RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 FCHSD1Q86WN1 690 aa23.58■■□□□ 1.37
VARS-224ENST00000479051 GPKOWQ92917 476 aaPredicted RBP eCLIP23.58■■□□□ 1.37
VARS-224ENST00000479051 RNF26Q9BY78 433 aaPredicted RBP23.58■■□□□ 1.37
VARS-224ENST00000479051 KATNBL1Q9H079 304 aa23.58■■□□□ 1.37
VARS-224ENST00000479051 SPC25Q9HBM1 224 aa23.58■■□□□ 1.37
VARS-224ENST00000479051 PXMP2Q9NR77 195 aa23.58■■□□□ 1.37
VARS-224ENST00000479051 FRMPD3Q5JV73 1810 aa23.57■■□□□ 1.36
VARS-224ENST00000479051 PIK3CDO00329 1044 aa23.57■■□□□ 1.36
VARS-224ENST00000479051 DUSP11O75319 330 aaKnown RBP23.57■■□□□ 1.36
VARS-224ENST00000479051 CDKL5O76039 1030 aa23.57■■□□□ 1.36
VARS-224ENST00000479051 SCG2P13521 617 aa23.57■■□□□ 1.36
VARS-224ENST00000479051 EIF2AK2P19525 551 aaKnown RBP23.57■■□□□ 1.36
VARS-224ENST00000479051 TNFAIP2Q03169 654 aa23.57■■□□□ 1.36
VARS-224ENST00000479051 STXBP2Q15833 593 aa23.57■■□□□ 1.36
VARS-224ENST00000479051 PFKFB3Q16875 520 aaPredicted RBP23.57■■□□□ 1.36
VARS-224ENST00000479051 IQSEC1Q6DN90 963 aa23.57■■□□□ 1.36
VARS-224ENST00000479051 TEX2Q8IWB9 1127 aa23.57■■□□□ 1.36
VARS-224ENST00000479051 CCDC12Q8WUD4 166 aaPredicted RBP23.57■■□□□ 1.36
VARS-224ENST00000479051 SLC26A6Q9BXS9 759 aa23.57■■□□□ 1.36
VARS-224ENST00000479051 GLT8D2Q9H1C3 349 aa23.57■■□□□ 1.36
VARS-224ENST00000479051 KBTBD13C9JR72 458 aa23.56■■□□□ 1.36
VARS-224ENST00000479051 DNM1LO00429 736 aa23.56■■□□□ 1.36
VARS-224ENST00000479051 MYCNP04198 464 aaPredicted RBP23.56■■□□□ 1.36
VARS-224ENST00000479051 SSRP1Q08945 709 aaKnown RBP23.56■■□□□ 1.36
VARS-224ENST00000479051 NTRK3Q16288 839 aa23.56■■□□□ 1.36
VARS-224ENST00000479051 RNF180Q86T96 592 aa23.56■■□□□ 1.36
VARS-224ENST00000479051 PHKBQ93100 1093 aa23.56■■□□□ 1.36
VARS-224ENST00000479051 BARHL2Q9NY43 387 aa23.56■■□□□ 1.36
VARS-224ENST00000479051 TPCN1Q9ULQ1 816 aa23.56■■□□□ 1.36
VARS-224ENST00000479051 DDX49Q9Y6V7 483 aaKnown RBP23.56■■□□□ 1.36
VARS-224ENST00000479051 LRRC37A2A6NM11 1700 aa23.56■■□□□ 1.36
VARS-224ENST00000479051 STXBP3O00186 592 aa23.55■■□□□ 1.36
VARS-224ENST00000479051 PFKFB2O60825 505 aa23.55■■□□□ 1.36
VARS-224ENST00000479051 NR3C2P08235 984 aa23.55■■□□□ 1.36
VARS-224ENST00000479051 UBE2Q1Q7Z7E8 422 aa23.55■■□□□ 1.36
VARS-224ENST00000479051 PAWRQ96IZ0 340 aaKnown RBP23.55■■□□□ 1.36
VARS-224ENST00000479051 PDCD2LQ9BRP1 358 aa23.55■■□□□ 1.36
VARS-224ENST00000479051 HTATIP2Q9BUP3 242 aa23.55■■□□□ 1.36
VARS-224ENST00000479051 C11orf49Q9H6J7 331 aa23.55■■□□□ 1.36
VARS-224ENST00000479051 MEIS2O14770 477 aa23.54■■□□□ 1.36
VARS-224ENST00000479051 ADCYAP1R1P41586 468 aa23.54■■□□□ 1.36
VARS-224ENST00000479051 ADCY7P51828 1080 aa23.54■■□□□ 1.36
VARS-224ENST00000479051 TAPT1Q6NXT6 567 aa23.54■■□□□ 1.36
VARS-224ENST00000479051 USP17L6PQ6QN14 398 aa23.54■■□□□ 1.36
VARS-224ENST00000479051 IL27Q8NEV9 243 aa23.54■■□□□ 1.36
VARS-224ENST00000479051 SCFD2Q8WU76 684 aa23.54■■□□□ 1.36
VARS-224ENST00000479051 EHMT1Q9H9B1 1298 aa23.54■■□□□ 1.36
VARS-224ENST00000479051 SPDYE3A6NKU9 549 aa23.53■■□□□ 1.36
VARS-224ENST00000479051 EIF3JO75822 258 aaKnown RBP23.53■■□□□ 1.36
VARS-224ENST00000479051 MYCLP12524 364 aaPredicted RBP23.53■■□□□ 1.36
VARS-224ENST00000479051 CCND2P30279 289 aa23.53■■□□□ 1.36
VARS-224ENST00000479051 SCRN1Q12765 414 aa23.53■■□□□ 1.36
VARS-224ENST00000479051 RABEP1Q15276 862 aa23.53■■□□□ 1.36
VARS-224ENST00000479051 LRRC41Q15345 812 aa23.53■■□□□ 1.36
VARS-224ENST00000479051 DIS3LQ8TF46 1054 aaKnown RBP23.53■■□□□ 1.36
VARS-224ENST00000479051 LENG1Q96BZ8 264 aaPredicted RBP23.53■■□□□ 1.36
VARS-224ENST00000479051 WDR11Q9BZH6 1224 aa23.53■■□□□ 1.36
VARS-224ENST00000479051 AP5M1Q9H0R1 490 aa23.53■■□□□ 1.36
VARS-224ENST00000479051 PDGFCQ9NRA1 345 aa23.53■■□□□ 1.36
VARS-224ENST00000479051 SMCO2A6NFE2 343 aa23.52■■□□□ 1.36
VARS-224ENST00000479051 PGK1P00558 417 aa23.52■■□□□ 1.36
VARS-224ENST00000479051 TTLL4Q14679 1199 aa23.52■■□□□ 1.36
VARS-224ENST00000479051 PGM5Q15124 567 aa23.52■■□□□ 1.36
VARS-224ENST00000479051 GJC2Q5T442 439 aaPredicted RBP23.52■■□□□ 1.36
VARS-224ENST00000479051 CCDC148Q8NFR7 591 aa23.52■■□□□ 1.36
VARS-224ENST00000479051 RIC8AQ9NPQ8 531 aa23.52■■□□□ 1.36
VARS-224ENST00000479051 Q9Y3F1 56 aa23.52■■□□□ 1.36
VARS-224ENST00000479051 SYNRGQ9UMZ2 1314 aa23.52■■□□□ 1.36
VARS-224ENST00000479051 BRCA2P51587 3418 aa23.52■■□□□ 1.36
VARS-224ENST00000479051 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.51■■□□□ 1.35
VARS-224ENST00000479051 RBM47A0AV96 593 aaKnown RBP23.51■■□□□ 1.35
VARS-224ENST00000479051 NKRFO15226 690 aaKnown RBP eCLIP23.51■■□□□ 1.35
VARS-224ENST00000479051 DEXIO95424 95 aa23.51■■□□□ 1.35
VARS-224ENST00000479051 SMPD1P17405 629 aa23.51■■□□□ 1.35
VARS-224ENST00000479051 MNX1P50219 401 aaPredicted RBP23.51■■□□□ 1.35
VARS-224ENST00000479051 PKN1Q16512 942 aa23.51■■□□□ 1.35
VARS-224ENST00000479051 DUSP28Q4G0W2 176 aa23.51■■□□□ 1.35
VARS-224ENST00000479051 SEPT14Q6ZU15 432 aa23.51■■□□□ 1.35
VARS-224ENST00000479051 TLK2Q86UE8 772 aa23.51■■□□□ 1.35
VARS-224ENST00000479051 C6orf50Q9HD87 102 aa23.51■■□□□ 1.35
VARS-224ENST00000479051 ESYT2A0FGR8 921 aa23.5■■□□□ 1.35
VARS-224ENST00000479051 PPFIA3O75145 1194 aa23.5■■□□□ 1.35
VARS-224ENST00000479051 ADAMTS4O75173 837 aa23.5■■□□□ 1.35
VARS-224ENST00000479051 STAM2O75886 525 aa23.5■■□□□ 1.35
VARS-224ENST00000479051 FOSP01100 380 aaPredicted RBP23.5■■□□□ 1.35
VARS-224ENST00000479051 C6orf222P0C671 652 aaPredicted RBP23.5■■□□□ 1.35
VARS-224ENST00000479051 GJA9P57773 515 aa23.5■■□□□ 1.35
VARS-224ENST00000479051 UBE2SQ16763 222 aa23.5■■□□□ 1.35
VARS-224ENST00000479051 TYW1BQ6NUM6 668 aa23.5■■□□□ 1.35
VARS-224ENST00000479051 XRRA1Q6P2D8 792 aa23.5■■□□□ 1.35
VARS-224ENST00000479051 VSIG10LQ86VR7 867 aa23.5■■□□□ 1.35
VARS-224ENST00000479051 PCSK9Q8NBP7 692 aaKnown RBP23.5■■□□□ 1.35
VARS-224ENST00000479051 KIF2CQ99661 725 aa23.5■■□□□ 1.35
VARS-224ENST00000479051 TSEN34Q9BSV6 310 aaKnown RBP23.5■■□□□ 1.35
VARS-224ENST00000479051 BACH2Q9BYV9 841 aa23.5■■□□□ 1.35
VARS-224ENST00000479051 UPF3AQ9H1J1 476 aaKnown RBP23.5■■□□□ 1.35
VARS-224ENST00000479051 LIMCH1Q9UPQ0 1083 aa23.5■■□□□ 1.35
VARS-224ENST00000479051 GNEQ9Y223 722 aaKnown RBP23.5■■□□□ 1.35
VARS-224ENST00000479051 FRMPD4Q14CM0 1322 aa23.5■■□□□ 1.35
VARS-224ENST00000479051 ADCY6O43306 1168 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms