RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 ZSWIM6Q9HCJ5 1215 aa10.54□□□□□ -0.72
CMTM1-208ENST00000479381 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.53□□□□□ -0.72
CMTM1-208ENST00000479381 DCDC2CA8MYV0 355 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 ASGR1P07306 291 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 MYL3P08590 195 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 RAG1P15918 1043 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 EIF2AK2P19525 551 aaKnown RBP10.53□□□□□ -0.72
CMTM1-208ENST00000479381 ACLYP53396 1101 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 GRM4Q14833 912 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 SEC23AQ15436 765 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 STOX1Q6ZVD7 989 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.53□□□□□ -0.72
CMTM1-208ENST00000479381 ZNF654Q8IZM8 581 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 TMEM87BQ96K49 555 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 FGD4Q96M96 766 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 TSEN34Q9BSV6 310 aaKnown RBP10.53□□□□□ -0.72
CMTM1-208ENST00000479381 WDR11Q9BZH6 1224 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 LSG1Q9H089 658 aaKnown RBP10.53□□□□□ -0.72
CMTM1-208ENST00000479381 JMJD4Q9H9V9 463 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 PDGFCQ9NRA1 345 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 PCDH10Q9P2E7 1040 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 PHF24Q9UPV7 400 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 PCDHA1Q9Y5I3 950 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 SLC12A7Q9Y666 1083 aa10.53□□□□□ -0.72
CMTM1-208ENST00000479381 A0A0U1RQG5 324 aaPredicted RBP10.52□□□□□ -0.73
CMTM1-208ENST00000479381 MYADML2A6NDP7 307 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 ZBTB5O15062 677 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 ADAMTS4O75173 837 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 DDAH1O94760 285 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 CLTBP09497 229 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 MYCLP12524 364 aaPredicted RBP10.52□□□□□ -0.73
CMTM1-208ENST00000479381 RXRAP19793 462 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 GNAQP50148 359 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 TLE2Q04725 743 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 FSCN1Q16658 493 aaKnown RBP10.52□□□□□ -0.73
CMTM1-208ENST00000479381 FAM47CQ5HY64 1035 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 IQSEC1Q6DN90 963 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 SEPT14Q6ZU15 432 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 FCHSD1Q86WN1 690 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 MICU3Q86XE3 530 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 MB21D2Q8IYB1 491 aaPredicted RBP10.52□□□□□ -0.73
CMTM1-208ENST00000479381 TMTC2Q8N394 836 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 DNERQ8NFT8 737 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 CLEC4DQ8WXI8 215 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 CUL5Q93034 780 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 RRP36Q96EU6 259 aaKnown RBP10.52□□□□□ -0.73
CMTM1-208ENST00000479381 NEK1Q96PY6 1258 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 PIGSQ96S52 555 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 RMDN3Q96TC7 470 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 TMEM39AQ9NV64 488 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 MAD2L2Q9UI95 211 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 TAF6LQ9Y6J9 622 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 MKI67P46013 3256 aaKnown RBP10.52□□□□□ -0.73
CMTM1-208ENST00000479381 MROH7Q68CQ1 1323 aa10.52□□□□□ -0.73
CMTM1-208ENST00000479381 LRRC37A2A6NM11 1700 aa10.51□□□□□ -0.73
CMTM1-208ENST00000479381 GCOM1H8Y6P7 765 aaPredicted RBP10.51□□□□□ -0.73
CMTM1-208ENST00000479381 POLR2MP0CAP2 368 aa10.51□□□□□ -0.73
CMTM1-208ENST00000479381 CALM1P0DP23 149 aa10.51□□□□□ -0.73
CMTM1-208ENST00000479381 CALM2P0DP24 149 aa10.51□□□□□ -0.73
CMTM1-208ENST00000479381 CALM3P0DP25 149 aa10.51□□□□□ -0.73
CMTM1-208ENST00000479381 TXNP10599 105 aaKnown RBP10.51□□□□□ -0.73
CMTM1-208ENST00000479381 SMPD1P17405 629 aa10.51□□□□□ -0.73
CMTM1-208ENST00000479381 CPT1AP50416 773 aa10.51□□□□□ -0.73
CMTM1-208ENST00000479381 GJA9P57773 515 aa10.51□□□□□ -0.73
CMTM1-208ENST00000479381 KRT32Q14532 448 aa10.51□□□□□ -0.73
CMTM1-208ENST00000479381 TTLL4Q14679 1199 aa10.51□□□□□ -0.73
CMTM1-208ENST00000479381 CXCL17Q6UXB2 119 aa10.51□□□□□ -0.73
CMTM1-208ENST00000479381 CCDC82Q8N4S0 544 aa10.51□□□□□ -0.73
CMTM1-208ENST00000479381 SMARCC2Q8TAQ2 1214 aa10.51□□□□□ -0.73
CMTM1-208ENST00000479381 NSUN6Q8TEA1 469 aaKnown RBP10.51□□□□□ -0.73
CMTM1-208ENST00000479381 SCFD2Q8WU76 684 aa10.51□□□□□ -0.73
CMTM1-208ENST00000479381 SENP2Q9HC62 589 aa10.51□□□□□ -0.73
CMTM1-208ENST00000479381 CEP290O15078 2479 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 LOC102724159A0A0B4J2E5 919 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 PALM3A6NDB9 673 aaPredicted RBP10.5□□□□□ -0.73
CMTM1-208ENST00000479381 SH2B2O14492 632 aaPredicted RBP10.5□□□□□ -0.73
CMTM1-208ENST00000479381 REC8O95072 547 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 IGHA2P01877 340 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 HOXB1P14653 301 aaPredicted RBP10.5□□□□□ -0.73
CMTM1-208ENST00000479381 HOXA13P31271 388 aaPredicted RBP10.5□□□□□ -0.73
CMTM1-208ENST00000479381 ANTXR2P58335 489 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 FOXK1P85037 733 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 PWP2Q15269 919 aaKnown RBP10.5□□□□□ -0.73
CMTM1-208ENST00000479381 STXBP2Q15833 593 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 PLPP6Q8IY26 295 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 TDHQ8IZJ6 230 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 SYTL5Q8TDW5 730 aaPredicted RBP10.5□□□□□ -0.73
CMTM1-208ENST00000479381 TBC1D5Q92609 795 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 BADQ92934 168 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 TCEANC2Q96MN5 208 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 TAAR1Q96RJ0 339 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 PPP1R12CQ9BZL4 782 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 LY9Q9HBG7 655 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 POLR3EQ9NVU0 708 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 NOD1Q9Y239 953 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 MRVI1Q9Y6F6 885 aa10.5□□□□□ -0.73
CMTM1-208ENST00000479381 BAZ2BQ9UIF8 2168 aaKnown RBP10.49□□□□□ -0.73
CMTM1-208ENST00000479381 LCTP09848 1927 aa10.49□□□□□ -0.73
CMTM1-208ENST00000479381 PNMA6FA0A0J9YX94 578 aa10.49□□□□□ -0.73
CMTM1-208ENST00000479381 A0A1W2PPC1 479 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms