RNA–Protein interactions for RNA: ENST00000480686.5

RNF220-213, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-213ENST00000480686 CASKIN2Q8WXE0 1202 aa13.94□□□□□ -0.18
RNF220-213ENST00000480686 PRMT1Q99873 361 aaKnown RBP13.94□□□□□ -0.18
RNF220-213ENST00000480686 TMBIM4Q9HC24 238 aa13.94□□□□□ -0.18
RNF220-213ENST00000480686 NKIRAS1Q9NYS0 192 aa13.94□□□□□ -0.18
RNF220-213ENST00000480686 BICDL2A1A5D9 508 aa13.94□□□□□ -0.18
RNF220-213ENST00000480686 PALMO75781 387 aa13.94□□□□□ -0.18
RNF220-213ENST00000480686 PLTPP55058 493 aa13.94□□□□□ -0.18
RNF220-213ENST00000480686 ITGB3BPQ13352 177 aaPredicted RBP13.94□□□□□ -0.18
RNF220-213ENST00000480686 CUL4BQ13620 913 aa13.94□□□□□ -0.18
RNF220-213ENST00000480686 CAVIN3Q969G5 261 aa13.94□□□□□ -0.18
RNF220-213ENST00000480686 DYDC2Q96IM9 177 aa13.94□□□□□ -0.18
RNF220-213ENST00000480686 NACAP1Q9BZK3 213 aa13.94□□□□□ -0.18
RNF220-213ENST00000480686 PLCB1Q9NQ66 1216 aa13.94□□□□□ -0.18
RNF220-213ENST00000480686 MTRF1LQ9UGC7 380 aaKnown RBP13.94□□□□□ -0.18
RNF220-213ENST00000480686 NPHP4O75161 1426 aaPredicted RBP13.93□□□□□ -0.18
RNF220-213ENST00000480686 DNAJC8O75937 253 aaPredicted RBP13.93□□□□□ -0.18
RNF220-213ENST00000480686 DEXIO95424 95 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 PLEKP08567 350 aaPredicted RBP13.93□□□□□ -0.18
RNF220-213ENST00000480686 SH2D4BQ5SQS7 431 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 OSBP2Q969R2 916 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 MCUR1Q96AQ8 359 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 RMI1Q9H9A7 625 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.93□□□□□ -0.18
RNF220-213ENST00000480686 MAP3K4Q9Y6R4 1608 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 COL3A1P02461 1466 aaPredicted RBP13.93□□□□□ -0.18
RNF220-213ENST00000480686 DPPA5A6NC42 116 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 UBE2Q2LH0YL09 131 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 DAPK3O43293 454 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 RAD51CO43502 376 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 MGRN1O60291 552 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 PPFIA2O75334 1257 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 TTC38Q5R3I4 469 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 CRELD2Q6UXH1 353 aaPredicted RBP13.93□□□□□ -0.18
RNF220-213ENST00000480686 ANKRD13DQ6ZTN6 518 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 FAM228AQ86W67 206 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 TEX9Q8N6V9 391 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 GBP7Q8N8V2 638 aaPredicted RBP13.93□□□□□ -0.18
RNF220-213ENST00000480686 CNOT6LQ96LI5 555 aaKnown RBP13.93□□□□□ -0.18
RNF220-213ENST00000480686 RNF14Q9UBS8 474 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 SERPINA10Q9UK55 444 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 CAPN11Q9UMQ6 739 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 M0R2C6 588 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 RFC5P40937 340 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 PRCPP42785 496 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 SCNN1BP51168 640 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 PTGDRQ13258 359 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 MAIP1Q8WWC4 291 aa13.93□□□□□ -0.18
RNF220-213ENST00000480686 LIMA1Q9UHB6 759 aaKnown RBP13.93□□□□□ -0.18
RNF220-213ENST00000480686 CFAP157Q5JU67 520 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 PEX26Q7Z412 305 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 TATDN2Q93075 761 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 FERMT2Q96AC1 680 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 REXO2Q9Y3B8 237 aaKnown RBP13.92□□□□□ -0.18
RNF220-213ENST00000480686 INO80Q9ULG1 1556 aaPredicted RBP13.92□□□□□ -0.18
RNF220-213ENST00000480686 GTPBP6O43824 516 aaPredicted RBP13.92□□□□□ -0.18
RNF220-213ENST00000480686 PRDM1O75626 825 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 SMNDC1O75940 238 aaKnown RBP eCLIP13.92□□□□□ -0.18
RNF220-213ENST00000480686 EEF1GP26641 437 aaKnown RBP13.92□□□□□ -0.18
RNF220-213ENST00000480686 KLK7P49862 253 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 GFPT1Q06210 699 aaPredicted RBP13.92□□□□□ -0.18
RNF220-213ENST00000480686 PIK3AP1Q6ZUJ8 805 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 IQCKQ8N0W5 287 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 EPAS1Q99814 870 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 GGA2Q9UJY4 613 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 FBXO2Q9UK22 296 aaPredicted RBP13.92□□□□□ -0.18
RNF220-213ENST00000480686 THRAP3Q9Y2W1 955 aaKnown RBP13.92□□□□□ -0.18
RNF220-213ENST00000480686 KNDC1Q76NI1 1749 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 RCCD1A6NED2 376 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 RANBP6O60518 1105 aaKnown RBP13.92□□□□□ -0.18
RNF220-213ENST00000480686 VPS36Q86VN1 386 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 VPS52Q8N1B4 723 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 SNRNP27Q8WVK2 155 aaKnown RBP13.92□□□□□ -0.18
RNF220-213ENST00000480686 DNAJC9Q8WXX5 260 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 FMO2Q99518 471 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 V9GY48 417 aaPredicted RBP13.92□□□□□ -0.18
RNF220-213ENST00000480686 ZNF609O15014 1411 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 ASXL2Q76L83 1435 aa13.92□□□□□ -0.18
RNF220-213ENST00000480686 CDK12Q9NYV4 1490 aaPredicted RBP13.91□□□□□ -0.18
RNF220-213ENST00000480686 ECEL1O95672 775 aa13.91□□□□□ -0.18
RNF220-213ENST00000480686 SLC39A6Q13433 755 aa13.91□□□□□ -0.18
RNF220-213ENST00000480686 SPRED3Q2MJR0 410 aa13.91□□□□□ -0.18
RNF220-213ENST00000480686 TOM1L2Q6ZVM7 507 aa13.91□□□□□ -0.18
RNF220-213ENST00000480686 GORASP1Q9BQQ3 440 aa13.91□□□□□ -0.18
RNF220-213ENST00000480686 EDC4Q6P2E9 1401 aaKnown RBP13.91□□□□□ -0.18
RNF220-213ENST00000480686 ABCA6Q8N139 1617 aa13.91□□□□□ -0.18
RNF220-213ENST00000480686 ATP7BP35670 1465 aa13.91□□□□□ -0.18
RNF220-213ENST00000480686 CCDC194A0A1B0GVG4 234 aa13.91□□□□□ -0.18
RNF220-213ENST00000480686 MMP1P03956 469 aa13.91□□□□□ -0.18
RNF220-213ENST00000480686 CUL1Q13616 776 aa13.91□□□□□ -0.18
RNF220-213ENST00000480686 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.91□□□□□ -0.18
RNF220-213ENST00000480686 MFSD4BQ5TF39 518 aa13.91□□□□□ -0.18
RNF220-213ENST00000480686 ZNF658Q5TYW1 1059 aaPredicted RBP13.91□□□□□ -0.18
RNF220-213ENST00000480686 FBXO31Q5XUX0 539 aaPredicted RBP13.91□□□□□ -0.18
RNF220-213ENST00000480686 ZNF594Q96JF6 807 aaPredicted RBP13.91□□□□□ -0.18
RNF220-213ENST00000480686 TMEM87BQ96K49 555 aa13.91□□□□□ -0.18
RNF220-213ENST00000480686 RPS6KC1Q96S38 1066 aa13.91□□□□□ -0.18
RNF220-213ENST00000480686 TCP11L1Q9NUJ3 509 aa13.91□□□□□ -0.18
RNF220-213ENST00000480686 RASAL2Q9UJF2 1139 aa13.91□□□□□ -0.18
RNF220-213ENST00000480686 TXNDC9O14530 226 aa13.91□□□□□ -0.18
RNF220-213ENST00000480686 ACTN4O43707 911 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms