RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 SUPT20HL1Q3ZLR7 823 aa15.64■□□□□ 0.09
NPHP4-208ENST00000478423 FAM76AQ8TAV0 307 aa15.64■□□□□ 0.09
NPHP4-208ENST00000478423 PNPLA7Q6ZV29 1317 aa15.64■□□□□ 0.09
NPHP4-208ENST00000478423 ASNSP08243 561 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 RCAN1P53805 252 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 SNAP25P60880 206 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 ITPK1Q13572 414 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 PTPROQ16827 1216 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 H2AFZP0C0S5 128 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 POLGP54098 1239 aaPredicted RBP15.63■□□□□ 0.09
NPHP4-208ENST00000478423 DMP1Q13316 513 aaPredicted RBP15.63■□□□□ 0.09
NPHP4-208ENST00000478423 VPS72Q15906 364 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 TBC1D10BQ4KMP7 808 aaPredicted RBP15.63■□□□□ 0.09
NPHP4-208ENST00000478423 H2AFVQ71UI9 128 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 KIAA1524Q8TCG1 905 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 GDAP1L1Q96MZ0 367 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 ANO3Q9BYT9 981 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 ALDH8A1Q9H2A2 487 aaPredicted RBP15.63■□□□□ 0.09
NPHP4-208ENST00000478423 PLEKHA4Q9H4M7 779 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 DISC1Q9NRI5 854 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 UTP11Q9Y3A2 253 aaKnown RBP15.63■□□□□ 0.09
NPHP4-208ENST00000478423 BUB1O43683 1085 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 CCNE1P24864 410 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 ZBTB8OSQ8IWT0 167 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 NSUN4Q96CB9 384 aaKnown RBP15.63■□□□□ 0.09
NPHP4-208ENST00000478423 RIC8AQ9NPQ8 531 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 ASIC3Q9UHC3 531 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 CD163L1Q9NR16 1453 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 FRMPD1Q5SYB0 1578 aa15.63■□□□□ 0.09
NPHP4-208ENST00000478423 CDC25BP30305 580 aa15.62■□□□□ 0.09
NPHP4-208ENST00000478423 USP14P54578 494 aa15.62■□□□□ 0.09
NPHP4-208ENST00000478423 SEPT2Q15019 361 aa15.62■□□□□ 0.09
NPHP4-208ENST00000478423 RESP18Q5W5W9 173 aa15.62■□□□□ 0.09
NPHP4-208ENST00000478423 HNRNPDLO14979 420 aaKnown RBP15.62■□□□□ 0.09
NPHP4-208ENST00000478423 IVLP07476 585 aa15.62■□□□□ 0.09
NPHP4-208ENST00000478423 MAPK8IP2Q13387 824 aaPredicted RBP15.62■□□□□ 0.09
NPHP4-208ENST00000478423 NBPF11Q86T75 865 aa15.62■□□□□ 0.09
NPHP4-208ENST00000478423 KCNK9Q9NPC2 374 aa15.62■□□□□ 0.09
NPHP4-208ENST00000478423 PLEKHG2Q9H7P9 1386 aa15.62■□□□□ 0.09
NPHP4-208ENST00000478423 CASP1P29466 404 aa15.62■□□□□ 0.09
NPHP4-208ENST00000478423 SND1Q7KZF4 910 aaKnown RBP eCLIP15.62■□□□□ 0.09
NPHP4-208ENST00000478423 CPLX4Q7Z7G2 160 aa15.62■□□□□ 0.09
NPHP4-208ENST00000478423 POMGNT1Q8WZA1 660 aa15.62■□□□□ 0.09
NPHP4-208ENST00000478423 ATP6V0A1Q93050 837 aa15.62■□□□□ 0.09
NPHP4-208ENST00000478423 NACC1Q96RE7 527 aa15.62■□□□□ 0.09
NPHP4-208ENST00000478423 NSRP1Q9H0G5 558 aaKnown RBP15.62■□□□□ 0.09
NPHP4-208ENST00000478423 NKX1-1Q15270 411 aaPredicted RBP15.62■□□□□ 0.09
NPHP4-208ENST00000478423 SH3GLB2Q9NR46 395 aa15.62■□□□□ 0.09
NPHP4-208ENST00000478423 AMFRQ9UKV5 643 aa15.62■□□□□ 0.09
NPHP4-208ENST00000478423 EBAG9O00559 213 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 HPDP32754 393 aaPredicted RBP15.61■□□□□ 0.09
NPHP4-208ENST00000478423 RBL2Q08999 1139 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 TAF6LQ9Y6J9 622 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 PREX1Q8TCU6 1659 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 ECE2O60344 883 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 KCTD2Q14681 263 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 MAN2A1Q16706 1144 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 AOC3Q16853 763 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 RC3H1Q5TC82 1133 aaKnown RBP15.61■□□□□ 0.09
NPHP4-208ENST00000478423 FMR1NBQ8N0W7 255 aaPredicted RBP15.61■□□□□ 0.09
NPHP4-208ENST00000478423 KAZALD1Q96I82 304 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 RPGRIP1Q96KN7 1286 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 ST7Q9NRC1 585 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 C1orf112Q9NSG2 853 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 USP17L15C9J2P7 530 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 USP17L13C9JLJ4 530 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 USP17L11C9JVI0 530 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 USP17L18D6R9N7 530 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 USP17L22D6RA61 530 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 USP17L17D6RBQ6 530 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 USP17L19D6RCP7 530 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 USP17L20D6RJB6 530 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 H0YCG3 227 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 KCNK3O14649 394 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 PLA2G4BP0C869 781 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 USP17L24Q0WX57 530 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 USP17L6PQ6QN14 398 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 CCDC105Q8IYK2 499 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 LRRC45Q96CN5 670 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 ZNF341Q9BYN7 854 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 TXNDC16Q9P2K2 825 aa15.61■□□□□ 0.09
NPHP4-208ENST00000478423 ZBTB5O15062 677 aa15.6■□□□□ 0.09
NPHP4-208ENST00000478423 N4BP1O75113 896 aaKnown RBP15.6■□□□□ 0.09
NPHP4-208ENST00000478423 ATP2A2P16615 1042 aaKnown RBP15.6■□□□□ 0.09
NPHP4-208ENST00000478423 WHAMMP3Q1A5X7 153 aa15.6■□□□□ 0.09
NPHP4-208ENST00000478423 CLEC17AQ6ZS10 378 aa15.6■□□□□ 0.09
NPHP4-208ENST00000478423 GPR161Q8N6U8 529 aaKnown RBP15.6■□□□□ 0.09
NPHP4-208ENST00000478423 PSMD1Q99460 953 aa15.6■□□□□ 0.09
NPHP4-208ENST00000478423 EMILIN3Q9NT22 766 aa15.6■□□□□ 0.09
NPHP4-208ENST00000478423 PIM2Q9P1W9 311 aa15.6■□□□□ 0.09
NPHP4-208ENST00000478423 RWDD2AQ9UIY3 292 aa15.6■□□□□ 0.09
NPHP4-208ENST00000478423 GDAQ9Y2T3 454 aa15.6■□□□□ 0.09
NPHP4-208ENST00000478423 PXDNLA1KZ92 1463 aa15.6■□□□□ 0.09
NPHP4-208ENST00000478423 CLIC2O15247 247 aa15.6■□□□□ 0.09
NPHP4-208ENST00000478423 PRPF6O94906 941 aaKnown RBP15.6■□□□□ 0.09
NPHP4-208ENST00000478423 EIF2AK2P19525 551 aaKnown RBP15.6■□□□□ 0.09
NPHP4-208ENST00000478423 PAK2Q13177 524 aa15.6■□□□□ 0.09
NPHP4-208ENST00000478423 KMT5BQ4FZB7 885 aa15.6■□□□□ 0.09
NPHP4-208ENST00000478423 PRR5LQ6MZQ0 368 aa15.6■□□□□ 0.09
NPHP4-208ENST00000478423 FAM160B2Q86V87 743 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms