RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 POTEBQ6S5H4 581 aa17.74■□□□□ 0.43
HDAC6-224ENST00000481929 KCTD1Q719H9 257 aa17.74■□□□□ 0.43
HDAC6-224ENST00000481929 LRRC8DQ7L1W4 858 aa17.74■□□□□ 0.43
HDAC6-224ENST00000481929 FBXO22Q8NEZ5 403 aa17.74■□□□□ 0.43
HDAC6-224ENST00000481929 EPB41L4AQ9HCS5 686 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-224ENST00000481929 PRR12Q9ULL5 1215 aa17.74■□□□□ 0.43
HDAC6-224ENST00000481929 FAM50BQ9Y247 325 aa17.74■□□□□ 0.43
HDAC6-224ENST00000481929 SIP14410 1827 aa17.74■□□□□ 0.43
HDAC6-224ENST00000481929 ZNF318Q5VUA4 2279 aa17.73■□□□□ 0.43
HDAC6-224ENST00000481929 ABHD14A-ACY1A0A1B0GW23 586 aa17.73■□□□□ 0.43
HDAC6-224ENST00000481929 EFCAB14O75071 495 aa17.73■□□□□ 0.43
HDAC6-224ENST00000481929 ICAM1P05362 532 aa17.73■□□□□ 0.43
HDAC6-224ENST00000481929 RCSD1Q6JBY9 416 aa17.73■□□□□ 0.43
HDAC6-224ENST00000481929 NEK9Q8TD19 979 aa17.73■□□□□ 0.43
HDAC6-224ENST00000481929 CTNNA3Q9UI47 895 aa17.73■□□□□ 0.43
HDAC6-224ENST00000481929 TRIP12Q14669 1992 aaPredicted RBP17.73■□□□□ 0.43
HDAC6-224ENST00000481929 PTPDC1A2A3K4 754 aa17.72■□□□□ 0.43
HDAC6-224ENST00000481929 H3BQ06 376 aaPredicted RBP17.72■□□□□ 0.43
HDAC6-224ENST00000481929 CXCL10P02778 98 aa17.72■□□□□ 0.43
HDAC6-224ENST00000481929 APPP05067 770 aa17.72■□□□□ 0.43
HDAC6-224ENST00000481929 GNAT2P19087 354 aa17.72■□□□□ 0.43
HDAC6-224ENST00000481929 PDE4BQ07343 736 aa17.72■□□□□ 0.43
HDAC6-224ENST00000481929 PDE4DQ08499 809 aa17.72■□□□□ 0.43
HDAC6-224ENST00000481929 GPNMBQ14956 572 aa17.72■□□□□ 0.43
HDAC6-224ENST00000481929 PTPROQ16827 1216 aa17.72■□□□□ 0.43
HDAC6-224ENST00000481929 PPP4R3BQ5MIZ7 849 aa17.72■□□□□ 0.43
HDAC6-224ENST00000481929 FAM117BQ6P1L5 589 aa17.72■□□□□ 0.43
HDAC6-224ENST00000481929 SCFD2Q8WU76 684 aa17.72■□□□□ 0.43
HDAC6-224ENST00000481929 MPHOSPH6Q99547 160 aaKnown RBP17.72■□□□□ 0.43
HDAC6-224ENST00000481929 TFAP4Q01664 338 aa17.71■□□□□ 0.43
HDAC6-224ENST00000481929 TIGD5Q53EQ6 642 aa17.71■□□□□ 0.43
HDAC6-224ENST00000481929 HFE2Q6ZVN8 426 aa17.71■□□□□ 0.43
HDAC6-224ENST00000481929 APPBP2Q92624 585 aa17.71■□□□□ 0.43
HDAC6-224ENST00000481929 COPS5Q92905 334 aa17.71■□□□□ 0.43
HDAC6-224ENST00000481929 OSBP2Q969R2 916 aa17.71■□□□□ 0.43
HDAC6-224ENST00000481929 MRPL38Q96DV4 380 aaKnown RBP17.71■□□□□ 0.43
HDAC6-224ENST00000481929 MFSD14AQ96MC6 490 aa17.71■□□□□ 0.43
HDAC6-224ENST00000481929 PRKAG3Q9UGI9 489 aa17.71■□□□□ 0.43
HDAC6-224ENST00000481929 NFIBO00712 420 aa17.7■□□□□ 0.42
HDAC6-224ENST00000481929 GPAA1O43292 621 aa17.7■□□□□ 0.42
HDAC6-224ENST00000481929 NBNO60934 754 aa17.7■□□□□ 0.42
HDAC6-224ENST00000481929 SLC3A2P08195 630 aaKnown RBP17.7■□□□□ 0.42
HDAC6-224ENST00000481929 ZP2Q05996 745 aa17.7■□□□□ 0.42
HDAC6-224ENST00000481929 RBL2Q08999 1139 aa17.7■□□□□ 0.42
HDAC6-224ENST00000481929 IKBKEQ14164 716 aa17.7■□□□□ 0.42
HDAC6-224ENST00000481929 GDF6Q6KF10 455 aaPredicted RBP17.7■□□□□ 0.42
HDAC6-224ENST00000481929 SESTD1Q86VW0 696 aa17.7■□□□□ 0.42
HDAC6-224ENST00000481929 C17orf80Q9BSJ5 609 aa17.7■□□□□ 0.42
HDAC6-224ENST00000481929 UPF3BQ9BZI7 483 aaKnown RBP17.7■□□□□ 0.42
HDAC6-224ENST00000481929 STX8Q9UNK0 236 aa17.7■□□□□ 0.42
HDAC6-224ENST00000481929 INSL6Q9Y581 213 aa17.7■□□□□ 0.42
HDAC6-224ENST00000481929 WDFY4Q6ZS81 3184 aa17.7■□□□□ 0.42
HDAC6-224ENST00000481929 TXNP10599 105 aaKnown RBP17.69■□□□□ 0.42
HDAC6-224ENST00000481929 CALML3P27482 149 aa17.69■□□□□ 0.42
HDAC6-224ENST00000481929 CCDC96Q2M329 555 aa17.69■□□□□ 0.42
HDAC6-224ENST00000481929 TCTN1Q2MV58 587 aa17.69■□□□□ 0.42
HDAC6-224ENST00000481929 SLC30A10Q6XR72 485 aa17.69■□□□□ 0.42
HDAC6-224ENST00000481929 EP400NLQ6ZTU2 488 aa17.69■□□□□ 0.42
HDAC6-224ENST00000481929 DHX38Q92620 1227 aaKnown RBP17.69■□□□□ 0.42
HDAC6-224ENST00000481929 CTAGE1Q96RT6 745 aa17.69■□□□□ 0.42
HDAC6-224ENST00000481929 RANBP17Q9H2T7 1088 aaKnown RBP17.69■□□□□ 0.42
HDAC6-224ENST00000481929 MTMR7Q9Y216 660 aa17.69■□□□□ 0.42
HDAC6-224ENST00000481929 CKBP12277 381 aa17.68■□□□□ 0.42
HDAC6-224ENST00000481929 RASGRP2Q7LDG7 609 aa17.68■□□□□ 0.42
HDAC6-224ENST00000481929 ADHFE1Q8IWW8 467 aa17.68■□□□□ 0.42
HDAC6-224ENST00000481929 IFNL3Q8IZI9 196 aa17.68■□□□□ 0.42
HDAC6-224ENST00000481929 KBTBD3Q8NAB2 608 aa17.68■□□□□ 0.42
HDAC6-224ENST00000481929 PANK1Q8TE04 598 aa17.68■□□□□ 0.42
HDAC6-224ENST00000481929 PABPC5Q96DU9 382 aaKnown RBP17.68■□□□□ 0.42
HDAC6-224ENST00000481929 NACAP1Q9BZK3 213 aa17.68■□□□□ 0.42
HDAC6-224ENST00000481929 C19orf67A6NJJ6 358 aa17.67■□□□□ 0.42
HDAC6-224ENST00000481929 B4DLN1 442 aa17.67■□□□□ 0.42
HDAC6-224ENST00000481929 RNF113AO15541 343 aaKnown RBP17.67■□□□□ 0.42
HDAC6-224ENST00000481929 EDNRBP24530 442 aa17.67■□□□□ 0.42
HDAC6-224ENST00000481929 MRPL12P52815 198 aaKnown RBP17.67■□□□□ 0.42
HDAC6-224ENST00000481929 RNF207Q6ZRF8 634 aa17.67■□□□□ 0.42
HDAC6-224ENST00000481929 SIRT2Q8IXJ6 389 aa17.67■□□□□ 0.42
HDAC6-224ENST00000481929 BANK1Q8NDB2 785 aa17.67■□□□□ 0.42
HDAC6-224ENST00000481929 SAMD11Q96NU1 681 aa17.67■□□□□ 0.42
HDAC6-224ENST00000481929 TSPY2A6NKD2 308 aa17.66■□□□□ 0.42
HDAC6-224ENST00000481929 PATL2C9JE40 543 aaKnown RBP17.66■□□□□ 0.42
HDAC6-224ENST00000481929 ZFYP08048 801 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-224ENST00000481929 MMP3P08254 477 aa17.66■□□□□ 0.42
HDAC6-224ENST00000481929 EPC2Q52LR7 807 aa17.66■□□□□ 0.42
HDAC6-224ENST00000481929 TCEAL5Q5H9L2 206 aa17.66■□□□□ 0.42
HDAC6-224ENST00000481929 DNERQ8NFT8 737 aa17.66■□□□□ 0.42
HDAC6-224ENST00000481929 DCAF4Q8WV16 495 aa17.66■□□□□ 0.42
HDAC6-224ENST00000481929 AFG1LQ8WV93 481 aa17.66■□□□□ 0.42
HDAC6-224ENST00000481929 ANKS1AQ92625 1134 aa17.66■□□□□ 0.42
HDAC6-224ENST00000481929 PHOX2BQ99453 314 aa17.66■□□□□ 0.42
HDAC6-224ENST00000481929 M0R2C6 588 aa17.65■□□□□ 0.42
HDAC6-224ENST00000481929 ST18O60284 1047 aa17.65■□□□□ 0.42
HDAC6-224ENST00000481929 ARIH2O95376 493 aa17.65■□□□□ 0.42
HDAC6-224ENST00000481929 AMHP03971 560 aa17.65■□□□□ 0.42
HDAC6-224ENST00000481929 IRS1P35568 1242 aa17.65■□□□□ 0.42
HDAC6-224ENST00000481929 SLC16A2P36021 539 aa17.65■□□□□ 0.42
HDAC6-224ENST00000481929 PPARAQ07869 468 aa17.65■□□□□ 0.42
HDAC6-224ENST00000481929 SYDE2Q5VT97 1194 aa17.65■□□□□ 0.42
HDAC6-224ENST00000481929 MYOCDQ8IZQ8 938 aa17.65■□□□□ 0.42
HDAC6-224ENST00000481929 SP7Q8TDD2 431 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms