RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 TFR2Q9UP52 801 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 ADGRG1Q9Y653 693 aa12.19□□□□□ -0.46
COL27A1-204ENST00000477421 PIK3C2AO00443 1686 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 E9PMD0 336 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 GH2P01242 217 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 C10orf67Q8IYJ2 551 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 RABGGTAQ92696 567 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 ABHD10Q9NUJ1 306 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 TCHHQ07283 1943 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 EIF4A3P38919 411 aaKnown RBP12.18□□□□□ -0.46
COL27A1-204ENST00000477421 GRM4Q14833 912 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 KRT26Q7Z3Y9 468 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 ZNF710Q8N1W2 664 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 PANX2Q96RD6 677 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 NDST4Q9H3R1 872 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 HDAC6Q9UBN7 1215 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 SCAF8Q9UPN6 1271 aaKnown RBP12.18□□□□□ -0.46
COL27A1-204ENST00000477421 KNDC1Q76NI1 1749 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 NAA35Q5VZE5 725 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 U2AF1L4Q8WU68 220 aaKnown RBP12.18□□□□□ -0.46
COL27A1-204ENST00000477421 MTA3Q9BTC8 594 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 NHEJ1Q9H9Q4 299 aaPredicted RBP12.18□□□□□ -0.46
COL27A1-204ENST00000477421 PCDHA6Q9UN73 950 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 PCDHA8Q9Y5H6 950 aa12.18□□□□□ -0.46
COL27A1-204ENST00000477421 AFF2P51816 1311 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 CNTNAP5Q8WYK1 1306 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 SALL1Q9NSC2 1324 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 LAD1O00515 517 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
COL27A1-204ENST00000477421 TNFAIP3P21580 790 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 FKBP3Q00688 224 aaKnown RBP12.17□□□□□ -0.46
COL27A1-204ENST00000477421 NCAPHQ15003 741 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 CDC37Q16543 378 aaPredicted RBP12.17□□□□□ -0.46
COL27A1-204ENST00000477421 PIAS4Q8N2W9 510 aaPredicted RBP12.17□□□□□ -0.46
COL27A1-204ENST00000477421 TC2NQ8N9U0 490 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 PIGOQ8TEQ8 1089 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 GLT8D2Q9H1C3 349 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 ADAMTS1Q9UHI8 967 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 DDX41Q9UJV9 622 aaKnown RBP12.17□□□□□ -0.46
COL27A1-204ENST00000477421 RGPD8O14715 1765 aaPredicted RBP12.17□□□□□ -0.46
COL27A1-204ENST00000477421 MON2Q7Z3U7 1717 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 TESPA1A2RU30 521 aaPredicted RBP12.17□□□□□ -0.46
COL27A1-204ENST00000477421 KCNK3O14649 394 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 CCDC172P0C7W6 258 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 PNMA6AP0CW24 399 aaPredicted RBP12.17□□□□□ -0.46
COL27A1-204ENST00000477421 RASA1P20936 1047 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 GABPB1Q06547 395 aaPredicted RBP12.17□□□□□ -0.46
COL27A1-204ENST00000477421 STK4Q13043 487 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 CCDC127Q96BQ5 260 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 CCDC17Q96LX7 622 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 NAP1L4Q99733 375 aaKnown RBP12.17□□□□□ -0.46
COL27A1-204ENST00000477421 BHMT2Q9H2M3 363 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 TRIM10Q9UDY6 481 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 MOCS3O95396 460 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 POTEJP0CG39 1038 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 STAT3P40763 770 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 RCAN1P53805 252 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 SEC23AQ15436 765 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 WHAMMP3Q1A5X7 153 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 PPP4R3AQ6IN85 833 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 DPH6Q7L8W6 267 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 FAM178BQ8IXR5 827 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 TRIM58Q8NG06 486 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 PSMD1Q99460 953 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 HPSEQ9Y251 543 aa12.17□□□□□ -0.46
COL27A1-204ENST00000477421 NRXN3Q9Y4C0 1643 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 POTEB3A0JP26 581 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 POTECB2RU33 542 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 PRPF6O94906 941 aaKnown RBP12.16□□□□□ -0.46
COL27A1-204ENST00000477421 FTCDO95954 541 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 KRT5P13647 590 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 POTEBQ6S5H4 581 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 RAD9BQ6WBX8 426 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 FAM133AQ8N9E0 248 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 NEDD1Q8NHV4 660 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 TBC1D16Q8TBP0 767 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 UBLCP1Q8WVY7 318 aaPredicted RBP12.16□□□□□ -0.46
COL27A1-204ENST00000477421 IL17RAQ96F46 866 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 STK32BQ9NY57 414 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 PNMA6FA0A0J9YX94 578 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 GOLGA6L10A0A0M3HER8 536 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 GOLGA6BA6NDN3 693 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 C21orf2O43822 256 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 CALUO43852 315 aaPredicted RBP12.16□□□□□ -0.46
COL27A1-204ENST00000477421 EEF2P13639 858 aaKnown RBP12.16□□□□□ -0.46
COL27A1-204ENST00000477421 DPYDQ12882 1025 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 BIRC3Q13489 604 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 PI4KBQ9UBF8 816 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 PLA2G4BP0C869 781 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 SLC7A5Q01650 507 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 RPS6KA1Q15418 735 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 ODR4Q5SWX8 454 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 PEX26Q7Z412 305 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 NKX2-3Q8TAU0 364 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 COA1Q9GZY4 146 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 EMILIN3Q9NT22 766 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 MYO1AQ9UBC5 1043 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 DAGLAQ9Y4D2 1042 aa12.16□□□□□ -0.46
COL27A1-204ENST00000477421 SPATA31A5Q5VU36 1347 aa12.15□□□□□ -0.46
COL27A1-204ENST00000477421 SPATA31A7Q8IWB4 1347 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 204 ms