RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 DUSP28Q4G0W2 176 aa23.96■■□□□ 1.43
PKP4-209ENST00000479398 ARHGEF16Q5VV41 709 aa23.96■■□□□ 1.43
PKP4-209ENST00000479398 TMTC3Q6ZXV5 915 aa23.96■■□□□ 1.43
PKP4-209ENST00000479398 FBXL16Q8N461 479 aa23.96■■□□□ 1.43
PKP4-209ENST00000479398 CCDC82Q8N4S0 544 aa23.96■■□□□ 1.43
PKP4-209ENST00000479398 RBM28Q9NW13 759 aaKnown RBP23.96■■□□□ 1.43
PKP4-209ENST00000479398 KLF18A0A0U1RQI7 1052 aa23.95■■□□□ 1.42
PKP4-209ENST00000479398 A0A1W2PQ45 241 aaPredicted RBP23.95■■□□□ 1.42
PKP4-209ENST00000479398 A0A1W2PQY0 241 aa23.95■■□□□ 1.42
PKP4-209ENST00000479398 RPS6KB1P23443 525 aa23.95■■□□□ 1.42
PKP4-209ENST00000479398 HOXA13P31271 388 aaPredicted RBP23.95■■□□□ 1.42
PKP4-209ENST00000479398 RTP1P59025 263 aa23.95■■□□□ 1.42
PKP4-209ENST00000479398 SNX17Q15036 470 aa23.95■■□□□ 1.42
PKP4-209ENST00000479398 STXBP2Q15833 593 aa23.95■■□□□ 1.42
PKP4-209ENST00000479398 C1orf53Q5VUE5 145 aa23.95■■□□□ 1.42
PKP4-209ENST00000479398 TLK2Q86UE8 772 aa23.95■■□□□ 1.42
PKP4-209ENST00000479398 PXMP2Q9NR77 195 aa23.95■■□□□ 1.42
PKP4-209ENST00000479398 ZMYND8Q9ULU4 1186 aaPredicted RBP23.95■■□□□ 1.42
PKP4-209ENST00000479398 DNAH12Q6ZR08 3092 aa23.95■■□□□ 1.42
PKP4-209ENST00000479398 ASGR1P07306 291 aa23.94■■□□□ 1.42
PKP4-209ENST00000479398 CASTP20810 708 aaKnown RBP23.94■■□□□ 1.42
PKP4-209ENST00000479398 PTGS1P23219 599 aa23.94■■□□□ 1.42
PKP4-209ENST00000479398 RTN1Q16799 776 aa23.94■■□□□ 1.42
PKP4-209ENST00000479398 SCFD2Q8WU76 684 aa23.94■■□□□ 1.42
PKP4-209ENST00000479398 COLQQ9Y215 455 aaPredicted RBP23.94■■□□□ 1.42
PKP4-209ENST00000479398 ATP11BQ9Y2G3 1177 aa23.94■■□□□ 1.42
PKP4-209ENST00000479398 NR3C2P08235 984 aa23.93■■□□□ 1.42
PKP4-209ENST00000479398 SYN1P17600 705 aa23.93■■□□□ 1.42
PKP4-209ENST00000479398 EIF2AK2P19525 551 aaKnown RBP23.93■■□□□ 1.42
PKP4-209ENST00000479398 RCAN1P53805 252 aa23.93■■□□□ 1.42
PKP4-209ENST00000479398 BEX3Q00994 111 aa23.93■■□□□ 1.42
PKP4-209ENST00000479398 APOBRQ0VD83 1088 aa23.93■■□□□ 1.42
PKP4-209ENST00000479398 BRF1Q92994 677 aa23.93■■□□□ 1.42
PKP4-209ENST00000479398 AGXT2Q9BYV1 514 aa23.93■■□□□ 1.42
PKP4-209ENST00000479398 ZSWIM6Q9HCJ5 1215 aa23.93■■□□□ 1.42
PKP4-209ENST00000479398 STARD7Q9NQZ5 370 aa23.93■■□□□ 1.42
PKP4-209ENST00000479398 FAM217BQ9NTX9 383 aaPredicted RBP23.93■■□□□ 1.42
PKP4-209ENST00000479398 EIF3JO75822 258 aaKnown RBP23.92■■□□□ 1.42
PKP4-209ENST00000479398 PPP2R5BQ15173 497 aa23.92■■□□□ 1.42
PKP4-209ENST00000479398 FSCN1Q16658 493 aaKnown RBP23.92■■□□□ 1.42
PKP4-209ENST00000479398 TRIM60Q495X7 471 aa23.92■■□□□ 1.42
PKP4-209ENST00000479398 CHRDL2Q6WN34 429 aa23.92■■□□□ 1.42
PKP4-209ENST00000479398 RUFY3Q7L099 469 aa23.92■■□□□ 1.42
PKP4-209ENST00000479398 FCHSD1Q86WN1 690 aa23.92■■□□□ 1.42
PKP4-209ENST00000479398 GLT1D1Q96MS3 346 aa23.92■■□□□ 1.42
PKP4-209ENST00000479398 NAP1L2Q9ULW6 460 aaPredicted RBP23.92■■□□□ 1.42
PKP4-209ENST00000479398 ELP1O95163 1332 aa23.91■■□□□ 1.42
PKP4-209ENST00000479398 hCG_1642624A0A1W2PR95 340 aa23.91■■□□□ 1.42
PKP4-209ENST00000479398 GOLGA8AA7E2F4 631 aa23.91■■□□□ 1.42
PKP4-209ENST00000479398 GOLGA8BA8MQT2 603 aa23.91■■□□□ 1.42
PKP4-209ENST00000479398 NKRFO15226 690 aaKnown RBP eCLIP23.91■■□□□ 1.421e-8■□□□□ 10.1
PKP4-209ENST00000479398 TXNP10599 105 aaKnown RBP23.91■■□□□ 1.42
PKP4-209ENST00000479398 SEPT14Q6ZU15 432 aa23.91■■□□□ 1.42
PKP4-209ENST00000479398 VTI1AQ96AJ9 217 aa23.91■■□□□ 1.42
PKP4-209ENST00000479398 PDCD2LQ9BRP1 358 aa23.91■■□□□ 1.42
PKP4-209ENST00000479398 TM6SF1Q9BZW5 370 aa23.91■■□□□ 1.42
PKP4-209ENST00000479398 ZEB2O60315 1214 aa23.9■■□□□ 1.42
PKP4-209ENST00000479398 CDC27P30260 824 aa23.9■■□□□ 1.42
PKP4-209ENST00000479398 FUT2Q10981 343 aa23.9■■□□□ 1.42
PKP4-209ENST00000479398 TTLL4Q14679 1199 aa23.9■■□□□ 1.42
PKP4-209ENST00000479398 CCDC62Q6P9F0 684 aa23.9■■□□□ 1.42
PKP4-209ENST00000479398 VSIG10LQ86VR7 867 aa23.9■■□□□ 1.42
PKP4-209ENST00000479398 CYP46A1Q9Y6A2 500 aa23.9■■□□□ 1.42
PKP4-209ENST00000479398 V9GY48 417 aaPredicted RBP23.9■■□□□ 1.42
PKP4-209ENST00000479398 KIAA1217Q5T5P2 1943 aa23.9■■□□□ 1.42
PKP4-209ENST00000479398 CCDC196A0A1B0GTZ2 297 aa23.89■■□□□ 1.41
PKP4-209ENST00000479398 MYCLP12524 364 aaPredicted RBP23.89■■□□□ 1.41
PKP4-209ENST00000479398 ADD1P35611 737 aaKnown RBP23.89■■□□□ 1.41
PKP4-209ENST00000479398 TLE2Q04725 743 aa23.89■■□□□ 1.41
PKP4-209ENST00000479398 PGM5Q15124 567 aa23.89■■□□□ 1.41
PKP4-209ENST00000479398 PRO3102Q9H379 93 aa23.89■■□□□ 1.41
PKP4-209ENST00000479398 CNTNAP5Q8WYK1 1306 aa23.88■■□□□ 1.41
PKP4-209ENST00000479398 PIK3CDO00329 1044 aa23.88■■□□□ 1.41
PKP4-209ENST00000479398 MEIS2O14770 477 aa23.88■■□□□ 1.41
PKP4-209ENST00000479398 CABYRO75952 493 aa23.88■■□□□ 1.41
PKP4-209ENST00000479398 ARIH2O95376 493 aa23.88■■□□□ 1.41
PKP4-209ENST00000479398 METAP2P50579 478 aaKnown RBP eCLIP23.88■■□□□ 1.419e-10■■□□□ 11.4
PKP4-209ENST00000479398 EVCP57679 992 aa23.88■■□□□ 1.41
PKP4-209ENST00000479398 HABP4Q5JVS0 413 aaKnown RBP23.88■■□□□ 1.41
PKP4-209ENST00000479398 USP17L6PQ6QN14 398 aa23.88■■□□□ 1.41
PKP4-209ENST00000479398 CXCL17Q6UXB2 119 aa23.88■■□□□ 1.41
PKP4-209ENST00000479398 OR6J1Q8NGC5 347 aa23.88■■□□□ 1.41
PKP4-209ENST00000479398 SMARCC2Q8TAQ2 1214 aa23.88■■□□□ 1.41
PKP4-209ENST00000479398 COPS5Q92905 334 aa23.88■■□□□ 1.41
PKP4-209ENST00000479398 CUL5Q93034 780 aa23.88■■□□□ 1.41
PKP4-209ENST00000479398 GDF15Q99988 308 aa23.88■■□□□ 1.41
PKP4-209ENST00000479398 PSTPIP2Q9H939 334 aa23.88■■□□□ 1.41
PKP4-209ENST00000479398 EIF5BO60841 1220 aaKnown RBP23.87■■□□□ 1.41
PKP4-209ENST00000479398 CDK7P50613 346 aa23.87■■□□□ 1.41
PKP4-209ENST00000479398 TOX2Q96NM4 488 aa23.87■■□□□ 1.41
PKP4-209ENST00000479398 RBM27Q9P2N5 1060 aaKnown RBP23.87■■□□□ 1.41
PKP4-209ENST00000479398 PRKAG2Q9UGJ0 569 aa23.87■■□□□ 1.41
PKP4-209ENST00000479398 ARVCFO00192 962 aa23.86■■□□□ 1.41
PKP4-209ENST00000479398 CPT1AP50416 773 aa23.86■■□□□ 1.41
PKP4-209ENST00000479398 LY6KQ17RY6 165 aa23.86■■□□□ 1.41
PKP4-209ENST00000479398 ANKRD33Q7Z3H0 272 aa23.86■■□□□ 1.41
PKP4-209ENST00000479398 HEATR3Q7Z4Q2 680 aa23.86■■□□□ 1.41
PKP4-209ENST00000479398 IL31RAQ8NI17 732 aa23.86■■□□□ 1.41
PKP4-209ENST00000479398 DDX41Q9UJV9 622 aaKnown RBP23.86■■□□□ 1.41
PKP4-209ENST00000479398 A0A0U1RQG5 324 aaPredicted RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms