RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 ANKRD18AQ8IVF6 992 aa15.02□□□□□ -0.01
HLA-DMA-208ENST00000477541 SYN2Q92777 582 aaPredicted RBP15.02□□□□□ -0.01
HLA-DMA-208ENST00000477541 SLC4A9Q96Q91 983 aa15.02□□□□□ -0.01
HLA-DMA-208ENST00000477541 RNF216Q9NWF9 866 aaPredicted RBP15.02□□□□□ -0.01
HLA-DMA-208ENST00000477541 STK17AQ9UEE5 414 aa15.02□□□□□ -0.01
HLA-DMA-208ENST00000477541 LRWD1Q9UFC0 647 aa15.02□□□□□ -0.01
HLA-DMA-208ENST00000477541 MAPK8IP1Q9UQF2 711 aa15.02□□□□□ -0.01
HLA-DMA-208ENST00000477541 FAM169AQ9Y6X4 670 aa15.02□□□□□ -0.01
HLA-DMA-208ENST00000477541 ROBO3Q96MS0 1386 aa15.02□□□□□ -0.01
HLA-DMA-208ENST00000477541 SPATA31A1Q5TZJ5 1347 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 MACROD2A1Z1Q3 448 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 USP17L12C9JPN9 530 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 USP17L21D6R901 530 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 RBAK-RBAKDNI3L0D1 243 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 EXOC5O00471 708 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 PAK2Q13177 524 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 CFAP221Q4G0U5 840 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 VWA3BQ502W6 1294 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 MCTP2Q6DN12 878 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 C8orf74Q6P047 294 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 CABP7Q86V35 215 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 BCAS4Q8TDM0 211 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 NOX5Q96PH1 765 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 PCDHA6Q9UN73 950 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 SIK3Q9Y2K2 1263 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 PCDHA8Q9Y5H6 950 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 FAM205AQ6ZU69 1335 aa15.01□□□□□ -0.01
HLA-DMA-208ENST00000477541 CES2O00748 559 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 NTSR2O95665 410 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 OR52Z1P0C646 297 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 CCT5P48643 541 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 GNGT1P63211 74 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 ANKRD40Q6AI12 368 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 KDM7AQ6ZMT4 941 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 RPAINQ86UA6 219 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 TACO1Q9BSH4 297 aaKnown RBP15□□□□□ -0.01
HLA-DMA-208ENST00000477541 LRRC1Q9BTT6 524 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 DCP1AQ9NPI6 582 aaPredicted RBP15□□□□□ -0.01
HLA-DMA-208ENST00000477541 BARHL2Q9NY43 387 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 ATAD5Q96QE3 1844 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 TSPY2A6NKD2 308 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 ZNF263O14978 683 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 ZNF185O15231 689 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 SMARCA1P28370 1054 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 IRX3P78415 501 aaPredicted RBP15□□□□□ -0.01
HLA-DMA-208ENST00000477541 PSMD2Q13200 908 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 HAUS3Q68CZ6 603 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 RCSD1Q6JBY9 416 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 PROM2Q8N271 834 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 MICALL1Q8N3F8 863 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 GUF1Q8N442 669 aaKnown RBP15□□□□□ -0.01
HLA-DMA-208ENST00000477541 C3orf20Q8ND61 904 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 WHAMMQ8TF30 809 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 RIN2Q8WYP3 895 aaPredicted RBP15□□□□□ -0.01
HLA-DMA-208ENST00000477541 NDST4Q9H3R1 872 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 GDF3Q9NR23 364 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 BSDC1Q9NW68 430 aaPredicted RBP15□□□□□ -0.01
HLA-DMA-208ENST00000477541 ARHGAP20Q9P2F6 1191 aa15□□□□□ -0.01
HLA-DMA-208ENST00000477541 AKR1B10O60218 316 aa14.99□□□□□ -0.01
HLA-DMA-208ENST00000477541 KIAA0754O94854 1291 aa14.99□□□□□ -0.01
HLA-DMA-208ENST00000477541 PLCG1P19174 1290 aa14.99□□□□□ -0.01
HLA-DMA-208ENST00000477541 INPP5BP32019 993 aa14.99□□□□□ -0.01
HLA-DMA-208ENST00000477541 DYNLL1P63167 89 aaKnown RBP14.99□□□□□ -0.01
HLA-DMA-208ENST00000477541 ASIC1P78348 528 aa14.99□□□□□ -0.01
HLA-DMA-208ENST00000477541 NSUN4Q96CB9 384 aaKnown RBP14.99□□□□□ -0.01
HLA-DMA-208ENST00000477541 CALML4Q96GE6 196 aa14.99□□□□□ -0.01
HLA-DMA-208ENST00000477541 RIC8AQ9NPQ8 531 aa14.99□□□□□ -0.01
HLA-DMA-208ENST00000477541 CCDC87Q9NVE4 849 aa14.99□□□□□ -0.01
HLA-DMA-208ENST00000477541 CAPN6Q9Y6Q1 641 aa14.99□□□□□ -0.01
HLA-DMA-208ENST00000477541 ATP8B3O60423 1300 aa14.99□□□□□ -0.01
HLA-DMA-208ENST00000477541 MYH10P35580 1976 aa14.98□□□□□ -0.01
HLA-DMA-208ENST00000477541 hCG_1984214I3L0E3 225 aa14.98□□□□□ -0.01
HLA-DMA-208ENST00000477541 MAGEA1P43355 309 aa14.98□□□□□ -0.01
HLA-DMA-208ENST00000477541 DRP2Q13474 957 aa14.98□□□□□ -0.01
HLA-DMA-208ENST00000477541 SEPT2Q15019 361 aa14.98□□□□□ -0.01
HLA-DMA-208ENST00000477541 PLCB4Q15147 1175 aa14.98□□□□□ -0.01
HLA-DMA-208ENST00000477541 SF3B3Q15393 1217 aaKnown RBP14.98□□□□□ -0.01
HLA-DMA-208ENST00000477541 UNC13DQ70J99 1090 aa14.98□□□□□ -0.01
HLA-DMA-208ENST00000477541 CNPY4Q8N129 248 aa14.98□□□□□ -0.01
HLA-DMA-208ENST00000477541 ZNF713Q8N859 430 aaPredicted RBP14.98□□□□□ -0.01
HLA-DMA-208ENST00000477541 PNMA1Q8ND90 353 aa14.98□□□□□ -0.01
HLA-DMA-208ENST00000477541 ZMYND12Q9H0C1 365 aa14.98□□□□□ -0.01
HLA-DMA-208ENST00000477541 TMEM60Q9H2L4 133 aa14.98□□□□□ -0.01
HLA-DMA-208ENST00000477541 DMGDHQ9UI17 866 aaKnown RBP14.98□□□□□ -0.01
HLA-DMA-208ENST00000477541 ZNF652Q9Y2D9 606 aa14.98□□□□□ -0.01
HLA-DMA-208ENST00000477541 UTRNP46939 3433 aa14.98□□□□□ -0.01
HLA-DMA-208ENST00000477541 CYP2D7A0A087X1C5 515 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 HMGB1P1B2RPK0 211 aaPredicted RBP14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 SNAP23O00161 211 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 STXBP3O00186 592 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 ZMYND10O75800 440 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 CAMTA2O94983 1202 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 FSBPO95073 299 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 GNA11P29992 359 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 EIF4A3P38919 411 aaKnown RBP14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 SETQ01105 290 aaPredicted RBP14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 CYP27A1Q02318 531 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 PDE4CQ08493 712 aa14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 NONOQ15233 471 aaKnown RBP eCLIP14.97□□□□□ -0.01
HLA-DMA-208ENST00000477541 ASTE1Q2TB18 679 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms