RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 TAP1Q03518 808 aa13.46□□□□□ -0.25
LSM2-212ENST00000477182 GRB10Q13322 594 aa13.46□□□□□ -0.25
LSM2-212ENST00000477182 ITGA7Q13683 1181 aa13.46□□□□□ -0.25
LSM2-212ENST00000477182 CCDC144BQ3MJ40 725 aa13.46□□□□□ -0.25
LSM2-212ENST00000477182 CLEC10AQ8IUN9 316 aa13.46□□□□□ -0.25
LSM2-212ENST00000477182 SPICE1Q8N0Z3 855 aa13.46□□□□□ -0.25
LSM2-212ENST00000477182 TTC14Q96N46 770 aa13.46□□□□□ -0.25
LSM2-212ENST00000477182 ZSCAN10Q96SZ4 725 aaPredicted RBP13.46□□□□□ -0.25
LSM2-212ENST00000477182 WNT8AQ9H1J5 351 aa13.46□□□□□ -0.25
LSM2-212ENST00000477182 IL17RBQ9NRM6 502 aa13.46□□□□□ -0.25
LSM2-212ENST00000477182 TNKSO95271 1327 aa13.45□□□□□ -0.26
LSM2-212ENST00000477182 IGKV6D-41A0A0C4DH26 115 aa13.45□□□□□ -0.26
LSM2-212ENST00000477182 VWA5AO00534 786 aa13.45□□□□□ -0.26
LSM2-212ENST00000477182 SH2B2O14492 632 aaPredicted RBP13.45□□□□□ -0.26
LSM2-212ENST00000477182 ST18O60284 1047 aa13.45□□□□□ -0.26
LSM2-212ENST00000477182 IRX5P78411 483 aaPredicted RBP13.45□□□□□ -0.26
LSM2-212ENST00000477182 FGD1P98174 961 aa13.45□□□□□ -0.26
LSM2-212ENST00000477182 SART3Q15020 963 aaKnown RBP13.45□□□□□ -0.26
LSM2-212ENST00000477182 Q6ZUG5 572 aa13.45□□□□□ -0.26
LSM2-212ENST00000477182 ENAHQ8N8S7 591 aaPredicted RBP13.45□□□□□ -0.26
LSM2-212ENST00000477182 IGDCC4Q8TDY8 1250 aa13.45□□□□□ -0.26
LSM2-212ENST00000477182 CEP95Q96GE4 821 aa13.45□□□□□ -0.26
LSM2-212ENST00000477182 TMEM87BQ96K49 555 aa13.45□□□□□ -0.26
LSM2-212ENST00000477182 SENP2Q9HC62 589 aa13.45□□□□□ -0.26
LSM2-212ENST00000477182 TCP11L1Q9NUJ3 509 aa13.45□□□□□ -0.26
LSM2-212ENST00000477182 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.45□□□□□ -0.26
LSM2-212ENST00000477182 ZNF214Q9UL59 606 aaPredicted RBP13.45□□□□□ -0.26
LSM2-212ENST00000477182 DNAJC25-GNG10A0A024R161 153 aa13.44□□□□□ -0.26
LSM2-212ENST00000477182 ERICH2A1L162 156 aa13.44□□□□□ -0.26
LSM2-212ENST00000477182 DCXO43602 365 aa13.44□□□□□ -0.26
LSM2-212ENST00000477182 ZEB2O60315 1214 aa13.44□□□□□ -0.26
LSM2-212ENST00000477182 AK2P54819 239 aa13.44□□□□□ -0.26
LSM2-212ENST00000477182 ICA1Q05084 483 aa13.44□□□□□ -0.26
LSM2-212ENST00000477182 TOB2Q14106 344 aaPredicted RBP13.44□□□□□ -0.26
LSM2-212ENST00000477182 TTLL4Q14679 1199 aa13.44□□□□□ -0.26
LSM2-212ENST00000477182 WTAPQ15007 396 aa13.44□□□□□ -0.26
LSM2-212ENST00000477182 SEC23AQ15436 765 aa13.44□□□□□ -0.26
LSM2-212ENST00000477182 LEXMQ3ZCV2 418 aa13.44□□□□□ -0.26
LSM2-212ENST00000477182 RCSD1Q6JBY9 416 aa13.44□□□□□ -0.26
LSM2-212ENST00000477182 CXCL17Q6UXB2 119 aa13.44□□□□□ -0.26
LSM2-212ENST00000477182 NOL8Q76FK4 1167 aaKnown RBP13.44□□□□□ -0.26
LSM2-212ENST00000477182 SCLYQ96I15 445 aa13.44□□□□□ -0.26
LSM2-212ENST00000477182 LARP6Q9BRS8 491 aaKnown RBP13.44□□□□□ -0.26
LSM2-212ENST00000477182 MTA3Q9BTC8 594 aa13.44□□□□□ -0.26
LSM2-212ENST00000477182 UBE2ZQ9H832 354 aaPredicted RBP13.44□□□□□ -0.26
LSM2-212ENST00000477182 LY9Q9HBG7 655 aa13.44□□□□□ -0.26
LSM2-212ENST00000477182 PPP1R9AQ9ULJ8 1098 aa13.44□□□□□ -0.26
LSM2-212ENST00000477182 MCM3APO60318 1980 aa13.43□□□□□ -0.26
LSM2-212ENST00000477182 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.43□□□□□ -0.26
LSM2-212ENST00000477182 CTAGE5O15320 804 aa13.43□□□□□ -0.26
LSM2-212ENST00000477182 ADCY6O43306 1168 aa13.43□□□□□ -0.26
LSM2-212ENST00000477182 B4GALT4O60513 344 aa13.43□□□□□ -0.26
LSM2-212ENST00000477182 CD2BP2O95400 341 aaKnown RBP13.43□□□□□ -0.26
LSM2-212ENST00000477182 PUS10Q3MIT2 529 aaKnown RBP13.43□□□□□ -0.26
LSM2-212ENST00000477182 CCDC178Q5BJE1 867 aa13.43□□□□□ -0.26
LSM2-212ENST00000477182 IFIT1BQ5T764 474 aaKnown RBP13.43□□□□□ -0.26
LSM2-212ENST00000477182 BRF1Q92994 677 aa13.43□□□□□ -0.26
LSM2-212ENST00000477182 MFSD14AQ96MC6 490 aa13.43□□□□□ -0.26
LSM2-212ENST00000477182 AGBL1Q96MI9 1066 aa13.43□□□□□ -0.26
LSM2-212ENST00000477182 TEX13BQ9BXU2 312 aa13.43□□□□□ -0.26
LSM2-212ENST00000477182 AGXT2Q9BYV1 514 aa13.43□□□□□ -0.26
LSM2-212ENST00000477182 TRPV6Q9H1D0 765 aa13.43□□□□□ -0.26
LSM2-212ENST00000477182 ALDH8A1Q9H2A2 487 aaPredicted RBP13.43□□□□□ -0.26
LSM2-212ENST00000477182 KANSL2Q9H9L4 492 aa13.43□□□□□ -0.26
LSM2-212ENST00000477182 MTMR4Q9NYA4 1195 aa13.43□□□□□ -0.26
LSM2-212ENST00000477182 STX8Q9UNK0 236 aa13.43□□□□□ -0.26
LSM2-212ENST00000477182 ZNF536O15090 1300 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 LPXNO60711 386 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 SUPT20HL2P0C7V6 817 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 EEF2P13639 858 aaKnown RBP13.42□□□□□ -0.26
LSM2-212ENST00000477182 RFC2P35250 354 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 LIFRP42702 1097 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 BEX3Q00994 111 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 APOBRQ0VD83 1088 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 NFXL1Q6ZNB6 911 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 DGKHQ86XP1 1220 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 SIAH1Q8IUQ4 282 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 HERC6Q8IVU3 1022 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 LRRC47Q8N1G4 583 aaKnown RBP13.42□□□□□ -0.26
LSM2-212ENST00000477182 FBXL16Q8N461 479 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 REPS2Q8NFH8 660 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 VWCEQ96DN2 955 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 TMEM47Q9BQJ4 181 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 GOPCQ9HD26 462 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 FBXO28Q9NVF7 368 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 CLIP2Q9UDT6 1046 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 COL4A4P53420 1690 aaPredicted RBP13.42□□□□□ -0.26
LSM2-212ENST00000477182 ZNF318Q5VUA4 2279 aa13.42□□□□□ -0.26
LSM2-212ENST00000477182 CACNA1AO00555 2505 aa13.41□□□□□ -0.26
LSM2-212ENST00000477182 KLF18A0A0U1RQI7 1052 aa13.41□□□□□ -0.26
LSM2-212ENST00000477182 POTEB3A0JP26 581 aa13.41□□□□□ -0.26
LSM2-212ENST00000477182 CCDC69A6NI79 296 aa13.41□□□□□ -0.26
LSM2-212ENST00000477182 TTLL1O95922 423 aa13.41□□□□□ -0.26
LSM2-212ENST00000477182 TOP1P11387 765 aaKnown RBP13.41□□□□□ -0.26
LSM2-212ENST00000477182 NOVP48745 357 aa13.41□□□□□ -0.26
LSM2-212ENST00000477182 TNFAIP2Q03169 654 aa13.41□□□□□ -0.26
LSM2-212ENST00000477182 ANKRD1Q15327 319 aa13.41□□□□□ -0.26
LSM2-212ENST00000477182 FSCN1Q16658 493 aaKnown RBP13.41□□□□□ -0.26
LSM2-212ENST00000477182 PPP4R3BQ5MIZ7 849 aa13.41□□□□□ -0.26
LSM2-212ENST00000477182 SNRNP48Q6IEG0 339 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms