RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 A6NJR5 290 aa20.55■□□□□ 0.88
HMGN1-212ENST00000479586 ALADP13716 330 aa20.55■□□□□ 0.88
HMGN1-212ENST00000479586 PDE4BQ07343 736 aa20.55■□□□□ 0.88
HMGN1-212ENST00000479586 PTGISQ16647 500 aa20.55■□□□□ 0.88
HMGN1-212ENST00000479586 CSPP1Q1MSJ5 1256 aa20.55■□□□□ 0.88
HMGN1-212ENST00000479586 IFNL3Q8IZI9 196 aa20.55■□□□□ 0.88
HMGN1-212ENST00000479586 KBTBD3Q8NAB2 608 aa20.55■□□□□ 0.88
HMGN1-212ENST00000479586 RAD9AQ99638 391 aa20.55■□□□□ 0.88
HMGN1-212ENST00000479586 STX8Q9UNK0 236 aa20.55■□□□□ 0.88
HMGN1-212ENST00000479586 MTMR7Q9Y216 660 aa20.55■□□□□ 0.88
HMGN1-212ENST00000479586 TRIOO75962 3097 aa20.54■□□□□ 0.88
HMGN1-212ENST00000479586 PTPDC1A2A3K4 754 aa20.54■□□□□ 0.88
HMGN1-212ENST00000479586 RNF113AO15541 343 aaKnown RBP20.54■□□□□ 0.88
HMGN1-212ENST00000479586 SMARCA5O60264 1052 aaPredicted RBP20.54■□□□□ 0.88
HMGN1-212ENST00000479586 KPNA6O60684 536 aa20.54■□□□□ 0.88
HMGN1-212ENST00000479586 GJB5O95377 273 aa20.54■□□□□ 0.88
HMGN1-212ENST00000479586 GNAT2P19087 354 aa20.54■□□□□ 0.88
HMGN1-212ENST00000479586 CNKSR3Q6P9H4 555 aa20.54■□□□□ 0.88
HMGN1-212ENST00000479586 CAGE1Q8TC20 777 aa20.54■□□□□ 0.88
HMGN1-212ENST00000479586 AFAP1L1Q8TED9 768 aa20.54■□□□□ 0.88
HMGN1-212ENST00000479586 DHX38Q92620 1227 aaKnown RBP20.54■□□□□ 0.88
HMGN1-212ENST00000479586 FBXL18Q96ME1 805 aa20.54■□□□□ 0.88
HMGN1-212ENST00000479586 LOC102724159A0A0B4J2E5 919 aa20.53■□□□□ 0.88
HMGN1-212ENST00000479586 GRXCR2A6NFK2 248 aa20.53■□□□□ 0.88
HMGN1-212ENST00000479586 PATL2C9JE40 543 aaKnown RBP20.53■□□□□ 0.88
HMGN1-212ENST00000479586 NKRFO15226 690 aaKnown RBP eCLIP20.53■□□□□ 0.88
HMGN1-212ENST00000479586 NMT2O60551 498 aa20.53■□□□□ 0.88
HMGN1-212ENST00000479586 CALML3P27482 149 aa20.53■□□□□ 0.88
HMGN1-212ENST00000479586 PWP2Q15269 919 aaKnown RBP20.53■□□□□ 0.88
HMGN1-212ENST00000479586 GDF6Q6KF10 455 aaPredicted RBP20.53■□□□□ 0.88
HMGN1-212ENST00000479586 FAM117BQ6P1L5 589 aa20.53■□□□□ 0.88
HMGN1-212ENST00000479586 LRRC8DQ7L1W4 858 aa20.53■□□□□ 0.88
HMGN1-212ENST00000479586 CCDC155Q8N6L0 562 aa20.53■□□□□ 0.88
HMGN1-212ENST00000479586 RANBP17Q9H2T7 1088 aaKnown RBP20.53■□□□□ 0.88
HMGN1-212ENST00000479586 CCER2I3L3R5 266 aa20.52■□□□□ 0.88
HMGN1-212ENST00000479586 NBNO60934 754 aa20.52■□□□□ 0.88
HMGN1-212ENST00000479586 ARIH2O95376 493 aa20.52■□□□□ 0.88
HMGN1-212ENST00000479586 SELPP16109 830 aa20.52■□□□□ 0.88
HMGN1-212ENST00000479586 SLC16A2P36021 539 aa20.52■□□□□ 0.88
HMGN1-212ENST00000479586 PDE4DQ08499 809 aa20.52■□□□□ 0.88
HMGN1-212ENST00000479586 CCDC96Q2M329 555 aa20.52■□□□□ 0.88
HMGN1-212ENST00000479586 TTBK2Q6IQ55 1244 aa20.52■□□□□ 0.88
HMGN1-212ENST00000479586 SCFD2Q8WU76 684 aa20.52■□□□□ 0.88
HMGN1-212ENST00000479586 IL17RBQ9NRM6 502 aa20.52■□□□□ 0.88
HMGN1-212ENST00000479586 ECHDC1Q9NTX5 307 aa20.52■□□□□ 0.88
HMGN1-212ENST00000479586 ZBTB40Q9NUA8 1239 aa20.52■□□□□ 0.88
HMGN1-212ENST00000479586 ZNF318Q5VUA4 2279 aa20.51■□□□□ 0.87
HMGN1-212ENST00000479586 H3BQ06 376 aaPredicted RBP20.51■□□□□ 0.87
HMGN1-212ENST00000479586 DCXO43602 365 aa20.51■□□□□ 0.87
HMGN1-212ENST00000479586 CXCL10P02778 98 aa20.51■□□□□ 0.87
HMGN1-212ENST00000479586 TXNP10599 105 aaKnown RBP20.51■□□□□ 0.87
HMGN1-212ENST00000479586 EDNRBP24530 442 aa20.51■□□□□ 0.87
HMGN1-212ENST00000479586 PPARAQ07869 468 aa20.51■□□□□ 0.87
HMGN1-212ENST00000479586 TSHZ3Q63HK5 1081 aa20.51■□□□□ 0.87
HMGN1-212ENST00000479586 CLEC4DQ8WXI8 215 aa20.51■□□□□ 0.87
HMGN1-212ENST00000479586 SNX27Q96L92 541 aa20.51■□□□□ 0.87
HMGN1-212ENST00000479586 C17orf80Q9BSJ5 609 aa20.51■□□□□ 0.87
HMGN1-212ENST00000479586 LRRCC1Q9C099 1032 aa20.51■□□□□ 0.87
HMGN1-212ENST00000479586 SLC3A2P08195 630 aaKnown RBP20.5■□□□□ 0.87
HMGN1-212ENST00000479586 FBXO22Q8NEZ5 403 aa20.5■□□□□ 0.87
HMGN1-212ENST00000479586 NEK9Q8TD19 979 aa20.5■□□□□ 0.87
HMGN1-212ENST00000479586 ANKS1AQ92625 1134 aa20.5■□□□□ 0.87
HMGN1-212ENST00000479586 CRBNQ96SW2 442 aa20.5■□□□□ 0.87
HMGN1-212ENST00000479586 SEC62Q99442 399 aaKnown RBP20.5■□□□□ 0.87
HMGN1-212ENST00000479586 NACAP1Q9BZK3 213 aa20.5■□□□□ 0.87
HMGN1-212ENST00000479586 INCENPQ9NQS7 918 aa20.5■□□□□ 0.87
HMGN1-212ENST00000479586 C5orf42Q9H799 3197 aa20.49■□□□□ 0.87
HMGN1-212ENST00000479586 ABHD14A-ACY1A0A1B0GW23 586 aa20.49■□□□□ 0.87
HMGN1-212ENST00000479586 POTEB3A0JP26 581 aa20.49■□□□□ 0.87
HMGN1-212ENST00000479586 TSPY2A6NKD2 308 aa20.49■□□□□ 0.87
HMGN1-212ENST00000479586 ZFYP08048 801 aaPredicted RBP20.49■□□□□ 0.87
HMGN1-212ENST00000479586 CKBP12277 381 aa20.49■□□□□ 0.87
HMGN1-212ENST00000479586 RBL2Q08999 1139 aa20.49■□□□□ 0.87
HMGN1-212ENST00000479586 PPP4R3BQ5MIZ7 849 aa20.49■□□□□ 0.87
HMGN1-212ENST00000479586 POTEBQ6S5H4 581 aa20.49■□□□□ 0.87
HMGN1-212ENST00000479586 RNF207Q6ZRF8 634 aa20.49■□□□□ 0.87
HMGN1-212ENST00000479586 SESTD1Q86VW0 696 aa20.49■□□□□ 0.87
HMGN1-212ENST00000479586 AFG1LQ8WV93 481 aa20.49■□□□□ 0.87
HMGN1-212ENST00000479586 NAPBQ9H115 298 aa20.49■□□□□ 0.87
HMGN1-212ENST00000479586 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.49■□□□□ 0.87
HMGN1-212ENST00000479586 RPS6P62753 249 aaKnown RBP20.48■□□□□ 0.87
HMGN1-212ENST00000479586 SYDE2Q5VT97 1194 aa20.48■□□□□ 0.87
HMGN1-212ENST00000479586 DCAF4Q8WV16 495 aa20.48■□□□□ 0.87
HMGN1-212ENST00000479586 KAT2BQ92831 832 aa20.48■□□□□ 0.87
HMGN1-212ENST00000479586 KCNH6Q9H252 994 aa20.48■□□□□ 0.87
HMGN1-212ENST00000479586 PARNO95453 639 aaKnown RBP20.47■□□□□ 0.87
HMGN1-212ENST00000479586 MMP3P08254 477 aa20.47■□□□□ 0.87
HMGN1-212ENST00000479586 ZP2Q05996 745 aa20.47■□□□□ 0.87
HMGN1-212ENST00000479586 CTDSPL2Q05D32 466 aa20.47■□□□□ 0.87
HMGN1-212ENST00000479586 PUS10Q3MIT2 529 aaKnown RBP20.47■□□□□ 0.87
HMGN1-212ENST00000479586 BTNL9Q6UXG8 535 aa20.47■□□□□ 0.87
HMGN1-212ENST00000479586 MRPL38Q96DV4 380 aaKnown RBP20.47■□□□□ 0.87
HMGN1-212ENST00000479586 DDX19BQ9UMR2 479 aa20.47■□□□□ 0.87
HMGN1-212ENST00000479586 FRMPD2Q68DX3 1309 aaPredicted RBP20.47■□□□□ 0.87
HMGN1-212ENST00000479586 IKBKEQ14164 716 aa20.46■□□□□ 0.87
HMGN1-212ENST00000479586 MBTPS1Q14703 1052 aa20.46■□□□□ 0.87
HMGN1-212ENST00000479586 TRAF7Q6Q0C0 670 aa20.46■□□□□ 0.87
HMGN1-212ENST00000479586 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.46■□□□□ 0.874e-8■□□□□ 11
HMGN1-212ENST00000479586 HFE2Q6ZVN8 426 aa20.46■□□□□ 0.87
HMGN1-212ENST00000479586 MPHOSPH6Q99547 160 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms