RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 PTGS1P23219 599 aa21.67■■□□□ 1.06
HSPG2-210ENST00000481644 NKX3-2P78367 333 aa21.67■■□□□ 1.06
HSPG2-210ENST00000481644 FGD1P98174 961 aa21.67■■□□□ 1.06
HSPG2-210ENST00000481644 BEX3Q00994 111 aa21.67■■□□□ 1.06
HSPG2-210ENST00000481644 DUSP28Q4G0W2 176 aa21.67■■□□□ 1.06
HSPG2-210ENST00000481644 TMEM63BQ5T3F8 832 aa21.67■■□□□ 1.06
HSPG2-210ENST00000481644 ARHGEF16Q5VV41 709 aa21.67■■□□□ 1.06
HSPG2-210ENST00000481644 CMTR1Q8N1G2 835 aaKnown RBP21.67■■□□□ 1.06
HSPG2-210ENST00000481644 IWS1Q96ST2 819 aa21.67■■□□□ 1.06
HSPG2-210ENST00000481644 EPB41L2O43491 1005 aaKnown RBP21.66■■□□□ 1.06
HSPG2-210ENST00000481644 CPA1P15085 419 aa21.66■■□□□ 1.06
HSPG2-210ENST00000481644 EIF2AK2P19525 551 aaKnown RBP21.66■■□□□ 1.06
HSPG2-210ENST00000481644 HOXA13P31271 388 aaPredicted RBP21.66■■□□□ 1.06
HSPG2-210ENST00000481644 FSCN1Q16658 493 aaKnown RBP21.66■■□□□ 1.06
HSPG2-210ENST00000481644 BLOC1S2Q6QNY1 142 aa21.66■■□□□ 1.06
HSPG2-210ENST00000481644 TMTC3Q6ZXV5 915 aa21.66■■□□□ 1.06
HSPG2-210ENST00000481644 SCFD2Q8WU76 684 aa21.66■■□□□ 1.06
HSPG2-210ENST00000481644 GLT1D1Q96MS3 346 aa21.66■■□□□ 1.06
HSPG2-210ENST00000481644 PXMP2Q9NR77 195 aa21.66■■□□□ 1.06
HSPG2-210ENST00000481644 RBM27Q9P2N5 1060 aaKnown RBP21.66■■□□□ 1.06
HSPG2-210ENST00000481644 KIAA1217Q5T5P2 1943 aa21.66■■□□□ 1.06
HSPG2-210ENST00000481644 GCOM1H8Y6P7 765 aaPredicted RBP21.65■■□□□ 1.06
HSPG2-210ENST00000481644 ZBTB43O43298 467 aa21.65■■□□□ 1.06
HSPG2-210ENST00000481644 POLR2MP0CAP2 368 aa21.65■■□□□ 1.06
HSPG2-210ENST00000481644 PPP2R5BQ15173 497 aa21.65■■□□□ 1.06
HSPG2-210ENST00000481644 STXBP2Q15833 593 aa21.65■■□□□ 1.06
HSPG2-210ENST00000481644 VTI1AQ96AJ9 217 aa21.65■■□□□ 1.06
HSPG2-210ENST00000481644 PRKAG2Q9UGJ0 569 aa21.65■■□□□ 1.06
HSPG2-210ENST00000481644 BRPF3Q9ULD4 1205 aa21.65■■□□□ 1.06
HSPG2-210ENST00000481644 ELP1O95163 1332 aa21.64■■□□□ 1.05
HSPG2-210ENST00000481644 KLF18A0A0U1RQI7 1052 aa21.64■■□□□ 1.05
HSPG2-210ENST00000481644 ZEB2O60315 1214 aa21.64■■□□□ 1.05
HSPG2-210ENST00000481644 MAGEA10P43363 369 aaPredicted RBP21.64■■□□□ 1.05
HSPG2-210ENST00000481644 CCDC82Q8N4S0 544 aa21.64■■□□□ 1.05
HSPG2-210ENST00000481644 PRO3102Q9H379 93 aa21.64■■□□□ 1.05
HSPG2-210ENST00000481644 RBM28Q9NW13 759 aaKnown RBP21.64■■□□□ 1.05
HSPG2-210ENST00000481644 DNAH12Q6ZR08 3092 aa21.64■■□□□ 1.05
HSPG2-210ENST00000481644 NKRFO15226 690 aaKnown RBP eCLIP21.63■■□□□ 1.05
HSPG2-210ENST00000481644 NR3C2P08235 984 aa21.63■■□□□ 1.05
HSPG2-210ENST00000481644 PSMA5P28066 241 aa21.63■■□□□ 1.05
HSPG2-210ENST00000481644 TLE2Q04725 743 aa21.63■■□□□ 1.05
HSPG2-210ENST00000481644 TTLL4Q14679 1199 aa21.63■■□□□ 1.05
HSPG2-210ENST00000481644 RTN1Q16799 776 aa21.63■■□□□ 1.05
HSPG2-210ENST00000481644 Q6ZUG5 572 aa21.63■■□□□ 1.05
HSPG2-210ENST00000481644 FCHSD1Q86WN1 690 aa21.63■■□□□ 1.05
HSPG2-210ENST00000481644 OR6J1Q8NGC5 347 aa21.63■■□□□ 1.05
HSPG2-210ENST00000481644 GDF15Q99988 308 aa21.63■■□□□ 1.05
HSPG2-210ENST00000481644 PRDM5Q9NQX1 630 aaPredicted RBP21.63■■□□□ 1.05
HSPG2-210ENST00000481644 PCDH10Q9P2E7 1040 aa21.63■■□□□ 1.05
HSPG2-210ENST00000481644 NAP1L2Q9ULW6 460 aaPredicted RBP21.63■■□□□ 1.05
HSPG2-210ENST00000481644 LTBP2Q14767 1821 aa21.62■■□□□ 1.05
HSPG2-210ENST00000481644 GOLGA8AA7E2F4 631 aa21.62■■□□□ 1.05
HSPG2-210ENST00000481644 GOLGA8BA8MQT2 603 aa21.62■■□□□ 1.05
HSPG2-210ENST00000481644 PQBP1O60828 265 aaKnown RBP21.62■■□□□ 1.05
HSPG2-210ENST00000481644 TXNP10599 105 aaKnown RBP21.62■■□□□ 1.05
HSPG2-210ENST00000481644 CASTP20810 708 aaKnown RBP21.62■■□□□ 1.05
HSPG2-210ENST00000481644 RPS6KB1P23443 525 aa21.62■■□□□ 1.05
HSPG2-210ENST00000481644 CXCL17Q6UXB2 119 aa21.62■■□□□ 1.05
HSPG2-210ENST00000481644 SEPT14Q6ZU15 432 aa21.62■■□□□ 1.05
HSPG2-210ENST00000481644 PDCD2LQ9BRP1 358 aa21.62■■□□□ 1.05
HSPG2-210ENST00000481644 USP26Q9BXU7 913 aa21.62■■□□□ 1.05
HSPG2-210ENST00000481644 A0A0U1RQG5 324 aaPredicted RBP21.61■■□□□ 1.05
HSPG2-210ENST00000481644 hCG_1642624A0A1W2PR95 340 aa21.61■■□□□ 1.05
HSPG2-210ENST00000481644 EIF3JO75822 258 aaKnown RBP21.61■■□□□ 1.05
HSPG2-210ENST00000481644 ARIH2O95376 493 aa21.61■■□□□ 1.05
HSPG2-210ENST00000481644 MYCLP12524 364 aaPredicted RBP21.61■■□□□ 1.05
HSPG2-210ENST00000481644 MDM2Q00987 491 aaPredicted RBP21.61■■□□□ 1.05
HSPG2-210ENST00000481644 APOBRQ0VD83 1088 aa21.61■■□□□ 1.05
HSPG2-210ENST00000481644 COPS5Q92905 334 aa21.61■■□□□ 1.05
HSPG2-210ENST00000481644 BRF1Q92994 677 aa21.61■■□□□ 1.05
HSPG2-210ENST00000481644 LBHD1Q9BQE6 289 aaPredicted RBP21.61■■□□□ 1.05
HSPG2-210ENST00000481644 PDLIM7Q9NR12 457 aa21.61■■□□□ 1.05
HSPG2-210ENST00000481644 MROH7Q68CQ1 1323 aa21.6■■□□□ 1.05
HSPG2-210ENST00000481644 CNTNAP5Q8WYK1 1306 aa21.6■■□□□ 1.05
HSPG2-210ENST00000481644 CABYRO75952 493 aa21.6■■□□□ 1.05
HSPG2-210ENST00000481644 CLTBP09497 229 aa21.6■■□□□ 1.05
HSPG2-210ENST00000481644 BMP8BP34820 402 aa21.6■■□□□ 1.05
HSPG2-210ENST00000481644 CPT1AP50416 773 aa21.6■■□□□ 1.05
HSPG2-210ENST00000481644 RCAN1P53805 252 aa21.6■■□□□ 1.05
HSPG2-210ENST00000481644 PGM5Q15124 567 aa21.6■■□□□ 1.05
HSPG2-210ENST00000481644 ANKRD33Q7Z3H0 272 aa21.6■■□□□ 1.05
HSPG2-210ENST00000481644 SMARCC2Q8TAQ2 1214 aa21.6■■□□□ 1.05
HSPG2-210ENST00000481644 CUL5Q93034 780 aa21.6■■□□□ 1.05
HSPG2-210ENST00000481644 DCDC2CA8MYV0 355 aa21.59■■□□□ 1.05
HSPG2-210ENST00000481644 ARVCFO00192 962 aa21.59■■□□□ 1.05
HSPG2-210ENST00000481644 METAP2P50579 478 aaKnown RBP eCLIP21.59■■□□□ 1.051e-6■□□□□ 10.3
HSPG2-210ENST00000481644 BRDTQ58F21 947 aaPredicted RBP21.59■■□□□ 1.05
HSPG2-210ENST00000481644 CCDC62Q6P9F0 684 aa21.59■■□□□ 1.05
HSPG2-210ENST00000481644 HEATR3Q7Z4Q2 680 aa21.59■■□□□ 1.05
HSPG2-210ENST00000481644 SH3RF1Q7Z6J0 888 aa21.59■■□□□ 1.05
HSPG2-210ENST00000481644 TOX2Q96NM4 488 aa21.59■■□□□ 1.05
HSPG2-210ENST00000481644 UBE2OQ9C0C9 1292 aaKnown RBP21.59■■□□□ 1.05
HSPG2-210ENST00000481644 POLR3EQ9NVU0 708 aa21.59■■□□□ 1.05
HSPG2-210ENST00000481644 A0A1W2PPC1 479 aa21.58■■□□□ 1.05
HSPG2-210ENST00000481644 CCND2P30279 289 aa21.58■■□□□ 1.05
HSPG2-210ENST00000481644 LY6KQ17RY6 165 aa21.58■■□□□ 1.05
HSPG2-210ENST00000481644 FBXL16Q8N461 479 aa21.58■■□□□ 1.05
HSPG2-210ENST00000481644 IL31RAQ8NI17 732 aa21.58■■□□□ 1.05
HSPG2-210ENST00000481644 MRVI1Q9Y6F6 885 aa21.58■■□□□ 1.05
HSPG2-210ENST00000481644 TRIOBPQ9H2D6 2365 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms