RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 KCNJ14Q9UNX9 436 aa19.29■□□□□ 0.68
EPHB4-204ENST00000477446 POTEB2H3BUK9 544 aa19.28■□□□□ 0.68
EPHB4-204ENST00000477446 PIK3CDO00329 1044 aa19.28■□□□□ 0.68
EPHB4-204ENST00000477446 ADAMTS3O15072 1205 aa19.28■□□□□ 0.68
EPHB4-204ENST00000477446 MRPL12P52815 198 aaKnown RBP19.28■□□□□ 0.68
EPHB4-204ENST00000477446 FOSBP53539 338 aa19.28■□□□□ 0.68
EPHB4-204ENST00000477446 NLRP5P59047 1200 aa19.28■□□□□ 0.68
EPHB4-204ENST00000477446 KRT85P78386 507 aa19.28■□□□□ 0.68
EPHB4-204ENST00000477446 UBE2SQ16763 222 aa19.28■□□□□ 0.68
EPHB4-204ENST00000477446 ZNF792Q3KQV3 632 aa19.28■□□□□ 0.68
EPHB4-204ENST00000477446 FAM177A1Q8N128 213 aaPredicted RBP19.28■□□□□ 0.68
EPHB4-204ENST00000477446 FAM133AQ8N9E0 248 aa19.28■□□□□ 0.68
EPHB4-204ENST00000477446 SYTL5Q8TDW5 730 aaPredicted RBP19.28■□□□□ 0.68
EPHB4-204ENST00000477446 PHF20Q9BVI0 1012 aa19.28■□□□□ 0.68
EPHB4-204ENST00000477446 ZSCAN16Q9H4T2 348 aaPredicted RBP19.28■□□□□ 0.68
EPHB4-204ENST00000477446 C6orf50Q9HD87 102 aa19.28■□□□□ 0.68
EPHB4-204ENST00000477446 COL20A1Q9P218 1284 aa19.28■□□□□ 0.68
EPHB4-204ENST00000477446 HOXC6P09630 235 aa19.27■□□□□ 0.68
EPHB4-204ENST00000477446 CYP2B6P20813 491 aa19.27■□□□□ 0.68
EPHB4-204ENST00000477446 GNA11P29992 359 aa19.27■□□□□ 0.68
EPHB4-204ENST00000477446 RGS2P41220 211 aa19.27■□□□□ 0.68
EPHB4-204ENST00000477446 NPLOC4Q8TAT6 608 aa19.27■□□□□ 0.68
EPHB4-204ENST00000477446 SOWAHBA6NEL2 793 aa19.27■□□□□ 0.67
EPHB4-204ENST00000477446 NPY5RQ15761 445 aa19.27■□□□□ 0.67
EPHB4-204ENST00000477446 LRSAM1Q6UWE0 723 aa19.27■□□□□ 0.67
EPHB4-204ENST00000477446 C8orf76Q96K31 380 aa19.27■□□□□ 0.67
EPHB4-204ENST00000477446 TAAR1Q96RJ0 339 aa19.27■□□□□ 0.67
EPHB4-204ENST00000477446 GLT8D2Q9H1C3 349 aa19.27■□□□□ 0.67
EPHB4-204ENST00000477446 TMEM63CQ9P1W3 806 aa19.27■□□□□ 0.67
EPHB4-204ENST00000477446 CNPY2Q9Y2B0 182 aa19.27■□□□□ 0.67
EPHB4-204ENST00000477446 CLK2P49760 499 aaKnown RBP19.26■□□□□ 0.67
EPHB4-204ENST00000477446 PRMT2P55345 433 aa19.26■□□□□ 0.67
EPHB4-204ENST00000477446 TRIM29Q14134 588 aa19.26■□□□□ 0.67
EPHB4-204ENST00000477446 KRT40Q6A162 431 aa19.26■□□□□ 0.67
EPHB4-204ENST00000477446 FCHSD1Q86WN1 690 aa19.26■□□□□ 0.67
EPHB4-204ENST00000477446 ANP32BQ92688 251 aaKnown RBP19.26■□□□□ 0.67
EPHB4-204ENST00000477446 CHAMP1Q96JM3 812 aa19.26■□□□□ 0.67
EPHB4-204ENST00000477446 FGD4Q96M96 766 aa19.26■□□□□ 0.67
EPHB4-204ENST00000477446 APBA2Q99767 749 aa19.26■□□□□ 0.67
EPHB4-204ENST00000477446 SCAND2PQ9GZW5 306 aaPredicted RBP19.26■□□□□ 0.67
EPHB4-204ENST00000477446 PRDM10Q9NQV6 1147 aa19.26■□□□□ 0.67
EPHB4-204ENST00000477446 SLC5A4Q9NY91 659 aa19.26■□□□□ 0.67
EPHB4-204ENST00000477446 BIN2Q9UBW5 565 aaPredicted RBP19.26■□□□□ 0.67
EPHB4-204ENST00000477446 PCDHA4Q9UN74 947 aa19.26■□□□□ 0.67
EPHB4-204ENST00000477446 DIS3Q9Y2L1 958 aaKnown RBP19.26■□□□□ 0.67
EPHB4-204ENST00000477446 ASTN1O14525 1302 aa19.26■□□□□ 0.67
EPHB4-204ENST00000477446 ELP1O95163 1332 aa19.26■□□□□ 0.67
EPHB4-204ENST00000477446 XRCC5P13010 732 aaKnown RBP19.25■□□□□ 0.67
EPHB4-204ENST00000477446 GUCY1B3Q02153 619 aa19.25■□□□□ 0.67
EPHB4-204ENST00000477446 IRF5Q13568 498 aa19.25■□□□□ 0.67
EPHB4-204ENST00000477446 GALNT17Q6IS24 598 aa19.25■□□□□ 0.67
EPHB4-204ENST00000477446 CTU1Q7Z7A3 348 aaKnown RBP19.25■□□□□ 0.67
EPHB4-204ENST00000477446 TEX2Q8IWB9 1127 aa19.25■□□□□ 0.67
EPHB4-204ENST00000477446 BLIDQ8IZY5 108 aa19.25■□□□□ 0.67
EPHB4-204ENST00000477446 DAGLBQ8NCG7 672 aa19.25■□□□□ 0.67
EPHB4-204ENST00000477446 FBXO18Q8NFZ0 1043 aa19.25■□□□□ 0.67
EPHB4-204ENST00000477446 MAML3Q96JK9 1138 aa19.25■□□□□ 0.67
EPHB4-204ENST00000477446 TMEM260Q9NX78 707 aa19.25■□□□□ 0.67
EPHB4-204ENST00000477446 H3BQV1 296 aa19.24■□□□□ 0.67
EPHB4-204ENST00000477446 MMP1P03956 469 aa19.24■□□□□ 0.67
EPHB4-204ENST00000477446 DNM1Q05193 864 aaKnown RBP19.24■□□□□ 0.67
EPHB4-204ENST00000477446 CCL14Q16627 93 aa19.24■□□□□ 0.67
EPHB4-204ENST00000477446 FOXD4L6Q3SYB3 417 aaPredicted RBP19.24■□□□□ 0.67
EPHB4-204ENST00000477446 FOXD4L3Q6VB84 417 aaPredicted RBP19.24■□□□□ 0.67
EPHB4-204ENST00000477446 REXO1Q8N1G1 1221 aaKnown RBP19.24■□□□□ 0.67
EPHB4-204ENST00000477446 DNERQ8NFT8 737 aa19.24■□□□□ 0.67
EPHB4-204ENST00000477446 BICD2Q8TD16 824 aa19.24■□□□□ 0.67
EPHB4-204ENST00000477446 RMDN3Q96TC7 470 aa19.24■□□□□ 0.67
EPHB4-204ENST00000477446 FLRT1Q9NZU1 646 aa19.24■□□□□ 0.67
EPHB4-204ENST00000477446 PTPN22Q9Y2R2 807 aa19.24■□□□□ 0.67
EPHB4-204ENST00000477446 JAKMIP3Q5VZ66 844 aa19.23■□□□□ 0.67
EPHB4-204ENST00000477446 ATL3Q6DD88 541 aa19.23■□□□□ 0.67
EPHB4-204ENST00000477446 RAET1EQ8TD07 263 aa19.23■□□□□ 0.67
EPHB4-204ENST00000477446 RASGRP4Q8TDF6 673 aa19.23■□□□□ 0.67
EPHB4-204ENST00000477446 GDPD2Q9HCC8 539 aa19.23■□□□□ 0.67
EPHB4-204ENST00000477446 ADD3Q9UEY8 706 aaKnown RBP19.23■□□□□ 0.67
EPHB4-204ENST00000477446 M0R2N6 131 aa19.23■□□□□ 0.67
EPHB4-204ENST00000477446 GADD45BO75293 160 aaPredicted RBP19.23■□□□□ 0.67
EPHB4-204ENST00000477446 ALDH5A1P51649 535 aaPredicted RBP19.23■□□□□ 0.67
EPHB4-204ENST00000477446 CCDC183Q5T5S1 534 aa19.23■□□□□ 0.67
EPHB4-204ENST00000477446 ZNF467Q7Z7K2 595 aaPredicted RBP19.23■□□□□ 0.67
EPHB4-204ENST00000477446 OXER1Q8TDS5 423 aa19.23■□□□□ 0.67
EPHB4-204ENST00000477446 NSUN6Q8TEA1 469 aaKnown RBP19.23■□□□□ 0.67
EPHB4-204ENST00000477446 PGBD1Q96JS3 809 aa19.23■□□□□ 0.67
EPHB4-204ENST00000477446 PXMP2Q9NR77 195 aa19.23■□□□□ 0.67
EPHB4-204ENST00000477446 PCDHA6Q9UN73 950 aa19.23■□□□□ 0.67
EPHB4-204ENST00000477446 PCDHA8Q9Y5H6 950 aa19.23■□□□□ 0.67
EPHB4-204ENST00000477446 PTCH2Q9Y6C5 1203 aa19.23■□□□□ 0.67
EPHB4-204ENST00000477446 MCM3APO60318 1980 aa19.22■□□□□ 0.67
EPHB4-204ENST00000477446 SPDYE3A6NKU9 549 aa19.22■□□□□ 0.67
EPHB4-204ENST00000477446 FIBPO43427 364 aa19.22■□□□□ 0.67
EPHB4-204ENST00000477446 ADCY3O60266 1144 aa19.22■□□□□ 0.67
EPHB4-204ENST00000477446 NASPP49321 788 aaPredicted RBP19.22■□□□□ 0.67
EPHB4-204ENST00000477446 AP3B2Q13367 1082 aa19.22■□□□□ 0.67
EPHB4-204ENST00000477446 ARHGEF16Q5VV41 709 aa19.22■□□□□ 0.67
EPHB4-204ENST00000477446 OLFML2BQ68BL8 750 aa19.22■□□□□ 0.67
EPHB4-204ENST00000477446 TRIB2Q92519 343 aa19.22■□□□□ 0.67
EPHB4-204ENST00000477446 BTBD18B2RXH4 712 aa19.21■□□□□ 0.67
EPHB4-204ENST00000477446 FOSP01100 380 aaPredicted RBP19.21■□□□□ 0.67
EPHB4-204ENST00000477446 IGHA2P01877 340 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms