RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 TAAR1Q96RJ0 339 aa13.77□□□□□ -0.21
HMGN1-213ENST00000482192 IWS1Q96ST2 819 aa13.77□□□□□ -0.21
HMGN1-213ENST00000482192 LRRC2Q9BYS8 371 aa13.77□□□□□ -0.21
HMGN1-213ENST00000482192 PRDM5Q9NQX1 630 aaPredicted RBP13.77□□□□□ -0.21
HMGN1-213ENST00000482192 SEC63Q9UGP8 760 aaKnown RBP13.77□□□□□ -0.21
HMGN1-213ENST00000482192 SMCHD1A6NHR9 2005 aa13.76□□□□□ -0.21
HMGN1-213ENST00000482192 MROH7Q68CQ1 1323 aa13.76□□□□□ -0.21
HMGN1-213ENST00000482192 NKRFO15226 690 aaKnown RBP eCLIP13.76□□□□□ -0.21
HMGN1-213ENST00000482192 PQBP1O60828 265 aaKnown RBP13.76□□□□□ -0.21
HMGN1-213ENST00000482192 CABYRO75952 493 aa13.76□□□□□ -0.21
HMGN1-213ENST00000482192 CLTBP09497 229 aa13.76□□□□□ -0.21
HMGN1-213ENST00000482192 HSPA4P34932 840 aa13.76□□□□□ -0.21
HMGN1-213ENST00000482192 FXR1P51114 621 aaKnown RBP eCLIP13.76□□□□□ -0.21
HMGN1-213ENST00000482192 MDM2Q00987 491 aaPredicted RBP13.76□□□□□ -0.21
HMGN1-213ENST00000482192 PPP2R5BQ15173 497 aa13.76□□□□□ -0.21
HMGN1-213ENST00000482192 STXBP2Q15833 593 aa13.76□□□□□ -0.21
HMGN1-213ENST00000482192 ADCK5Q3MIX3 580 aa13.76□□□□□ -0.21
HMGN1-213ENST00000482192 TMEM63BQ5T3F8 832 aa13.76□□□□□ -0.21
HMGN1-213ENST00000482192 PPP4R3CPQ6ZMV5 832 aa13.76□□□□□ -0.21
HMGN1-213ENST00000482192 SYNE3Q6ZMZ3 975 aa13.76□□□□□ -0.21
HMGN1-213ENST00000482192 VTI1AQ96AJ9 217 aa13.76□□□□□ -0.21
HMGN1-213ENST00000482192 TOX2Q96NM4 488 aa13.76□□□□□ -0.21
HMGN1-213ENST00000482192 UBE2OQ9C0C9 1292 aaKnown RBP13.76□□□□□ -0.21
HMGN1-213ENST00000482192 PDLIM7Q9NR12 457 aa13.76□□□□□ -0.21
HMGN1-213ENST00000482192 A0A0U1RQG5 324 aaPredicted RBP13.75□□□□□ -0.21
HMGN1-213ENST00000482192 DCDC2CA8MYV0 355 aa13.75□□□□□ -0.21
HMGN1-213ENST00000482192 GCOM1H8Y6P7 765 aaPredicted RBP13.75□□□□□ -0.21
HMGN1-213ENST00000482192 PLEKHA8P1O95397 391 aa13.75□□□□□ -0.21
HMGN1-213ENST00000482192 POLR2MP0CAP2 368 aa13.75□□□□□ -0.21
HMGN1-213ENST00000482192 TXNP10599 105 aaKnown RBP13.75□□□□□ -0.21
HMGN1-213ENST00000482192 EIF2AK2P19525 551 aaKnown RBP13.75□□□□□ -0.21
HMGN1-213ENST00000482192 RXRAP19793 462 aa13.75□□□□□ -0.21
HMGN1-213ENST00000482192 PTGS1P23219 599 aa13.75□□□□□ -0.21
HMGN1-213ENST00000482192 HOXA13P31271 388 aaPredicted RBP13.75□□□□□ -0.21
HMGN1-213ENST00000482192 CPT1AP50416 773 aa13.75□□□□□ -0.21
HMGN1-213ENST00000482192 EXOSC10Q01780 885 aaKnown RBP13.75□□□□□ -0.21
HMGN1-213ENST00000482192 TTLL4Q14679 1199 aa13.75□□□□□ -0.21
HMGN1-213ENST00000482192 CXCL17Q6UXB2 119 aa13.75□□□□□ -0.21
HMGN1-213ENST00000482192 MICU3Q86XE3 530 aa13.75□□□□□ -0.21
HMGN1-213ENST00000482192 FANCBQ8NB91 859 aa13.75□□□□□ -0.21
HMGN1-213ENST00000482192 PIBF1Q8WXW3 757 aa13.75□□□□□ -0.21
HMGN1-213ENST00000482192 KCNB2Q92953 911 aa13.75□□□□□ -0.21
HMGN1-213ENST00000482192 PXMP2Q9NR77 195 aa13.75□□□□□ -0.21
HMGN1-213ENST00000482192 EPB41L2O43491 1005 aaKnown RBP13.74□□□□□ -0.21
HMGN1-213ENST00000482192 EIF3JO75822 258 aaKnown RBP13.74□□□□□ -0.21
HMGN1-213ENST00000482192 BRDTQ58F21 947 aaPredicted RBP13.74□□□□□ -0.21
HMGN1-213ENST00000482192 APOA5Q6Q788 366 aa13.74□□□□□ -0.21
HMGN1-213ENST00000482192 TMTC3Q6ZXV5 915 aa13.74□□□□□ -0.21
HMGN1-213ENST00000482192 RAB11FIP4Q86YS3 637 aa13.74□□□□□ -0.21
HMGN1-213ENST00000482192 TDHQ8IZJ6 230 aa13.74□□□□□ -0.21
HMGN1-213ENST00000482192 SRBD1Q8N5C6 995 aaKnown RBP13.74□□□□□ -0.21
HMGN1-213ENST00000482192 OR6J1Q8NGC5 347 aa13.74□□□□□ -0.21
HMGN1-213ENST00000482192 TCEANC2Q96MN5 208 aa13.74□□□□□ -0.21
HMGN1-213ENST00000482192 SEZ6LQ9BYH1 1024 aa13.74□□□□□ -0.21
HMGN1-213ENST00000482192 TRIM43BA6NCK2 446 aa13.73□□□□□ -0.21
HMGN1-213ENST00000482192 ARVCFO00192 962 aa13.73□□□□□ -0.21
HMGN1-213ENST00000482192 KIAA0355O15063 1070 aa13.73□□□□□ -0.21
HMGN1-213ENST00000482192 ZBTB43O43298 467 aa13.73□□□□□ -0.21
HMGN1-213ENST00000482192 NR3C2P08235 984 aa13.73□□□□□ -0.21
HMGN1-213ENST00000482192 CDK7P50613 346 aa13.73□□□□□ -0.21
HMGN1-213ENST00000482192 FGD1P98174 961 aa13.73□□□□□ -0.21
HMGN1-213ENST00000482192 CACNB1Q02641 598 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-213ENST00000482192 SEPT14Q6ZU15 432 aa13.73□□□□□ -0.21
HMGN1-213ENST00000482192 SH3RF1Q7Z6J0 888 aa13.73□□□□□ -0.21
HMGN1-213ENST00000482192 CMTR1Q8N1G2 835 aaKnown RBP13.73□□□□□ -0.21
HMGN1-213ENST00000482192 TRIM43Q96BQ3 446 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-213ENST00000482192 JAKMIP1Q96N16 626 aaKnown RBP13.73□□□□□ -0.21
HMGN1-213ENST00000482192 PDCD2LQ9BRP1 358 aa13.73□□□□□ -0.21
HMGN1-213ENST00000482192 TMEM39AQ9NV64 488 aa13.73□□□□□ -0.21
HMGN1-213ENST00000482192 POLR3EQ9NVU0 708 aa13.73□□□□□ -0.21
HMGN1-213ENST00000482192 RBM28Q9NW13 759 aaKnown RBP13.73□□□□□ -0.21
HMGN1-213ENST00000482192 PCDH10Q9P2E7 1040 aa13.73□□□□□ -0.21
HMGN1-213ENST00000482192 SNX14Q9Y5W7 946 aa13.73□□□□□ -0.21
HMGN1-213ENST00000482192 MYH6P13533 1939 aa13.72□□□□□ -0.21
HMGN1-213ENST00000482192 LTBP2Q14767 1821 aa13.72□□□□□ -0.21
HMGN1-213ENST00000482192 A6NJR5 290 aa13.72□□□□□ -0.21
HMGN1-213ENST00000482192 TLR3O15455 904 aaKnown RBP13.72□□□□□ -0.21
HMGN1-213ENST00000482192 KPNA6O60684 536 aa13.72□□□□□ -0.21
HMGN1-213ENST00000482192 RAG1P15918 1043 aa13.72□□□□□ -0.21
HMGN1-213ENST00000482192 RCAN1P53805 252 aa13.72□□□□□ -0.21
HMGN1-213ENST00000482192 FAAP100Q0VG06 881 aa13.72□□□□□ -0.21
HMGN1-213ENST00000482192 ITGA7Q13683 1181 aa13.72□□□□□ -0.21
HMGN1-213ENST00000482192 PGM5Q15124 567 aa13.72□□□□□ -0.21
HMGN1-213ENST00000482192 CCDC62Q6P9F0 684 aa13.72□□□□□ -0.21
HMGN1-213ENST00000482192 BLOC1S2Q6QNY1 142 aa13.72□□□□□ -0.21
HMGN1-213ENST00000482192 FCHSD1Q86WN1 690 aa13.72□□□□□ -0.21
HMGN1-213ENST00000482192 FAM126BQ8IXS8 530 aa13.72□□□□□ -0.21
HMGN1-213ENST00000482192 BADQ92934 168 aa13.72□□□□□ -0.21
HMGN1-213ENST00000482192 BRPF3Q9ULD4 1205 aa13.72□□□□□ -0.21
HMGN1-213ENST00000482192 CEP290O15078 2479 aa13.71□□□□□ -0.21
HMGN1-213ENST00000482192 KLF18A0A0U1RQI7 1052 aa13.71□□□□□ -0.21
HMGN1-213ENST00000482192 PIK3CDO00329 1044 aa13.71□□□□□ -0.21
HMGN1-213ENST00000482192 ARIH2O95376 493 aa13.71□□□□□ -0.21
HMGN1-213ENST00000482192 GH1P01241 217 aa13.71□□□□□ -0.21
HMGN1-213ENST00000482192 MYCLP12524 364 aaPredicted RBP13.71□□□□□ -0.21
HMGN1-213ENST00000482192 PSMA5P28066 241 aa13.71□□□□□ -0.21
HMGN1-213ENST00000482192 CCND2P30279 289 aa13.71□□□□□ -0.21
HMGN1-213ENST00000482192 PURAQ00577 322 aaKnown RBP13.71□□□□□ -0.21
HMGN1-213ENST00000482192 RTN1Q16799 776 aa13.71□□□□□ -0.21
HMGN1-213ENST00000482192 VSIG10LQ86VR7 867 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms