RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 P3H4Q92791 437 aa12.04□□□□□ -0.48
CHD6-208ENST00000480022 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.04□□□□□ -0.48
CHD6-208ENST00000480022 SERTAD1Q9UHV2 236 aa12.04□□□□□ -0.48
CHD6-208ENST00000480022 RBM5P52756 815 aaKnown RBP eCLIP12.03□□□□□ -0.48
CHD6-208ENST00000480022 ELF3P78545 371 aaPredicted RBP12.03□□□□□ -0.48
CHD6-208ENST00000480022 CRELD2Q6UXH1 353 aaPredicted RBP12.03□□□□□ -0.48
CHD6-208ENST00000480022 FBXL16Q8N461 479 aa12.03□□□□□ -0.48
CHD6-208ENST00000480022 KRI1Q8N9T8 703 aaKnown RBP12.03□□□□□ -0.48
CHD6-208ENST00000480022 CHP1Q99653 195 aa12.03□□□□□ -0.48
CHD6-208ENST00000480022 PAIP2Q9BPZ3 127 aaKnown RBP12.03□□□□□ -0.48
CHD6-208ENST00000480022 DSCC1Q9BVC3 393 aa12.03□□□□□ -0.48
CHD6-208ENST00000480022 PPANQ9NQ55 473 aaKnown RBP12.03□□□□□ -0.48
CHD6-208ENST00000480022 JADE2Q9NQC1 790 aa12.03□□□□□ -0.48
CHD6-208ENST00000480022 CORO1CQ9ULV4 474 aaPredicted RBP12.03□□□□□ -0.48
CHD6-208ENST00000480022 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.03□□□□□ -0.48
CHD6-208ENST00000480022 SNED1Q8TER0 1413 aa12.03□□□□□ -0.48
CHD6-208ENST00000480022 SPEF2Q9C093 1822 aa12.03□□□□□ -0.48
CHD6-208ENST00000480022 ERICH2A1L162 156 aa12.03□□□□□ -0.48
CHD6-208ENST00000480022 RNF225M0QZC1 329 aaPredicted RBP12.03□□□□□ -0.48
CHD6-208ENST00000480022 KRT86O43790 486 aa12.03□□□□□ -0.48
CHD6-208ENST00000480022 STX17P56962 302 aa12.03□□□□□ -0.48
CHD6-208ENST00000480022 ITIH3Q06033 890 aa12.03□□□□□ -0.48
CHD6-208ENST00000480022 PSMD2Q13200 908 aa12.03□□□□□ -0.48
CHD6-208ENST00000480022 GLE1Q53GS7 698 aaKnown RBP12.03□□□□□ -0.48
CHD6-208ENST00000480022 CCDC181Q5TID7 509 aa12.03□□□□□ -0.48
CHD6-208ENST00000480022 KLHL10Q6JEL2 608 aa12.03□□□□□ -0.48
CHD6-208ENST00000480022 DPP8Q6V1X1 898 aaPredicted RBP12.03□□□□□ -0.48
CHD6-208ENST00000480022 NUP58Q9BVL2 599 aa12.03□□□□□ -0.48
CHD6-208ENST00000480022 POLLQ9UGP5 575 aa12.03□□□□□ -0.48
CHD6-208ENST00000480022 ZNF233A6NK53 670 aa12.02□□□□□ -0.48
CHD6-208ENST00000480022 GOLGA8BA8MQT2 603 aa12.02□□□□□ -0.48
CHD6-208ENST00000480022 HMGB1P1B2RPK0 211 aaPredicted RBP12.02□□□□□ -0.48
CHD6-208ENST00000480022 IDEP14735 1019 aa12.02□□□□□ -0.48
CHD6-208ENST00000480022 FGFR2P21802 821 aa12.02□□□□□ -0.48
CHD6-208ENST00000480022 TNFRSF8P28908 595 aa12.02□□□□□ -0.48
CHD6-208ENST00000480022 CDC25AP30304 524 aa12.02□□□□□ -0.48
CHD6-208ENST00000480022 PUM3Q15397 648 aaKnown RBP12.02□□□□□ -0.48
CHD6-208ENST00000480022 TNNI3KQ59H18 835 aa12.02□□□□□ -0.48
CHD6-208ENST00000480022 THEMIS2Q5TEJ8 643 aa12.02□□□□□ -0.48
CHD6-208ENST00000480022 IQCKQ8N0W5 287 aa12.02□□□□□ -0.48
CHD6-208ENST00000480022 DRAXINQ8NBI3 349 aaPredicted RBP12.02□□□□□ -0.48
CHD6-208ENST00000480022 TRIM58Q8NG06 486 aa12.02□□□□□ -0.48
CHD6-208ENST00000480022 ATP6V1G3Q96LB4 118 aa12.02□□□□□ -0.48
CHD6-208ENST00000480022 CCDC43Q96MW1 224 aaKnown RBP12.02□□□□□ -0.48
CHD6-208ENST00000480022 STIM2Q9P246 746 aa12.02□□□□□ -0.48
CHD6-208ENST00000480022 FPGT-TNNI3KV9GXZ4 949 aa12.02□□□□□ -0.48
CHD6-208ENST00000480022 LRRC37AA6NMS7 1700 aa12.02□□□□□ -0.48
CHD6-208ENST00000480022 GMNCA6NCL1 334 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 N4BP3O15049 544 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 POLR2DO15514 142 aaKnown RBP12.02□□□□□ -0.49
CHD6-208ENST00000480022 AHCYL1O43865 530 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 FESP07332 822 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 TIMM10P62072 90 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 HERVK_113P62684 666 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 SLC7A5Q01650 507 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 SOGA3Q5TF21 947 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 KANK3Q6NY19 840 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 ZNF662Q6ZS27 426 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 CD302Q8IX05 232 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 GRAMD1CQ8IYS0 662 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 ARFGAP2Q8N6H7 521 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 C1orf131Q8NDD1 294 aaKnown RBP12.02□□□□□ -0.49
CHD6-208ENST00000480022 TBC1D16Q8TBP0 767 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 OSBPL9Q96SU4 736 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 GPR108Q9NPR9 543 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 GPHNQ9NQX3 736 aaPredicted RBP12.02□□□□□ -0.49
CHD6-208ENST00000480022 GGA1Q9UJY5 639 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 LEMD3Q9Y2U8 911 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 BRCA1P38398 1863 aaKnown RBP12.02□□□□□ -0.49
CHD6-208ENST00000480022 ZNF804BA4D1E1 1349 aa12.02□□□□□ -0.49
CHD6-208ENST00000480022 KLF18A0A0U1RQI7 1052 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 UFL1O94874 794 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 GHRP10912 638 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 ATP2B4P23634 1241 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 CCT6AP40227 531 aaKnown RBP12.01□□□□□ -0.49
CHD6-208ENST00000480022 KRT83P78385 493 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 ITGB3BPQ13352 177 aaPredicted RBP12.01□□□□□ -0.49
CHD6-208ENST00000480022 UBE4AQ14139 1066 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 RTKN2Q8IZC4 609 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 CACNA2D3Q8IZS8 1091 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 ZNF513Q8N8E2 541 aaPredicted RBP12.01□□□□□ -0.49
CHD6-208ENST00000480022 CCHCR1Q8TD31 782 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 YIPF3Q9GZM5 350 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 NDUFB9Q9Y6M9 179 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 ATP2C2O75185 946 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 ANP32DO95626 131 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 YBX3P16989 372 aaKnown RBP eCLIP12.01□□□□□ -0.49
CHD6-208ENST00000480022 VAV2P52735 878 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 HIBCHQ6NVY1 386 aaPredicted RBP12.01□□□□□ -0.49
CHD6-208ENST00000480022 ZNF572Q7Z3I7 529 aaPredicted RBP12.01□□□□□ -0.49
CHD6-208ENST00000480022 LPIN2Q92539 896 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 HVCN1Q96D96 273 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 SEC16BQ96JE7 1060 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 GPR101Q96P66 508 aaPredicted RBP12.01□□□□□ -0.49
CHD6-208ENST00000480022 TFR2Q9UP52 801 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 HPS5Q9UPZ3 1129 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 LIN7AO14910 233 aaPredicted RBP12.01□□□□□ -0.49
CHD6-208ENST00000480022 NEFHP12036 1026 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 KLRK1P26718 216 aa12.01□□□□□ -0.49
CHD6-208ENST00000480022 CUL4BQ13620 913 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms