RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 ASGR1P07306 291 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 PSMC6P62333 389 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 MDM2Q00987 491 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 TLE2Q04725 743 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 PDE4DQ08499 809 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 GNASQ5JWF2 1037 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 TYW1BQ6NUM6 668 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 CXCL17Q6UXB2 119 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 FCHSD1Q86WN1 690 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 CTCFLQ8NI51 663 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 TRIM43Q96BQ3 446 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 RMDN3Q96TC7 470 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 MTA3Q9BTC8 594 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 SPZ1Q9BXG8 430 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 WDR11Q9BZH6 1224 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 PXMP2Q9NR77 195 aa13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 ADD3Q9UEY8 706 aaKnown RBP13.22□□□□□ -0.29
RAPGEF1-207ENST00000481260 MYH6P13533 1939 aa13.21□□□□□ -0.29
RAPGEF1-207ENST00000481260 CNTNAP5Q8WYK1 1306 aa13.21□□□□□ -0.29
RAPGEF1-207ENST00000481260 PQBP1O60828 265 aaKnown RBP13.21□□□□□ -0.29
RAPGEF1-207ENST00000481260 RGS20O76081 388 aa13.21□□□□□ -0.29
RAPGEF1-207ENST00000481260 CST5P28325 142 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF1-207ENST00000481260 GHRHRQ02643 423 aa13.21□□□□□ -0.29
RAPGEF1-207ENST00000481260 FSCN1Q16658 493 aaKnown RBP13.21□□□□□ -0.29
RAPGEF1-207ENST00000481260 LY6KQ17RY6 165 aa13.21□□□□□ -0.29
RAPGEF1-207ENST00000481260 USP17L6PQ6QN14 398 aa13.21□□□□□ -0.29
RAPGEF1-207ENST00000481260 SEPT14Q6ZU15 432 aa13.21□□□□□ -0.29
RAPGEF1-207ENST00000481260 DNERQ8NFT8 737 aa13.21□□□□□ -0.29
RAPGEF1-207ENST00000481260 MAP3K14Q99558 947 aa13.21□□□□□ -0.29
RAPGEF1-207ENST00000481260 GDF15Q99988 308 aa13.21□□□□□ -0.29
RAPGEF1-207ENST00000481260 BCAS3Q9H6U6 928 aa13.21□□□□□ -0.29
RAPGEF1-207ENST00000481260 PDLIM7Q9NR12 457 aa13.21□□□□□ -0.29
RAPGEF1-207ENST00000481260 TELO2Q9Y4R8 837 aa13.21□□□□□ -0.29
RAPGEF1-207ENST00000481260 CASTP20810 708 aaKnown RBP13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 RPS6KB1P23443 525 aa13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 KIF5BP33176 963 aa13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 ADD1P35611 737 aaKnown RBP13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 NKX3-2P78367 333 aa13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 UBE2SQ16763 222 aa13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 DUSP28Q4G0W2 176 aa13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 ARHGEF16Q5VV41 709 aa13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 IQSEC1Q6DN90 963 aa13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 CCDC62Q6P9F0 684 aa13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 MCF2L2Q86YR7 1114 aa13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 NSUN6Q8TEA1 469 aaKnown RBP13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 BRF1Q92994 677 aa13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 RRP36Q96EU6 259 aaKnown RBP13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 PDCD2LQ9BRP1 358 aa13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 TSEN34Q9BSV6 310 aaKnown RBP13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 UPF3BQ9BZI7 483 aaKnown RBP13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 PRDM5Q9NQX1 630 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 PNMA2Q9UL42 364 aa13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 NAP1L2Q9ULW6 460 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF1-207ENST00000481260 GOLGA8AA7E2F4 631 aa13.19□□□□□ -0.3
RAPGEF1-207ENST00000481260 GOLGA8BA8MQT2 603 aa13.19□□□□□ -0.3
RAPGEF1-207ENST00000481260 SOX1O00570 391 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF1-207ENST00000481260 MEIS2O14770 477 aa13.19□□□□□ -0.3
RAPGEF1-207ENST00000481260 ZBTB43O43298 467 aa13.19□□□□□ -0.3
RAPGEF1-207ENST00000481260 REC8O95072 547 aa13.19□□□□□ -0.3
RAPGEF1-207ENST00000481260 NR3C2P08235 984 aa13.19□□□□□ -0.3
RAPGEF1-207ENST00000481260 MYCLP12524 364 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF1-207ENST00000481260 TOB2Q14106 344 aaPredicted RBP13.19□□□□□ -0.3
RAPGEF1-207ENST00000481260 KRT32Q14532 448 aa13.19□□□□□ -0.3
RAPGEF1-207ENST00000481260 RTN1Q16799 776 aa13.19□□□□□ -0.3
RAPGEF1-207ENST00000481260 WWC2Q6AWC2 1192 aa13.19□□□□□ -0.3
RAPGEF1-207ENST00000481260 BLOC1S2Q6QNY1 142 aa13.19□□□□□ -0.3
RAPGEF1-207ENST00000481260 TMTC2Q8N394 836 aa13.19□□□□□ -0.3
RAPGEF1-207ENST00000481260 OR6J1Q8NGC5 347 aa13.19□□□□□ -0.3
RAPGEF1-207ENST00000481260 NCOA5Q9HCD5 579 aaKnown RBP13.19□□□□□ -0.3
RAPGEF1-207ENST00000481260 STARD7Q9NQZ5 370 aa13.19□□□□□ -0.3
RAPGEF1-207ENST00000481260 GCOM1H8Y6P7 765 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF1-207ENST00000481260 POLR2MP0CAP2 368 aa13.18□□□□□ -0.3
RAPGEF1-207ENST00000481260 TXNP10599 105 aaKnown RBP13.18□□□□□ -0.3
RAPGEF1-207ENST00000481260 CDK7P50613 346 aa13.18□□□□□ -0.3
RAPGEF1-207ENST00000481260 FXR1P51114 621 aaKnown RBP eCLIP13.18□□□□□ -0.3
RAPGEF1-207ENST00000481260 MRPS9P82933 396 aaKnown RBP13.18□□□□□ -0.3
RAPGEF1-207ENST00000481260 SP2Q02086 613 aa13.18□□□□□ -0.3
RAPGEF1-207ENST00000481260 ARHGAP1Q07960 439 aa13.18□□□□□ -0.3
RAPGEF1-207ENST00000481260 FAAP100Q0VG06 881 aa13.18□□□□□ -0.3
RAPGEF1-207ENST00000481260 PGM5Q15124 567 aa13.18□□□□□ -0.3
RAPGEF1-207ENST00000481260 HEATR3Q7Z4Q2 680 aa13.18□□□□□ -0.3
RAPGEF1-207ENST00000481260 VTI1AQ96AJ9 217 aa13.18□□□□□ -0.3
RAPGEF1-207ENST00000481260 AP5M1Q9H0R1 490 aa13.18□□□□□ -0.3
RAPGEF1-207ENST00000481260 V9GY48 417 aaPredicted RBP13.18□□□□□ -0.3
RAPGEF1-207ENST00000481260 MOXD2PA6NHM9 499 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 MYL3P08590 195 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 CALM1P0DP23 149 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 CALM2P0DP24 149 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 CALM3P0DP25 149 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 SMARCA1P28370 1054 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 GNAQP50148 359 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 EPHB4P54760 987 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 SEMA3FQ13275 785 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 PPP2R5BQ15173 497 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 VSIG10LQ86VR7 867 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 SCFD2Q8WU76 684 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 AFG1LQ8WV93 481 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 BADQ92934 168 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 PGBD1Q96JS3 809 aa13.17□□□□□ -0.3
RAPGEF1-207ENST00000481260 LZTS2Q9BRK4 669 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms