RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ZHX3Q9H4I2 956 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 CNNM2Q9H8M5 875 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 SLC52A2Q9HAB3 445 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 ATP13A2Q9NQ11 1180 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 JADE2Q9NQC1 790 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 ZFATQ9P243 1243 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 ZNF69Q9UC07 566 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 PCDHGA9Q9Y5G4 932 aaKnown RBP4.11□□□□□ -1.75
SMC6-208ENST00000481708 PCDHGA8Q9Y5G5 932 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 PCDHGA7Q9Y5G6 932 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 PCDHGA6Q9Y5G7 932 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 PCDHGA3Q9Y5H0 932 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 PCDHGA2Q9Y5H1 932 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 LTBP2Q14767 1821 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 RASSF10A6NK89 507 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 PHF20L1A8MW92 1017 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 RPLP1P05386 114 aaKnown RBP4.11□□□□□ -1.75
SMC6-208ENST00000481708 IFIT2P09913 472 aaKnown RBP4.11□□□□□ -1.75
SMC6-208ENST00000481708 POU3F2P20265 443 aaPredicted RBP4.11□□□□□ -1.75
SMC6-208ENST00000481708 TNFAIP3P21580 790 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 MAN1A1P33908 653 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 ZNF157P51786 506 aaPredicted RBP4.11□□□□□ -1.75
SMC6-208ENST00000481708 GJA10Q969M2 543 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 NAP1L4Q99733 375 aaKnown RBP4.11□□□□□ -1.75
SMC6-208ENST00000481708 EFCC1Q9HA90 598 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 DISC1Q9NRI5 854 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 ADGRF5Q8IZF2 1346 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 SUSD5O60279 629 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 LIG1P18858 919 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 TARSP26639 723 aaKnown RBP4.11□□□□□ -1.75
SMC6-208ENST00000481708 TERF1P54274 439 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 HTRA3P83110 453 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 PTSQ03393 145 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 ZRSR2Q15696 482 aaKnown RBP4.11□□□□□ -1.75
SMC6-208ENST00000481708 NBPF8Q3BBV2 869 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 PKDCCQ504Y2 493 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 HGSNATQ68CP4 663 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 ZNF513Q8N8E2 541 aaPredicted RBP4.11□□□□□ -1.75
SMC6-208ENST00000481708 OSBPL5Q9H0X9 879 aaPredicted RBP4.11□□□□□ -1.75
SMC6-208ENST00000481708 ABI2Q9NYB9 513 aaPredicted RBP4.11□□□□□ -1.75
SMC6-208ENST00000481708 SUSD2Q9UGT4 822 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 PPM1HQ9ULR3 514 aa4.11□□□□□ -1.75
SMC6-208ENST00000481708 PARP14Q460N5 1801 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 DCDC2BA2VCK2 349 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 GFRA3O60609 400 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 SASH3O75995 380 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 MAP3K6O95382 1288 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 NRLP54845 237 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 KCNQ4P56696 695 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 MPP2Q14168 576 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.1□□□□□ -1.755e-7■□□□□ 9
SMC6-208ENST00000481708 ZBTB46Q86UZ6 589 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 CCNJLQ8IV13 435 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 REXO1Q8N1G1 1221 aaKnown RBP4.1□□□□□ -1.75
SMC6-208ENST00000481708 TTC16Q8NEE8 873 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 ZNF669Q96BR6 464 aaPredicted RBP4.1□□□□□ -1.75
SMC6-208ENST00000481708 PUF60Q9UHX1 559 aaKnown RBP4.1□□□□□ -1.75
SMC6-208ENST00000481708 DNM3Q9UQ16 869 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 FNDC3AQ9Y2H6 1198 aaKnown RBP4.1□□□□□ -1.75
SMC6-208ENST00000481708 GPR52Q9Y2T5 361 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 CORINQ9Y5Q5 1042 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 ALPK3Q96L96 1907 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 PLD2O14939 933 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 NPHP1O15259 732 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 PTPN21Q16825 1174 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 SLC6A19Q695T7 634 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 SLC7A3Q8WY07 619 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 RUSC1Q9BVN2 902 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 ANAPC4Q9UJX5 808 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 ANKRD36BQ8N2N9 1353 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.1□□□□□ -1.75
SMC6-208ENST00000481708 KPNA6O60684 536 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 DGAT1O75907 488 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 BPIP17213 487 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 DBN1Q16643 649 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 KRT25Q7Z3Z0 450 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 PDLIM7Q9NR12 457 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 NDFIP2Q9NV92 336 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 PLXNB2O15031 1838 aa4.1□□□□□ -1.75
SMC6-208ENST00000481708 ABHD14A-ACY1A0A1B0GW23 586 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 SLC35F4A4IF30 521 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 ZNF891A8MT65 544 aaPredicted RBP4.09□□□□□ -1.75
SMC6-208ENST00000481708 MAN1A2O60476 641 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 PF4V1P10720 104 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 MCCP23508 829 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 GUCY2CP25092 1073 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 POU5F1Q01860 360 aaKnown RBP4.09□□□□□ -1.75
SMC6-208ENST00000481708 ALDH1L2Q3SY69 923 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 NLRP13Q86W25 1043 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 PASD1Q8IV76 773 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 ELAC2Q9BQ52 826 aaKnown RBP4.09□□□□□ -1.75
SMC6-208ENST00000481708 KLHL11Q9NVR0 708 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 PTPN22Q9Y2R2 807 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 MGAMO43451 1857 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 BLACEA4D250 179 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 NRG2O14511 850 aaPredicted RBP4.09□□□□□ -1.75
SMC6-208ENST00000481708 BNIP3LO60238 219 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 FAM157BP0CG42 384 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 ZNF252P-AS1Q0IIN9 211 aa4.09□□□□□ -1.75
SMC6-208ENST00000481708 HLTFQ14527 1009 aaKnown RBP eCLIP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms