RNA–Protein interactions for RNA: ENST00000482424.1

CLIP2-205, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 5

Gene CLIP2, Length 971 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-205ENST00000482424 DYNC1LI2O43237 492 aaPredicted RBP23.2■■□□□ 1.3
CLIP2-205ENST00000482424 PTGS1P23219 599 aa23.2■■□□□ 1.3
CLIP2-205ENST00000482424 BMP8BP34820 402 aa23.2■■□□□ 1.3
CLIP2-205ENST00000482424 TRIM60Q495X7 471 aa23.2■■□□□ 1.3
CLIP2-205ENST00000482424 SYNE3Q6ZMZ3 975 aa23.2■■□□□ 1.3
CLIP2-205ENST00000482424 TMTC3Q6ZXV5 915 aa23.2■■□□□ 1.3
CLIP2-205ENST00000482424 FBXL16Q8N461 479 aa23.2■■□□□ 1.3
CLIP2-205ENST00000482424 USP26Q9BXU7 913 aa23.2■■□□□ 1.3
CLIP2-205ENST00000482424 AP5M1Q9H0R1 490 aa23.2■■□□□ 1.3
CLIP2-205ENST00000482424 STARD7Q9NQZ5 370 aa23.2■■□□□ 1.3
CLIP2-205ENST00000482424 PXMP2Q9NR77 195 aa23.2■■□□□ 1.3
CLIP2-205ENST00000482424 ATP11BQ9Y2G3 1177 aa23.2■■□□□ 1.3
CLIP2-205ENST00000482424 NKRFO15226 690 aaKnown RBP eCLIP23.19■■□□□ 1.3
CLIP2-205ENST00000482424 BEX3Q00994 111 aa23.19■■□□□ 1.3
CLIP2-205ENST00000482424 STXBP2Q15833 593 aa23.19■■□□□ 1.3
CLIP2-205ENST00000482424 ARHGEF16Q5VV41 709 aa23.19■■□□□ 1.3
CLIP2-205ENST00000482424 MICU3Q86XE3 530 aa23.19■■□□□ 1.3
CLIP2-205ENST00000482424 RAB11FIP4Q86YS3 637 aa23.19■■□□□ 1.3
CLIP2-205ENST00000482424 CMTR1Q8N1G2 835 aaKnown RBP23.19■■□□□ 1.3
CLIP2-205ENST00000482424 SCFD2Q8WU76 684 aa23.19■■□□□ 1.3
CLIP2-205ENST00000482424 GLT1D1Q96MS3 346 aa23.19■■□□□ 1.3
CLIP2-205ENST00000482424 JAKMIP1Q96N16 626 aaKnown RBP23.19■■□□□ 1.3
CLIP2-205ENST00000482424 GCOM1H8Y6P7 765 aaPredicted RBP23.18■■□□□ 1.3
CLIP2-205ENST00000482424 POLR2MP0CAP2 368 aa23.18■■□□□ 1.3
CLIP2-205ENST00000482424 CPA1P15085 419 aa23.18■■□□□ 1.3
CLIP2-205ENST00000482424 RCAN1P53805 252 aa23.18■■□□□ 1.3
CLIP2-205ENST00000482424 FSCN1Q16658 493 aaKnown RBP23.18■■□□□ 1.3
CLIP2-205ENST00000482424 ANKRD33Q7Z3H0 272 aa23.18■■□□□ 1.3
CLIP2-205ENST00000482424 PIBF1Q8WXW3 757 aa23.18■■□□□ 1.3
CLIP2-205ENST00000482424 RBM28Q9NW13 759 aaKnown RBP23.18■■□□□ 1.3
CLIP2-205ENST00000482424 SEC63Q9UGP8 760 aaKnown RBP23.18■■□□□ 1.3
CLIP2-205ENST00000482424 RANBP2P49792 3224 aaKnown RBP23.18■■□□□ 1.3
CLIP2-205ENST00000482424 KIAA1217Q5T5P2 1943 aa23.18■■□□□ 1.3
CLIP2-205ENST00000482424 ZBTB43O43298 467 aa23.17■■□□□ 1.3
CLIP2-205ENST00000482424 NR3C2P08235 984 aa23.17■■□□□ 1.3
CLIP2-205ENST00000482424 EIF2AK2P19525 551 aaKnown RBP23.17■■□□□ 1.3
CLIP2-205ENST00000482424 HOXA13P31271 388 aaPredicted RBP23.17■■□□□ 1.3
CLIP2-205ENST00000482424 CDK7P50613 346 aa23.17■■□□□ 1.3
CLIP2-205ENST00000482424 TLE2Q04725 743 aa23.17■■□□□ 1.3
CLIP2-205ENST00000482424 CCDC62Q6P9F0 684 aa23.17■■□□□ 1.3
CLIP2-205ENST00000482424 BLOC1S2Q6QNY1 142 aa23.17■■□□□ 1.3
CLIP2-205ENST00000482424 TOX2Q96NM4 488 aa23.17■■□□□ 1.3
CLIP2-205ENST00000482424 PDCD2LQ9BRP1 358 aa23.17■■□□□ 1.3
CLIP2-205ENST00000482424 AGXT2Q9BYV1 514 aa23.17■■□□□ 1.3
CLIP2-205ENST00000482424 A0A1W2PPC1 479 aa23.16■■□□□ 1.3
CLIP2-205ENST00000482424 ZEB2O60315 1214 aa23.16■■□□□ 1.3
CLIP2-205ENST00000482424 EIF3JO75822 258 aaKnown RBP23.16■■□□□ 1.3
CLIP2-205ENST00000482424 CABYRO75952 493 aa23.16■■□□□ 1.3
CLIP2-205ENST00000482424 RPS6KB1P23443 525 aa23.16■■□□□ 1.3
CLIP2-205ENST00000482424 PSMA5P28066 241 aa23.16■■□□□ 1.3
CLIP2-205ENST00000482424 MAGEA10P43363 369 aaPredicted RBP23.16■■□□□ 1.3
CLIP2-205ENST00000482424 FUT2Q10981 343 aa23.16■■□□□ 1.3
CLIP2-205ENST00000482424 PPP2R5BQ15173 497 aa23.16■■□□□ 1.3
CLIP2-205ENST00000482424 PDLIM7Q9NR12 457 aa23.16■■□□□ 1.3
CLIP2-205ENST00000482424 FAM217BQ9NTX9 383 aaPredicted RBP23.16■■□□□ 1.3
CLIP2-205ENST00000482424 KLF18A0A0U1RQI7 1052 aa23.15■■□□□ 1.3
CLIP2-205ENST00000482424 ARIH2O95376 493 aa23.15■■□□□ 1.3
CLIP2-205ENST00000482424 TXNP10599 105 aaKnown RBP23.15■■□□□ 1.3
CLIP2-205ENST00000482424 TTLL4Q14679 1199 aa23.15■■□□□ 1.3
CLIP2-205ENST00000482424 Q6ZUG5 572 aa23.15■■□□□ 1.3
CLIP2-205ENST00000482424 VSIG10LQ86VR7 867 aa23.15■■□□□ 1.3
CLIP2-205ENST00000482424 CCDC82Q8N4S0 544 aa23.15■■□□□ 1.3
CLIP2-205ENST00000482424 FRMPD4Q14CM0 1322 aa23.14■■□□□ 1.3
CLIP2-205ENST00000482424 A0A0U1RQG5 324 aaPredicted RBP23.14■■□□□ 1.29
CLIP2-205ENST00000482424 PIK3CDO00329 1044 aa23.14■■□□□ 1.29
CLIP2-205ENST00000482424 PGM5Q15124 567 aa23.14■■□□□ 1.29
CLIP2-205ENST00000482424 RTN1Q16799 776 aa23.14■■□□□ 1.29
CLIP2-205ENST00000482424 CXCL17Q6UXB2 119 aa23.14■■□□□ 1.29
CLIP2-205ENST00000482424 SLC43A3Q8NBI5 491 aa23.14■■□□□ 1.29
CLIP2-205ENST00000482424 OR6J1Q8NGC5 347 aa23.14■■□□□ 1.29
CLIP2-205ENST00000482424 PRKAG2Q9UGJ0 569 aa23.14■■□□□ 1.29
CLIP2-205ENST00000482424 CNTNAP5Q8WYK1 1306 aa23.13■■□□□ 1.29
CLIP2-205ENST00000482424 LTBP2Q14767 1821 aa23.13■■□□□ 1.29
CLIP2-205ENST00000482424 TRIM43BA6NCK2 446 aa23.13■■□□□ 1.29
CLIP2-205ENST00000482424 ARVCFO00192 962 aa23.13■■□□□ 1.29
CLIP2-205ENST00000482424 MEIS2O14770 477 aa23.13■■□□□ 1.29
CLIP2-205ENST00000482424 CPT1AP50416 773 aa23.13■■□□□ 1.29
CLIP2-205ENST00000482424 SH3RF1Q7Z6J0 888 aa23.13■■□□□ 1.29
CLIP2-205ENST00000482424 COPS5Q92905 334 aa23.13■■□□□ 1.29
CLIP2-205ENST00000482424 TRIM43Q96BQ3 446 aaPredicted RBP23.13■■□□□ 1.29
CLIP2-205ENST00000482424 ZSWIM6Q9HCJ5 1215 aa23.13■■□□□ 1.29
CLIP2-205ENST00000482424 MROH7Q68CQ1 1323 aa23.12■■□□□ 1.29
CLIP2-205ENST00000482424 TRIOBPQ9H2D6 2365 aa23.12■■□□□ 1.29
CLIP2-205ENST00000482424 A6NJR5 290 aa23.12■■□□□ 1.29
CLIP2-205ENST00000482424 RGS20O76081 388 aa23.12■■□□□ 1.29
CLIP2-205ENST00000482424 CLTBP09497 229 aa23.12■■□□□ 1.29
CLIP2-205ENST00000482424 CASTP20810 708 aaKnown RBP23.12■■□□□ 1.29
CLIP2-205ENST00000482424 CDC27P30260 824 aa23.12■■□□□ 1.29
CLIP2-205ENST00000482424 FGD1P98174 961 aa23.12■■□□□ 1.29
CLIP2-205ENST00000482424 APOBRQ0VD83 1088 aa23.12■■□□□ 1.29
CLIP2-205ENST00000482424 FAAP100Q0VG06 881 aa23.12■■□□□ 1.29
CLIP2-205ENST00000482424 SEPT14Q6ZU15 432 aa23.12■■□□□ 1.29
CLIP2-205ENST00000482424 FCHSD1Q86WN1 690 aa23.12■■□□□ 1.29
CLIP2-205ENST00000482424 BRF1Q92994 677 aa23.12■■□□□ 1.29
CLIP2-205ENST00000482424 VTI1AQ96AJ9 217 aa23.12■■□□□ 1.29
CLIP2-205ENST00000482424 SEZ6LQ9BYH1 1024 aa23.12■■□□□ 1.29
CLIP2-205ENST00000482424 TM6SF1Q9BZW5 370 aa23.12■■□□□ 1.29
CLIP2-205ENST00000482424 POLR3EQ9NVU0 708 aa23.12■■□□□ 1.29
CLIP2-205ENST00000482424 PCDH10Q9P2E7 1040 aa23.12■■□□□ 1.29
CLIP2-205ENST00000482424 DDX41Q9UJV9 622 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms