RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 FAM207AQ9NSI2 230 aaPredicted RBP12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 CAPN11Q9UMQ6 739 aa12.24□□□□□ -0.45
LRRFIP1-211ENST00000478958 FCER1AP12319 257 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 KLRK1P26718 216 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 CYLC1P35663 651 aaPredicted RBP12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 SMTNP53814 917 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 E2F5Q15329 346 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 CCDC40Q4G0X9 1142 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 SND1Q7KZF4 910 aaKnown RBP eCLIP12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 ZNF507Q8TCN5 953 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 LRRC15Q8TF66 581 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 RRP36Q96EU6 259 aaKnown RBP12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 MTA3Q9BTC8 594 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 KDM4CQ9H3R0 1056 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 MLXIPQ9HAP2 919 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 ATP6V0A4Q9HBG4 840 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 HOMER3Q9NSC5 361 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 EXOC1Q9NV70 894 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 G3BP2Q9UN86 482 aaKnown RBP12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 ADAMTSL3P82987 1691 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 MEFVO15553 781 aaPredicted RBP12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 ZPR1O75312 459 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 FAM163BP0C2L3 166 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 LONP1P36776 959 aaKnown RBP12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 IL6STP40189 918 aaPredicted RBP12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 PDE4DQ08499 809 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 KIF5AQ12840 1032 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 PFKFB3Q16875 520 aaPredicted RBP12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 TLDC1Q6P9B6 456 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 CCDC42Q96M95 316 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 SCLT1Q96NL6 688 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 NOC4LQ9BVI4 516 aaKnown RBP12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 TFCP2L1Q9NZI6 479 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 MYH2Q9UKX2 1941 aa12.23□□□□□ -0.45
LRRFIP1-211ENST00000478958 GOLGA6BA6NDN3 693 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 ERVV-1B6SEH8 477 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 PPP1R12BO60237 982 aaPredicted RBP12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 DDAH1O94760 285 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 TUBBP07437 444 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 GOLGA8HP0CJ92 632 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 ASIC1P78348 528 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 STK4Q13043 487 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 CCDC24Q8N4L8 307 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 CCDC97Q96F63 343 aaPredicted RBP12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 CNOT6LQ96LI5 555 aaKnown RBP12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 CAPS2Q9BXY5 557 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 DMGDHQ9UI17 866 aaKnown RBP12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 ATXN2Q99700 1313 aaKnown RBP12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 GOLGA6CA6NDK9 693 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 GOLGA6DP0CG33 693 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 PRDX5P30044 214 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 DNM2P50570 870 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 SPA17Q15506 151 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 CAVIN4Q5BKX8 364 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 CCDC181Q5TID7 509 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 PAPD7Q5XG87 772 aaKnown RBP12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 ANKRD40Q6AI12 368 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 DNAJC14Q6Y2X3 702 aaPredicted RBP12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 C3orf67Q6ZVT6 689 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 SMIM5Q71RC9 77 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 C2CD5Q86YS7 1000 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 LRRC1Q9BTT6 524 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 GOPCQ9HD26 462 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 BATF3Q9NR55 127 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 MCM9Q9NXL9 1143 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 GOLGA6AQ9NYA3 693 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 CAPN6Q9Y6Q1 641 aa12.22□□□□□ -0.45
LRRFIP1-211ENST00000478958 RASSF10A6NK89 507 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 MOCS3O95396 460 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 USP17L8P0C7I0 530 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 PDHBP11177 359 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 EEF1GP26641 437 aaKnown RBP12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 MAGEA8P43361 318 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 AARSP49588 968 aaKnown RBP eCLIP12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 CKAP4Q07065 602 aaKnown RBP12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 PDS5AQ29RF7 1337 aaKnown RBP12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 HHATQ5VTY9 493 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 TTI2Q6NXR4 508 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 CCNI2Q6ZMN8 369 aaPredicted RBP12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 CCDC50Q8IVM0 306 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 C4orf32Q8N8J7 132 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 DYNLL2Q96FJ2 89 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 DCP1AQ9NPI6 582 aaPredicted RBP12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 STX8Q9UNK0 236 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 AGPSO00116 658 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 ZNF263O14978 683 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 EIF3HO15372 352 aaKnown RBP eCLIP12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 NCK2O43639 380 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 KLRC4O43908 158 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 PLCG1P19174 1290 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 TRAPPC10P48553 1259 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 GNGT1P63211 74 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 TFAP4Q01664 338 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 PPFIA1Q13136 1202 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 LETM2Q2VYF4 491 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 RNF187Q5TA31 235 aaPredicted RBP12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 THEMIS2Q5TEJ8 643 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 NFRKBQ6P4R8 1299 aa12.21□□□□□ -0.45
LRRFIP1-211ENST00000478958 SPATS2Q86XZ4 545 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms