RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 V9GY48 417 aaPredicted RBP17.84■□□□□ 0.45
C9orf3-217ENST00000479161 MEIS2O14770 477 aa17.83■□□□□ 0.44
C9orf3-217ENST00000479161 NKRFO15226 690 aaKnown RBP eCLIP17.83■□□□□ 0.449e-10■■■■■ 29
C9orf3-217ENST00000479161 ADAMTS4O75173 837 aa17.83■□□□□ 0.44
C9orf3-217ENST00000479161 EIF3JO75822 258 aaKnown RBP17.83■□□□□ 0.44
C9orf3-217ENST00000479161 STAM2O75886 525 aa17.83■□□□□ 0.44
C9orf3-217ENST00000479161 GJA9P57773 515 aa17.83■□□□□ 0.44
C9orf3-217ENST00000479161 PDE4DQ08499 809 aa17.83■□□□□ 0.44
C9orf3-217ENST00000479161 STXBP2Q15833 593 aa17.83■□□□□ 0.44
C9orf3-217ENST00000479161 PFKFB3Q16875 520 aaPredicted RBP17.83■□□□□ 0.44
C9orf3-217ENST00000479161 XRRA1Q6P2D8 792 aa17.83■□□□□ 0.44
C9orf3-217ENST00000479161 RAB11FIP4Q86YS3 637 aa17.83■□□□□ 0.44
C9orf3-217ENST00000479161 KLHDC9Q8NEP7 349 aa17.83■□□□□ 0.44
C9orf3-217ENST00000479161 PAWRQ96IZ0 340 aaKnown RBP17.83■□□□□ 0.44
C9orf3-217ENST00000479161 SPC25Q9HBM1 224 aa17.83■□□□□ 0.44
C9orf3-217ENST00000479161 BARHL2Q9NY43 387 aa17.83■□□□□ 0.44
C9orf3-217ENST00000479161 GNEQ9Y223 722 aaKnown RBP17.83■□□□□ 0.44
C9orf3-217ENST00000479161 NR3C2P08235 984 aa17.82■□□□□ 0.44
C9orf3-217ENST00000479161 TNFAIP2Q03169 654 aa17.82■□□□□ 0.44
C9orf3-217ENST00000479161 LRRC41Q15345 812 aa17.82■□□□□ 0.44
C9orf3-217ENST00000479161 DUSP28Q4G0W2 176 aa17.82■□□□□ 0.44
C9orf3-217ENST00000479161 ARHGEF16Q5VV41 709 aa17.82■□□□□ 0.44
C9orf3-217ENST00000479161 VSIG10LQ86VR7 867 aa17.82■□□□□ 0.44
C9orf3-217ENST00000479161 CCDC82Q8N4S0 544 aa17.82■□□□□ 0.44
C9orf3-217ENST00000479161 SCFD2Q8WU76 684 aa17.82■□□□□ 0.44
C9orf3-217ENST00000479161 CUL5Q93034 780 aa17.82■□□□□ 0.44
C9orf3-217ENST00000479161 PDCD2LQ9BRP1 358 aa17.82■□□□□ 0.44
C9orf3-217ENST00000479161 C11orf49Q9H6J7 331 aa17.82■□□□□ 0.44
C9orf3-217ENST00000479161 PSTPIP2Q9H939 334 aa17.82■□□□□ 0.44
C9orf3-217ENST00000479161 ESYT2A0FGR8 921 aa17.81■□□□□ 0.44
C9orf3-217ENST00000479161 MOXD2PA6NHM9 499 aa17.81■□□□□ 0.44
C9orf3-217ENST00000479161 KBTBD13C9JR72 458 aa17.81■□□□□ 0.44
C9orf3-217ENST00000479161 C1orf53Q5VUE5 145 aa17.81■□□□□ 0.44
C9orf3-217ENST00000479161 MCTP2Q6DN12 878 aa17.81■□□□□ 0.44
C9orf3-217ENST00000479161 CCSAPQ6IQ19 270 aaPredicted RBP17.81■□□□□ 0.44
C9orf3-217ENST00000479161 KCNV1Q6PIU1 500 aa17.81■□□□□ 0.44
C9orf3-217ENST00000479161 CPLX2Q6PUV4 134 aaKnown RBP17.81■□□□□ 0.44
C9orf3-217ENST00000479161 NAP1L2Q9ULW6 460 aaPredicted RBP17.81■□□□□ 0.44
C9orf3-217ENST00000479161 PHF24Q9UPV7 400 aa17.81■□□□□ 0.44
C9orf3-217ENST00000479161 CEP290O15078 2479 aa17.81■□□□□ 0.44
C9orf3-217ENST00000479161 SYNRGQ9UMZ2 1314 aa17.8■□□□□ 0.44
C9orf3-217ENST00000479161 TGFB3P10600 412 aa17.8■□□□□ 0.44
C9orf3-217ENST00000479161 SCG2P13521 617 aa17.8■□□□□ 0.44
C9orf3-217ENST00000479161 WWC2Q6AWC2 1192 aa17.8■□□□□ 0.44
C9orf3-217ENST00000479161 PCSK9Q8NBP7 692 aaKnown RBP17.8■□□□□ 0.44
C9orf3-217ENST00000479161 CCDC12Q8WUD4 166 aaPredicted RBP17.8■□□□□ 0.44
C9orf3-217ENST00000479161 PIBF1Q8WXW3 757 aa17.8■□□□□ 0.44
C9orf3-217ENST00000479161 RIC8AQ9NPQ8 531 aa17.8■□□□□ 0.44
C9orf3-217ENST00000479161 SH3GLB2Q9NR46 395 aa17.8■□□□□ 0.44
C9orf3-217ENST00000479161 GTF3C3Q9Y5Q9 886 aa17.8■□□□□ 0.44
C9orf3-217ENST00000479161 STXBP3O00186 592 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 ADCY6O43306 1168 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 PFKFB2O60825 505 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 FOSP01100 380 aaPredicted RBP17.79■□□□□ 0.44
C9orf3-217ENST00000479161 SMPD1P17405 629 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 HOXA13P31271 388 aaPredicted RBP17.79■□□□□ 0.44
C9orf3-217ENST00000479161 ADCYAP1R1P41586 468 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 NEK4P51957 841 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 AK2P54819 239 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 AKAP17AQ02040 695 aaKnown RBP17.79■□□□□ 0.44
C9orf3-217ENST00000479161 TTLL4Q14679 1199 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 PGM5Q15124 567 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 PKN1Q16512 942 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 CCDC62Q6P9F0 684 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 HEATR3Q7Z4Q2 680 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 FBXO16Q8IX29 292 aaPredicted RBP17.79■□□□□ 0.44
C9orf3-217ENST00000479161 SMARCC2Q8TAQ2 1214 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 DIS3LQ8TF46 1054 aaKnown RBP17.79■□□□□ 0.44
C9orf3-217ENST00000479161 SEZ6LQ9BYH1 1024 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 C22orf23Q9BZE7 217 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 WDR11Q9BZH6 1224 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 UPF2Q9HAU5 1272 aaKnown RBP17.79■□□□□ 0.44
C9orf3-217ENST00000479161 PDGFCQ9NRA1 345 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 DNAH12Q6ZR08 3092 aa17.79■□□□□ 0.44
C9orf3-217ENST00000479161 ALPK3Q96L96 1907 aa17.78■□□□□ 0.44
C9orf3-217ENST00000479161 CTAGE5O15320 804 aa17.78■□□□□ 0.44
C9orf3-217ENST00000479161 CDKL5O76039 1030 aa17.78■□□□□ 0.44
C9orf3-217ENST00000479161 CCND2P30279 289 aa17.78■□□□□ 0.44
C9orf3-217ENST00000479161 SNX17Q15036 470 aa17.78■□□□□ 0.44
C9orf3-217ENST00000479161 GJC2Q5T442 439 aaPredicted RBP17.78■□□□□ 0.44
C9orf3-217ENST00000479161 TRIM22Q8IYM9 498 aa17.78■□□□□ 0.44
C9orf3-217ENST00000479161 KIF2CQ99661 725 aa17.78■□□□□ 0.44
C9orf3-217ENST00000479161 ZMYND12Q9H0C1 365 aa17.78■□□□□ 0.44
C9orf3-217ENST00000479161 SLKQ9H2G2 1235 aaPredicted RBP17.78■□□□□ 0.44
C9orf3-217ENST00000479161 TPCN1Q9ULQ1 816 aa17.78■□□□□ 0.44
C9orf3-217ENST00000479161 ELP1O95163 1332 aa17.77■□□□□ 0.44
C9orf3-217ENST00000479161 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.77■□□□□ 0.44
C9orf3-217ENST00000479161 hCG_1642624A0A1W2PR95 340 aa17.77■□□□□ 0.44
C9orf3-217ENST00000479161 CPLX1O14810 134 aa17.77■□□□□ 0.44
C9orf3-217ENST00000479161 PGK1P00558 417 aa17.77■□□□□ 0.44
C9orf3-217ENST00000479161 EIF2AK2P19525 551 aaKnown RBP17.77■□□□□ 0.44
C9orf3-217ENST00000479161 NAPAP54920 295 aa17.77■□□□□ 0.44
C9orf3-217ENST00000479161 CCT2P78371 535 aaKnown RBP17.77■□□□□ 0.44
C9orf3-217ENST00000479161 AP3B2Q13367 1082 aa17.77■□□□□ 0.44
C9orf3-217ENST00000479161 ANO1Q5XXA6 986 aa17.77■□□□□ 0.44
C9orf3-217ENST00000479161 PCNX4Q63HM2 1172 aa17.77■□□□□ 0.44
C9orf3-217ENST00000479161 TYW1BQ6NUM6 668 aa17.77■□□□□ 0.44
C9orf3-217ENST00000479161 USP17L6PQ6QN14 398 aa17.77■□□□□ 0.44
C9orf3-217ENST00000479161 EEPD1Q7L9B9 569 aa17.77■□□□□ 0.44
C9orf3-217ENST00000479161 TLK2Q86UE8 772 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms