIM4-204ENST00000482728 CTAGE5O15320 804 aa21.12■□□□□ 0.97
SMIM4-204ENST00000482728 SCG2P13521 617 aa21.12■□□□□ 0.97
SMIM4-204ENST00000482728 PTGS1P23219 599 aa21.12■□□□□ 0.97
SMIM4-204ENST00000482728 RTP1P59025 263 aa21.12■□□□□ 0.97
SMIM4-204ENST00000482728 STK3Q13188 491 aa21.12■□□□□ 0.97
SMIM4-204ENST00000482728 PFKFB3Q16875 520 aaPredicted RBP21.12■□□□□ 0.97
SMIM4-204ENST00000482728 PPP1R18Q6NYC8 613 aa21.12■□□□□ 0.97
SMIM4-204ENST00000482728 PHKBQ93100 1093 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms