RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 DLK2Q6UY11 383 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 PNMA8AQ86V59 439 aaPredicted RBP6.09□□□□□ -1.43
CKS1B-207ENST00000477676 SMYD4Q8IYR2 804 aaPredicted RBP6.09□□□□□ -1.43
CKS1B-207ENST00000477676 NGEFQ8N5V2 710 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 CAPNS2Q96L46 248 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 THUMPD2Q9BTF0 503 aaKnown RBP6.09□□□□□ -1.43
CKS1B-207ENST00000477676 DUSP23Q9BVJ7 150 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 DNAJC25Q9H1X3 360 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 TNKS2Q9H2K2 1166 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 ATXN3LQ9H3M9 355 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 ZNF652Q9Y2D9 606 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 SNX11Q9Y5W9 270 aa6.09□□□□□ -1.43
CKS1B-207ENST00000477676 ZNF646O15015 1829 aaPredicted RBP6.09□□□□□ -1.44
CKS1B-207ENST00000477676 SZT2Q5T011 3432 aa6.08□□□□□ -1.44
CKS1B-207ENST00000477676 MAP3K15Q6ZN16 1313 aa6.08□□□□□ -1.44
CKS1B-207ENST00000477676 ERVV-1B6SEH8 477 aa6.08□□□□□ -1.44
CKS1B-207ENST00000477676 NPIPB6E9PJ23 425 aa6.08□□□□□ -1.44
CKS1B-207ENST00000477676 H3BRB1 525 aa6.08□□□□□ -1.44
CKS1B-207ENST00000477676 TCERG1O14776 1098 aaKnown RBP6.08□□□□□ -1.44
CKS1B-207ENST00000477676 GADD45BO75293 160 aaPredicted RBP6.08□□□□□ -1.44
CKS1B-207ENST00000477676 GLI1P08151 1106 aa6.08□□□□□ -1.44
CKS1B-207ENST00000477676 U2AF1L5P0DN76 240 aaPredicted RBP6.08□□□□□ -1.44
CKS1B-207ENST00000477676 LIG1P18858 919 aa6.08□□□□□ -1.44
CKS1B-207ENST00000477676 ITIH2P19823 946 aa6.08□□□□□ -1.44
CKS1B-207ENST00000477676 ALDH1B1P30837 517 aa6.08□□□□□ -1.44
CKS1B-207ENST00000477676 RGS19P49795 217 aa6.08□□□□□ -1.44
CKS1B-207ENST00000477676 CTSWP56202 376 aa6.08□□□□□ -1.44
CKS1B-207ENST00000477676 EIF4A1P60842 406 aaKnown RBP6.08□□□□□ -1.44
CKS1B-207ENST00000477676 U2AF1Q01081 240 aaKnown RBP eCLIP6.08□□□□□ -1.44
CKS1B-207ENST00000477676 PROSER3Q2NL68 480 aa6.08□□□□□ -1.44
CKS1B-207ENST00000477676 MPZL3Q6UWV2 235 aa6.08□□□□□ -1.44
CKS1B-207ENST00000477676 ZNF34Q8IZ26 560 aa6.08□□□□□ -1.44
CKS1B-207ENST00000477676 WDR89Q96FK6 387 aaPredicted RBP6.08□□□□□ -1.44
CKS1B-207ENST00000477676 FANCD2OSQ96PS1 177 aa6.08□□□□□ -1.44
CKS1B-207ENST00000477676 TUT1Q9H6E5 874 aaKnown RBP6.08□□□□□ -1.44
CKS1B-207ENST00000477676 DISC1Q9NRI5 854 aa6.08□□□□□ -1.44
CKS1B-207ENST00000477676 ABT1Q9ULW3 272 aaKnown RBP6.08□□□□□ -1.44
CKS1B-207ENST00000477676 RRP7AQ9Y3A4 280 aaKnown RBP6.08□□□□□ -1.44
CKS1B-207ENST00000477676 IBTKQ9P2D0 1353 aaPredicted RBP6.07□□□□□ -1.44
CKS1B-207ENST00000477676 HTATSF1O43719 755 aaKnown RBP6.07□□□□□ -1.44
CKS1B-207ENST00000477676 ANXA1P04083 346 aa6.07□□□□□ -1.44
CKS1B-207ENST00000477676 ITPKAP23677 461 aa6.07□□□□□ -1.44
CKS1B-207ENST00000477676 CXCL9Q07325 125 aa6.07□□□□□ -1.44
CKS1B-207ENST00000477676 IKZF1Q13422 519 aa6.07□□□□□ -1.44
CKS1B-207ENST00000477676 NPM2Q86SE8 214 aaKnown RBP6.07□□□□□ -1.44
CKS1B-207ENST00000477676 ASB11Q8WXH4 323 aa6.07□□□□□ -1.44
CKS1B-207ENST00000477676 JDP2Q8WYK2 163 aa6.07□□□□□ -1.44
CKS1B-207ENST00000477676 GPR101Q96P66 508 aaPredicted RBP6.07□□□□□ -1.44
CKS1B-207ENST00000477676 CRAMP1Q96RY5 1269 aa6.07□□□□□ -1.44
CKS1B-207ENST00000477676 PLEKHF1Q96S99 279 aa6.07□□□□□ -1.44
CKS1B-207ENST00000477676 GLIS2Q9BZE0 524 aaPredicted RBP6.07□□□□□ -1.44
CKS1B-207ENST00000477676 ZNF576Q9H609 170 aa6.07□□□□□ -1.44
CKS1B-207ENST00000477676 KIAA0100Q14667 2235 aaKnown RBP6.06□□□□□ -1.44
CKS1B-207ENST00000477676 ABCC4O15439 1325 aa6.06□□□□□ -1.44
CKS1B-207ENST00000477676 YDJCA8MPS7 323 aa6.06□□□□□ -1.44
CKS1B-207ENST00000477676 RNGTTO60942 597 aaKnown RBP6.06□□□□□ -1.44
CKS1B-207ENST00000477676 MYL6BP14649 208 aa6.06□□□□□ -1.44
CKS1B-207ENST00000477676 GMPSP49915 693 aaPredicted RBP6.06□□□□□ -1.44
CKS1B-207ENST00000477676 EIF6P56537 245 aaKnown RBP6.06□□□□□ -1.44
CKS1B-207ENST00000477676 MAP2K1Q02750 393 aaPredicted RBP6.06□□□□□ -1.44
CKS1B-207ENST00000477676 GRM1Q13255 1194 aa6.06□□□□□ -1.44
CKS1B-207ENST00000477676 SLC10A5Q5PT55 438 aa6.06□□□□□ -1.44
CKS1B-207ENST00000477676 USP50Q70EL3 339 aaPredicted RBP6.06□□□□□ -1.44
CKS1B-207ENST00000477676 SAPCD2Q86UD0 394 aa6.06□□□□□ -1.44
CKS1B-207ENST00000477676 RTF1Q92541 710 aaKnown RBP6.06□□□□□ -1.44
CKS1B-207ENST00000477676 HEXIM2Q96MH2 286 aaKnown RBP6.06□□□□□ -1.44
CKS1B-207ENST00000477676 RTFDC1Q9BY42 306 aaPredicted RBP6.06□□□□□ -1.44
CKS1B-207ENST00000477676 NYXQ9GZU5 481 aa6.06□□□□□ -1.44
CKS1B-207ENST00000477676 GPRC5DQ9NZD1 345 aa6.06□□□□□ -1.44
CKS1B-207ENST00000477676 PGAP2Q9UHJ9 254 aa6.06□□□□□ -1.44
CKS1B-207ENST00000477676 CEP290O15078 2479 aa6.06□□□□□ -1.44
CKS1B-207ENST00000477676 SPEF2Q9C093 1822 aa6.06□□□□□ -1.44
CKS1B-207ENST00000477676 CCDC85CA6NKD9 419 aa6.05□□□□□ -1.44
CKS1B-207ENST00000477676 PPIP5K2O43314 1243 aa6.05□□□□□ -1.44
CKS1B-207ENST00000477676 CELF2O95319 508 aaKnown RBP6.05□□□□□ -1.44
CKS1B-207ENST00000477676 XRCC5P13010 732 aaKnown RBP6.05□□□□□ -1.44
CKS1B-207ENST00000477676 HCLS1P14317 486 aaPredicted RBP6.05□□□□□ -1.44
CKS1B-207ENST00000477676 ID3Q02535 119 aa6.05□□□□□ -1.44
CKS1B-207ENST00000477676 TTLL4Q14679 1199 aa6.05□□□□□ -1.44
CKS1B-207ENST00000477676 TMEM67Q5HYA8 995 aa6.05□□□□□ -1.44
CKS1B-207ENST00000477676 FBXO15Q8NCQ5 510 aaPredicted RBP6.05□□□□□ -1.44
CKS1B-207ENST00000477676 RPGRQ92834 1020 aaKnown RBP6.05□□□□□ -1.44
CKS1B-207ENST00000477676 ZNF428Q96B54 188 aa6.05□□□□□ -1.44
CKS1B-207ENST00000477676 RBM17Q96I25 401 aaKnown RBP6.05□□□□□ -1.44
CKS1B-207ENST00000477676 KIRREL1Q96J84 757 aa6.05□□□□□ -1.44
CKS1B-207ENST00000477676 C20orf173Q96LM9 149 aa6.05□□□□□ -1.44
CKS1B-207ENST00000477676 CFAP53Q96M91 514 aa6.05□□□□□ -1.44
CKS1B-207ENST00000477676 DMRTB1Q96MA1 342 aa6.05□□□□□ -1.44
CKS1B-207ENST00000477676 MCOLN1Q9GZU1 580 aa6.05□□□□□ -1.44
CKS1B-207ENST00000477676 CCDC86Q9H6F5 360 aaKnown RBP6.05□□□□□ -1.44
CKS1B-207ENST00000477676 SSU72Q9NP77 194 aaKnown RBP6.05□□□□□ -1.44
CKS1B-207ENST00000477676 NPHS2Q9NP85 383 aa6.05□□□□□ -1.44
CKS1B-207ENST00000477676 KCNQ5Q9NR82 932 aa6.05□□□□□ -1.44
CKS1B-207ENST00000477676 ADARB2Q9NS39 739 aaKnown RBP6.05□□□□□ -1.44
CKS1B-207ENST00000477676 KRT82Q9NSB4 513 aa6.05□□□□□ -1.44
CKS1B-207ENST00000477676 PCOLCE2Q9UKZ9 415 aa6.05□□□□□ -1.44
CKS1B-207ENST00000477676 ATP6V0A2Q9Y487 856 aa6.05□□□□□ -1.44
CKS1B-207ENST00000477676 RANBP2P49792 3224 aaKnown RBP6.05□□□□□ -1.44
CKS1B-207ENST00000477676 FAM155AB1AL88 458 aaPredicted RBP6.04□□□□□ -1.44
CKS1B-207ENST00000477676 RAD17O75943 681 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms