RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 CBFA2T2O43439 604 aa6.31□□□□□ -1.4
PIKFYVE-209ENST00000477200 ITGAEP38570 1179 aa6.31□□□□□ -1.4
PIKFYVE-209ENST00000477200 EEF1DP3Q658K8 133 aa6.31□□□□□ -1.4
PIKFYVE-209ENST00000477200 MCTP2Q6DN12 878 aa6.31□□□□□ -1.4
PIKFYVE-209ENST00000477200 CRIP3Q6Q6R5 217 aa6.31□□□□□ -1.4
PIKFYVE-209ENST00000477200 RUFY4Q6ZNE9 571 aa6.31□□□□□ -1.4
PIKFYVE-209ENST00000477200 CPNE8Q86YQ8 564 aa6.31□□□□□ -1.4
PIKFYVE-209ENST00000477200 DIS3Q9Y2L1 958 aaKnown RBP6.31□□□□□ -1.4
PIKFYVE-209ENST00000477200 VAMP4O75379 141 aa6.3□□□□□ -1.4
PIKFYVE-209ENST00000477200 FAM26FQ5R3K3 315 aa6.3□□□□□ -1.4
PIKFYVE-209ENST00000477200 WWC2Q6AWC2 1192 aa6.3□□□□□ -1.4
PIKFYVE-209ENST00000477200 GLB1LQ6UWU2 654 aa6.3□□□□□ -1.4
PIKFYVE-209ENST00000477200 STK32CQ86UX6 486 aa6.3□□□□□ -1.4
PIKFYVE-209ENST00000477200 FAM26EQ8N5C1 309 aa6.3□□□□□ -1.4
PIKFYVE-209ENST00000477200 TXNDC5Q8NBS9 432 aaKnown RBP6.3□□□□□ -1.4
PIKFYVE-209ENST00000477200 TM9SF2Q99805 663 aa6.3□□□□□ -1.4
PIKFYVE-209ENST00000477200 ZNF214Q9UL59 606 aaPredicted RBP6.3□□□□□ -1.4
PIKFYVE-209ENST00000477200 TSC22D4Q9Y3Q8 395 aa6.3□□□□□ -1.4
PIKFYVE-209ENST00000477200 STXBP3O00186 592 aa6.29□□□□□ -1.4
PIKFYVE-209ENST00000477200 CYR61O00622 381 aa6.29□□□□□ -1.4
PIKFYVE-209ENST00000477200 C9orf131Q5VYM1 1079 aa6.29□□□□□ -1.4
PIKFYVE-209ENST00000477200 KYQ8NBH2 561 aa6.29□□□□□ -1.4
PIKFYVE-209ENST00000477200 PKNOX2Q96KN3 472 aa6.29□□□□□ -1.4
PIKFYVE-209ENST00000477200 SPON2Q9BUD6 331 aa6.29□□□□□ -1.4
PIKFYVE-209ENST00000477200 NTRK1P04629 796 aa6.28□□□□□ -1.4
PIKFYVE-209ENST00000477200 IMPDH2P12268 514 aa6.28□□□□□ -1.4
PIKFYVE-209ENST00000477200 ICAM4Q14773 271 aa6.28□□□□□ -1.4
PIKFYVE-209ENST00000477200 TCEAL1Q15170 157 aa6.28□□□□□ -1.4
PIKFYVE-209ENST00000477200 DPY19L1Q2PZI1 675 aa6.28□□□□□ -1.4
PIKFYVE-209ENST00000477200 PRR31Q5SQ13 230 aa6.28□□□□□ -1.4
PIKFYVE-209ENST00000477200 BORAQ6PGQ7 559 aa6.28□□□□□ -1.4
PIKFYVE-209ENST00000477200 KIAA0825Q8IV33 1275 aa6.28□□□□□ -1.4
PIKFYVE-209ENST00000477200 ADCY4Q8NFM4 1077 aa6.28□□□□□ -1.4
PIKFYVE-209ENST00000477200 USP33Q8TEY7 942 aa6.28□□□□□ -1.4
PIKFYVE-209ENST00000477200 ZNF747Q9BV97 191 aa6.28□□□□□ -1.4
PIKFYVE-209ENST00000477200 PODXL2Q9NZ53 605 aa6.28□□□□□ -1.4
PIKFYVE-209ENST00000477200 PPP4R1LQ9P1A2 415 aa6.28□□□□□ -1.4
PIKFYVE-209ENST00000477200 LTBP3Q9NS15 1303 aa6.27□□□□□ -1.41
PIKFYVE-209ENST00000477200 C2orf71A6NGG8 1288 aa6.27□□□□□ -1.41
PIKFYVE-209ENST00000477200 GUCY2CP25092 1073 aa6.27□□□□□ -1.41
PIKFYVE-209ENST00000477200 RANGAP1P46060 587 aaPredicted RBP6.27□□□□□ -1.41
PIKFYVE-209ENST00000477200 FAM124AQ86V42 546 aa6.27□□□□□ -1.41
PIKFYVE-209ENST00000477200 KISS1RQ969F8 398 aaPredicted RBP6.27□□□□□ -1.41
PIKFYVE-209ENST00000477200 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.27□□□□□ -1.41
PIKFYVE-209ENST00000477200 C7orf72A4D263 438 aa6.26□□□□□ -1.41
PIKFYVE-209ENST00000477200 DDX3XO00571 662 aaKnown RBP eCLIP6.26□□□□□ -1.41
PIKFYVE-209ENST00000477200 B4GALT3O60512 393 aa6.26□□□□□ -1.41
PIKFYVE-209ENST00000477200 FUCA1P04066 466 aa6.26□□□□□ -1.41
PIKFYVE-209ENST00000477200 SEPHS1P49903 392 aa6.26□□□□□ -1.41
PIKFYVE-209ENST00000477200 CD300LDQ6UXZ3 194 aa6.26□□□□□ -1.41
PIKFYVE-209ENST00000477200 RBBP8NLQ8NC74 664 aaPredicted RBP6.26□□□□□ -1.41
PIKFYVE-209ENST00000477200 PLEKHO2Q8TD55 490 aa6.26□□□□□ -1.41
PIKFYVE-209ENST00000477200 FERD3LQ96RJ6 166 aa6.26□□□□□ -1.41
PIKFYVE-209ENST00000477200 KLC2Q9H0B6 622 aa6.26□□□□□ -1.41
PIKFYVE-209ENST00000477200 SLITRK6Q9H5Y7 841 aa6.26□□□□□ -1.41
PIKFYVE-209ENST00000477200 PCDH18Q9HCL0 1135 aa6.26□□□□□ -1.41
PIKFYVE-209ENST00000477200 CD248Q9HCU0 757 aa6.26□□□□□ -1.41
PIKFYVE-209ENST00000477200 WHRNQ9P202 907 aa6.26□□□□□ -1.41
PIKFYVE-209ENST00000477200 BACE2Q9Y5Z0 518 aa6.26□□□□□ -1.41
PIKFYVE-209ENST00000477200 FZD7O75084 574 aa6.25□□□□□ -1.41
PIKFYVE-209ENST00000477200 PAMP19021 973 aa6.25□□□□□ -1.41
PIKFYVE-209ENST00000477200 ITGA1P56199 1179 aa6.25□□□□□ -1.41
PIKFYVE-209ENST00000477200 MRPL58Q14197 206 aaKnown RBP6.25□□□□□ -1.41
PIKFYVE-209ENST00000477200 ETV3LQ6ZN32 361 aa6.25□□□□□ -1.41
PIKFYVE-209ENST00000477200 MIB1Q86YT6 1006 aa6.25□□□□□ -1.41
PIKFYVE-209ENST00000477200 TTLL6Q8N841 843 aa6.25□□□□□ -1.41
PIKFYVE-209ENST00000477200 HAUS7Q99871 368 aa6.25□□□□□ -1.41
PIKFYVE-209ENST00000477200 KLHL25Q9H0H3 589 aa6.25□□□□□ -1.41
PIKFYVE-209ENST00000477200 NPHP3-ACAD11A0A0J9YXS1 232 aa6.24□□□□□ -1.41
PIKFYVE-209ENST00000477200 SGSM2O43147 1006 aa6.24□□□□□ -1.41
PIKFYVE-209ENST00000477200 LAMTOR5O43504 91 aa6.24□□□□□ -1.41
PIKFYVE-209ENST00000477200 AMHP03971 560 aa6.24□□□□□ -1.41
PIKFYVE-209ENST00000477200 FBXW10Q5XX13 1052 aa6.24□□□□□ -1.41
PIKFYVE-209ENST00000477200 RNF34Q969K3 372 aa6.24□□□□□ -1.41
PIKFYVE-209ENST00000477200 LCORQ96JN0 433 aaPredicted RBP6.24□□□□□ -1.41
PIKFYVE-209ENST00000477200 PCED1AQ9H1Q7 454 aa6.24□□□□□ -1.41
PIKFYVE-209ENST00000477200 VPS11Q9H270 941 aa6.24□□□□□ -1.41
PIKFYVE-209ENST00000477200 PPT2Q9UMR5 302 aa6.24□□□□□ -1.41
PIKFYVE-209ENST00000477200 GPR42O15529 346 aa6.23□□□□□ -1.41
PIKFYVE-209ENST00000477200 NPHS1O60500 1241 aa6.23□□□□□ -1.41
PIKFYVE-209ENST00000477200 CRB2Q5IJ48 1285 aa6.23□□□□□ -1.41
PIKFYVE-209ENST00000477200 DPF3Q92784 378 aa6.23□□□□□ -1.41
PIKFYVE-209ENST00000477200 FGD4Q96M96 766 aa6.23□□□□□ -1.41
PIKFYVE-209ENST00000477200 AMPD2Q01433 879 aa6.22□□□□□ -1.41
PIKFYVE-209ENST00000477200 SURF1Q15526 300 aa6.22□□□□□ -1.41
PIKFYVE-209ENST00000477200 MBLAC2Q68D91 279 aa6.22□□□□□ -1.41
PIKFYVE-209ENST00000477200 HEATR6Q6AI08 1181 aaKnown RBP6.22□□□□□ -1.41
PIKFYVE-209ENST00000477200 DCP2Q8IU60 420 aaKnown RBP6.22□□□□□ -1.41
PIKFYVE-209ENST00000477200 DNERQ8NFT8 737 aa6.22□□□□□ -1.41
PIKFYVE-209ENST00000477200 CGGBP1Q9UFW8 167 aaPredicted RBP6.22□□□□□ -1.41
PIKFYVE-209ENST00000477200 C9orf118A6NHY6 69 aa6.21□□□□□ -1.42
PIKFYVE-209ENST00000477200 ADAM9Q13443 819 aa6.21□□□□□ -1.42
PIKFYVE-209ENST00000477200 GNPTABQ3T906 1256 aa6.21□□□□□ -1.42
PIKFYVE-209ENST00000477200 ZNF585AQ6P3V2 769 aa6.21□□□□□ -1.42
PIKFYVE-209ENST00000477200 ADAT2Q7Z6V5 191 aaKnown RBP6.21□□□□□ -1.42
PIKFYVE-209ENST00000477200 PALM2Q8IXS6 379 aa6.21□□□□□ -1.42
PIKFYVE-209ENST00000477200 ARHGEF39Q8N4T4 335 aa6.21□□□□□ -1.42
PIKFYVE-209ENST00000477200 MBD6Q96DN6 1003 aa6.21□□□□□ -1.42
PIKFYVE-209ENST00000477200 CDK5RAP1Q96SZ6 601 aaKnown RBP6.21□□□□□ -1.42
PIKFYVE-209ENST00000477200 MARCH2Q9P0N8 246 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms