RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 CASP2P42575 452 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 PCBP3P57721 371 aaKnown RBP4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 AMPD3Q01432 767 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 RAPGEF1Q13905 1077 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 SIM2Q14190 667 aaPredicted RBP4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 FXNQ16595 210 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 ALDH1L2Q3SY69 923 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 CCDC92Q53HC0 331 aaPredicted RBP4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 NOL9Q5SY16 702 aaKnown RBP4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 HEATR6Q6AI08 1181 aaKnown RBP4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 KIAA1211LQ6NV74 962 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 PDXDC1Q6P996 788 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 RNF111Q6ZNA4 994 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 KLHL6Q8WZ60 621 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 TCTN2Q96GX1 697 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 ALPK1Q96QP1 1244 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 DSCC1Q9BVC3 393 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 GBP3Q9H0R5 595 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 OSBPL2Q9H1P3 480 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 ALDH8A1Q9H2A2 487 aaPredicted RBP4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 CXorf56Q9H5V9 222 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 ZSWIM4Q9H7M6 989 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 GP6Q9HCN6 339 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 PRDM7Q9NQW5 492 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 MBNL3Q9NUK0 354 aaKnown RBP4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 PGAP2Q9UHJ9 254 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 ADGRE2Q9UHX3 823 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 ADAMTS6Q9UKP5 1117 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 ASAP1Q9ULH1 1129 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 ZNF451Q9Y4E5 1061 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 FHOD1Q9Y613 1164 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 MRC2Q9UBG0 1479 aa4.23□□□□□ -1.73
FNDC3B-209ENST00000478016 A0A087WZG4 1122 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 SSU72P8A0A1W2PR75 194 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 CHL1O00533 1208 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 PPM1BO75688 479 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 EPHX1P07099 455 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 RNASE1P07998 156 aaKnown RBP4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 NAT2P11245 290 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 PSMA3P25788 255 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 IRAK1P51617 712 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 ZNF445P59923 1031 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 IFT88Q13099 833 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 PLEKHG4Q58EX7 1191 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 XP32Q5T750 250 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 CC2D1AQ6P1N0 951 aaPredicted RBP4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 C6orf15Q6UXA7 325 aaPredicted RBP4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 CCDC73Q6ZRK6 1079 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 ANKS3Q6ZW76 656 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 CBLL1Q75N03 491 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 CKAP2LQ8IYA6 745 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 CHPFQ8IZ52 775 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 KIAA1958Q8N8K9 716 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 LINC00116Q8NCU8 138 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 NGDNQ8NEJ9 315 aaKnown RBP4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 SYTL4Q96C24 671 aaPredicted RBP4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 PAIP2Q9BPZ3 127 aaKnown RBP4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 LRRC27Q9C0I9 530 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 KLHL25Q9H0H3 589 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 RC3H2Q9HBD1 1191 aaKnown RBP4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 SLAMF8Q9P0V8 285 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 WHRNQ9P202 907 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 TCFL5Q9UL49 500 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 THRAP3Q9Y2W1 955 aaKnown RBP4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 SLC45A1Q9Y2W3 748 aa4.22□□□□□ -1.73
FNDC3B-209ENST00000478016 PDS5BQ9NTI5 1447 aa4.21□□□□□ -1.73
FNDC3B-209ENST00000478016 ANKRD34BA5PLL1 514 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 MEIS1O00470 390 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 IPO8O15397 1037 aaKnown RBP4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 KLF4O43474 513 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 DDAH1O94760 285 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 GSNP06396 782 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 HNRNPCP07910 306 aaKnown RBP eCLIP4.21□□□□□ -1.746e-7■■□□□ 11.7
FNDC3B-209ENST00000478016 SYPP08247 313 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 RPL17P18621 184 aaKnown RBP4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 ENDOUP21128 410 aaKnown RBP4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 CASQ1P31415 396 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 BMP8BP34820 402 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 GTF2F1P35269 517 aaKnown RBP eCLIP4.21□□□□□ -1.745e-7■■■■■ 31.1
FNDC3B-209ENST00000478016 TRPC1P48995 793 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 ZNF132P52740 706 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 ZNF143P52747 638 aaPredicted RBP4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 TEKQ02763 1124 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 HLTFQ14527 1009 aaKnown RBP eCLIP4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 CWF19L1Q69YN2 538 aaKnown RBP4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 CRTC3Q6UUV7 619 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 ADAT2Q7Z6V5 191 aaKnown RBP4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 FAM178BQ8IXR5 827 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 FIBCD1Q8N539 461 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 USHBP1Q8N6Y0 703 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 TEX19Q8NA77 164 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 LRRN4CLQ8ND94 238 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 HNRNPLLQ8WVV9 542 aaKnown RBP4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 BRF1Q92994 677 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 CCDC47Q96A33 483 aaKnown RBP4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 ERP27Q96DN0 273 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 SERINC2Q96SA4 455 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 TRIM55Q9BYV6 548 aa4.21□□□□□ -1.74
FNDC3B-209ENST00000478016 FOXP3Q9BZS1 431 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms