RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 CPZQ66K79 652 aa5.87□□□□□ -1.47
HPS3-205ENST00000478525 USP33Q8TEY7 942 aa5.87□□□□□ -1.47
HPS3-205ENST00000478525 LOXL4Q96JB6 756 aa5.87□□□□□ -1.47
HPS3-205ENST00000478525 NPHP3-ACAD11A0A0J9YXS1 232 aa5.86□□□□□ -1.47
HPS3-205ENST00000478525 PLATP00750 562 aa5.86□□□□□ -1.47
HPS3-205ENST00000478525 NTRK1P04629 796 aa5.86□□□□□ -1.47
HPS3-205ENST00000478525 PAMP19021 973 aa5.86□□□□□ -1.47
HPS3-205ENST00000478525 GRB10Q13322 594 aa5.86□□□□□ -1.47
HPS3-205ENST00000478525 RGL3Q3MIN7 710 aa5.86□□□□□ -1.47
HPS3-205ENST00000478525 ADAT2Q7Z6V5 191 aaKnown RBP5.86□□□□□ -1.47
HPS3-205ENST00000478525 ARHGEF39Q8N4T4 335 aa5.86□□□□□ -1.47
HPS3-205ENST00000478525 TTC9BQ8N6N2 239 aa5.86□□□□□ -1.47
HPS3-205ENST00000478525 KLHL6Q8WZ60 621 aa5.86□□□□□ -1.47
HPS3-205ENST00000478525 SAMD11Q96NU1 681 aa5.86□□□□□ -1.47
HPS3-205ENST00000478525 C1QTNF3Q9BXJ4 246 aa5.86□□□□□ -1.47
HPS3-205ENST00000478525 PHAXQ9H814 394 aaKnown RBP5.86□□□□□ -1.47
HPS3-205ENST00000478525 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.86□□□□□ -1.47
HPS3-205ENST00000478525 C7orf72A4D263 438 aa5.85□□□□□ -1.47
HPS3-205ENST00000478525 C1QTNF3-AMACRE9PGA6 284 aa5.85□□□□□ -1.47
HPS3-205ENST00000478525 PPM1BO75688 479 aa5.85□□□□□ -1.47
HPS3-205ENST00000478525 FUCA1P04066 466 aa5.85□□□□□ -1.47
HPS3-205ENST00000478525 RPL13P26373 211 aaKnown RBP5.85□□□□□ -1.47
HPS3-205ENST00000478525 RACK1P63244 317 aaKnown RBP5.85□□□□□ -1.47
HPS3-205ENST00000478525 SLC7A5Q01650 507 aa5.85□□□□□ -1.47
HPS3-205ENST00000478525 MBLAC2Q68D91 279 aa5.85□□□□□ -1.47
HPS3-205ENST00000478525 C11orf84Q9BUA3 381 aaPredicted RBP5.85□□□□□ -1.47
HPS3-205ENST00000478525 BACH2Q9BYV9 841 aa5.85□□□□□ -1.47
HPS3-205ENST00000478525 GINM1Q9NU53 330 aa5.85□□□□□ -1.47
HPS3-205ENST00000478525 SLC12A7Q9Y666 1083 aa5.85□□□□□ -1.47
HPS3-205ENST00000478525 TRBV23OR9-2A0A075B6M9 112 aa5.84□□□□□ -1.47
HPS3-205ENST00000478525 A0A1W2PQH9 124 aa5.84□□□□□ -1.47
HPS3-205ENST00000478525 NPHS1O60500 1241 aa5.84□□□□□ -1.47
HPS3-205ENST00000478525 ETV3LQ6ZN32 361 aa5.84□□□□□ -1.47
HPS3-205ENST00000478525 DCP2Q8IU60 420 aaKnown RBP5.84□□□□□ -1.47
HPS3-205ENST00000478525 FAM26EQ8N5C1 309 aa5.84□□□□□ -1.47
HPS3-205ENST00000478525 PLEKHO2Q8TD55 490 aa5.84□□□□□ -1.47
HPS3-205ENST00000478525 SSBP3Q9BWW4 388 aaPredicted RBP5.84□□□□□ -1.47
HPS3-205ENST00000478525 METTL5Q9NRN9 209 aaKnown RBP5.84□□□□□ -1.47
HPS3-205ENST00000478525 CLEC1BQ9P126 229 aa5.84□□□□□ -1.47
HPS3-205ENST00000478525 INVSQ9Y283 1065 aa5.84□□□□□ -1.47
HPS3-205ENST00000478525 ZNF16P17020 682 aaPredicted RBP5.83□□□□□ -1.48
HPS3-205ENST00000478525 FAM26FQ5R3K3 315 aa5.83□□□□□ -1.48
HPS3-205ENST00000478525 C9orf131Q5VYM1 1079 aa5.83□□□□□ -1.48
HPS3-205ENST00000478525 MIB1Q86YT6 1006 aa5.83□□□□□ -1.48
HPS3-205ENST00000478525 ZNF513Q8N8E2 541 aaPredicted RBP5.83□□□□□ -1.48
HPS3-205ENST00000478525 C19orf47Q8N9M1 422 aaKnown RBP5.83□□□□□ -1.48
HPS3-205ENST00000478525 KYQ8NBH2 561 aa5.83□□□□□ -1.48
HPS3-205ENST00000478525 RCC1LQ96I51 464 aaKnown RBP5.83□□□□□ -1.48
HPS3-205ENST00000478525 CRBNQ96SW2 442 aa5.83□□□□□ -1.48
HPS3-205ENST00000478525 MARCH2Q9P0N8 246 aa5.83□□□□□ -1.48
HPS3-205ENST00000478525 APEX2Q9UBZ4 518 aa5.83□□□□□ -1.48
HPS3-205ENST00000478525 DDX41Q9UJV9 622 aaKnown RBP5.83□□□□□ -1.48
HPS3-205ENST00000478525 SUGT1Q9Y2Z0 365 aa5.83□□□□□ -1.48
HPS3-205ENST00000478525 SGSM2O43147 1006 aa5.82□□□□□ -1.48
HPS3-205ENST00000478525 PLS3P13797 630 aa5.82□□□□□ -1.48
HPS3-205ENST00000478525 GIPRP48546 466 aa5.82□□□□□ -1.48
HPS3-205ENST00000478525 ITGA1P56199 1179 aa5.82□□□□□ -1.48
HPS3-205ENST00000478525 EIF6P56537 245 aaKnown RBP5.82□□□□□ -1.48
HPS3-205ENST00000478525 PAK2Q13177 524 aa5.82□□□□□ -1.48
HPS3-205ENST00000478525 COL9A2Q14055 689 aaPredicted RBP5.82□□□□□ -1.48
HPS3-205ENST00000478525 MCTP2Q6DN12 878 aa5.82□□□□□ -1.48
HPS3-205ENST00000478525 STK32CQ86UX6 486 aa5.82□□□□□ -1.48
HPS3-205ENST00000478525 LGI4Q8N135 537 aa5.82□□□□□ -1.48
HPS3-205ENST00000478525 SLC16A11Q8NCK7 471 aa5.82□□□□□ -1.48
HPS3-205ENST00000478525 DPF3Q92784 378 aa5.82□□□□□ -1.48
HPS3-205ENST00000478525 EFR3BQ9Y2G0 817 aa5.82□□□□□ -1.48
HPS3-205ENST00000478525 MROH6A6NGR9 719 aa5.81□□□□□ -1.48
HPS3-205ENST00000478525 SOX9P48436 509 aa5.81□□□□□ -1.48
HPS3-205ENST00000478525 KIAA2012Q0VF49 1180 aa5.81□□□□□ -1.48
HPS3-205ENST00000478525 SCRN1Q12765 414 aa5.81□□□□□ -1.48
HPS3-205ENST00000478525 PRR31Q5SQ13 230 aa5.81□□□□□ -1.48
HPS3-205ENST00000478525 BORAQ6PGQ7 559 aa5.81□□□□□ -1.48
HPS3-205ENST00000478525 CD300LDQ6UXZ3 194 aa5.81□□□□□ -1.48
HPS3-205ENST00000478525 TEX2Q8IWB9 1127 aa5.81□□□□□ -1.48
HPS3-205ENST00000478525 TXNDC5Q8NBS9 432 aaKnown RBP5.81□□□□□ -1.48
HPS3-205ENST00000478525 COPS5Q92905 334 aa5.81□□□□□ -1.48
HPS3-205ENST00000478525 AP5M1Q9H0R1 490 aa5.81□□□□□ -1.48
HPS3-205ENST00000478525 PCDH18Q9HCL0 1135 aa5.81□□□□□ -1.48
HPS3-205ENST00000478525 SRRDQ9UH36 339 aa5.81□□□□□ -1.48
HPS3-205ENST00000478525 ST6GALNAC2Q9UJ37 374 aa5.81□□□□□ -1.48
HPS3-205ENST00000478525 FSHBP01225 129 aa5.8□□□□□ -1.48
HPS3-205ENST00000478525 THBDP07204 575 aa5.8□□□□□ -1.48
HPS3-205ENST00000478525 LIMS2Q7Z4I7 341 aa5.8□□□□□ -1.48
HPS3-205ENST00000478525 TTLL6Q8N841 843 aa5.8□□□□□ -1.48
HPS3-205ENST00000478525 DVL3Q92997 716 aaPredicted RBP5.8□□□□□ -1.48
HPS3-205ENST00000478525 MMP19Q99542 508 aa5.8□□□□□ -1.48
HPS3-205ENST00000478525 GPRC5CQ9NQ84 441 aa5.8□□□□□ -1.48
HPS3-205ENST00000478525 BTG4Q9NY30 223 aa5.8□□□□□ -1.48
HPS3-205ENST00000478525 AKT3Q9Y243 479 aa5.8□□□□□ -1.48
HPS3-205ENST00000478525 ZNF536O15090 1300 aa5.79□□□□□ -1.48
HPS3-205ENST00000478525 DDX3XO00571 662 aaKnown RBP eCLIP5.79□□□□□ -1.48
HPS3-205ENST00000478525 SUV39H1O43463 412 aa5.79□□□□□ -1.48
HPS3-205ENST00000478525 KCNH1O95259 989 aa5.79□□□□□ -1.48
HPS3-205ENST00000478525 FPR2P25090 351 aa5.79□□□□□ -1.48
HPS3-205ENST00000478525 STAT5AP42229 794 aa5.79□□□□□ -1.48
HPS3-205ENST00000478525 RBM10P98175 930 aaKnown RBP5.79□□□□□ -1.48
HPS3-205ENST00000478525 INF2Q27J81 1249 aa5.79□□□□□ -1.48
HPS3-205ENST00000478525 KIAA1211LQ6NV74 962 aa5.79□□□□□ -1.48
HPS3-205ENST00000478525 FAM124AQ86V42 546 aa5.79□□□□□ -1.48
HPS3-205ENST00000478525 ZC3H18Q86VM9 953 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms