RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 DLX2Q07687 328 aaPredicted RBP18.34■□□□□ 0.53
SMG5-204ENST00000476954 EPC2Q52LR7 807 aa18.34■□□□□ 0.53
SMG5-204ENST00000476954 TIGD5Q53EQ6 642 aa18.34■□□□□ 0.53
SMG5-204ENST00000476954 SLFN13Q68D06 897 aa18.34■□□□□ 0.53
SMG5-204ENST00000476954 GDF6Q6KF10 455 aaPredicted RBP18.34■□□□□ 0.53
SMG5-204ENST00000476954 TRIM67Q6ZTA4 783 aa18.34■□□□□ 0.53
SMG5-204ENST00000476954 BMP8AQ7Z5Y6 402 aa18.34■□□□□ 0.53
SMG5-204ENST00000476954 RPAINQ86UA6 219 aa18.34■□□□□ 0.53
SMG5-204ENST00000476954 CEP95Q96GE4 821 aa18.34■□□□□ 0.53
SMG5-204ENST00000476954 ABHD14A-ACY1A0A1B0GW23 586 aa18.33■□□□□ 0.52
SMG5-204ENST00000476954 RBM47A0AV96 593 aaKnown RBP18.33■□□□□ 0.52
SMG5-204ENST00000476954 GPM6BQ13491 265 aa18.33■□□□□ 0.52
SMG5-204ENST00000476954 SMAD2Q15796 467 aaKnown RBP18.33■□□□□ 0.52
SMG5-204ENST00000476954 PTPROQ16827 1216 aa18.33■□□□□ 0.52
SMG5-204ENST00000476954 CAGE1Q8TC20 777 aa18.33■□□□□ 0.52
SMG5-204ENST00000476954 MKL1Q969V6 931 aa18.33■□□□□ 0.52
SMG5-204ENST00000476954 MKNK2Q9HBH9 465 aa18.33■□□□□ 0.52
SMG5-204ENST00000476954 MBTPS2O43462 519 aa18.32■□□□□ 0.52
SMG5-204ENST00000476954 PRDM1O75626 825 aa18.32■□□□□ 0.52
SMG5-204ENST00000476954 VCPP55072 806 aaKnown RBP18.32■□□□□ 0.52
SMG5-204ENST00000476954 MBTPS1Q14703 1052 aa18.32■□□□□ 0.52
SMG5-204ENST00000476954 TKFCQ3LXA3 575 aa18.32■□□□□ 0.52
SMG5-204ENST00000476954 GMCL1P1Q8NEA9 526 aa18.32■□□□□ 0.52
SMG5-204ENST00000476954 DDRGK1Q96HY6 314 aa18.32■□□□□ 0.52
SMG5-204ENST00000476954 BCL11AQ9H165 835 aa18.32■□□□□ 0.52
SMG5-204ENST00000476954 CTNNA3Q9UI47 895 aa18.32■□□□□ 0.52
SMG5-204ENST00000476954 A6NJR5 290 aa18.31■□□□□ 0.52
SMG5-204ENST00000476954 CKBP12277 381 aa18.31■□□□□ 0.52
SMG5-204ENST00000476954 ALDH5A1P51649 535 aaPredicted RBP18.31■□□□□ 0.52
SMG5-204ENST00000476954 BAATQ14032 418 aaPredicted RBP18.31■□□□□ 0.52
SMG5-204ENST00000476954 IKBKEQ14164 716 aa18.31■□□□□ 0.52
SMG5-204ENST00000476954 RASGRP2Q7LDG7 609 aa18.31■□□□□ 0.52
SMG5-204ENST00000476954 CCDC155Q8N6L0 562 aa18.31■□□□□ 0.52
SMG5-204ENST00000476954 SP7Q8TDD2 431 aaPredicted RBP18.31■□□□□ 0.52
SMG5-204ENST00000476954 PUS7LQ9H0K6 701 aaKnown RBP18.31■□□□□ 0.52
SMG5-204ENST00000476954 NSUN3Q9H649 340 aaKnown RBP18.31■□□□□ 0.52
SMG5-204ENST00000476954 MTMR4Q9NYA4 1195 aa18.31■□□□□ 0.52
SMG5-204ENST00000476954 INSL6Q9Y581 213 aa18.31■□□□□ 0.52
SMG5-204ENST00000476954 COL4A6Q14031 1691 aa18.31■□□□□ 0.52
SMG5-204ENST00000476954 MINDY4BA8MYZ0 360 aa18.3■□□□□ 0.52
SMG5-204ENST00000476954 H3BNC9 293 aa18.3■□□□□ 0.52
SMG5-204ENST00000476954 IPO8O15397 1037 aaKnown RBP18.3■□□□□ 0.52
SMG5-204ENST00000476954 FDX1P10109 184 aa18.3■□□□□ 0.52
SMG5-204ENST00000476954 STAT2P52630 851 aa18.3■□□□□ 0.52
SMG5-204ENST00000476954 HTRA4P83105 476 aaPredicted RBP18.3■□□□□ 0.52
SMG5-204ENST00000476954 IKQ13123 557 aaPredicted RBP18.3■□□□□ 0.52
SMG5-204ENST00000476954 TRAF7Q6Q0C0 670 aa18.3■□□□□ 0.52
SMG5-204ENST00000476954 SUGP1Q8IWZ8 645 aaKnown RBP18.3■□□□□ 0.52
SMG5-204ENST00000476954 RPAP2Q8IXW5 612 aaPredicted RBP18.3■□□□□ 0.52
SMG5-204ENST00000476954 FBXL6Q8N531 539 aa18.3■□□□□ 0.52
SMG5-204ENST00000476954 ATOH1Q92858 354 aaPredicted RBP18.3■□□□□ 0.52
SMG5-204ENST00000476954 WNT8BQ93098 351 aa18.3■□□□□ 0.52
SMG5-204ENST00000476954 PAG1Q9NWQ8 432 aa18.3■□□□□ 0.52
SMG5-204ENST00000476954 ARPP21Q9UBL0 812 aaPredicted RBP18.3■□□□□ 0.52
SMG5-204ENST00000476954 CACNA1BQ00975 2339 aa18.3■□□□□ 0.52
SMG5-204ENST00000476954 BRDTQ58F21 947 aaPredicted RBP18.29■□□□□ 0.52
SMG5-204ENST00000476954 MYOCDQ8IZQ8 938 aa18.29■□□□□ 0.52
SMG5-204ENST00000476954 STAG1Q8WVM7 1258 aa18.29■□□□□ 0.52
SMG5-204ENST00000476954 POP1Q99575 1024 aaKnown RBP18.29■□□□□ 0.52
SMG5-204ENST00000476954 PRRX2Q99811 253 aa18.29■□□□□ 0.52
SMG5-204ENST00000476954 GVINP1Q7Z2Y8 2422 aa18.29■□□□□ 0.52
SMG5-204ENST00000476954 STXBP3O00186 592 aa18.28■□□□□ 0.52
SMG5-204ENST00000476954 KPNA6O60684 536 aa18.28■□□□□ 0.52
SMG5-204ENST00000476954 GTF2F1P35269 517 aaKnown RBP eCLIP18.28■□□□□ 0.52
SMG5-204ENST00000476954 RBL2Q08999 1139 aa18.28■□□□□ 0.52
SMG5-204ENST00000476954 PPP2R5BQ15173 497 aa18.28■□□□□ 0.52
SMG5-204ENST00000476954 CTC1Q2NKJ3 1217 aa18.28■□□□□ 0.52
SMG5-204ENST00000476954 SBK1Q52WX2 424 aa18.28■□□□□ 0.52
SMG5-204ENST00000476954 KCTD1Q719H9 257 aa18.28■□□□□ 0.52
SMG5-204ENST00000476954 ASCL5Q7RTU5 278 aa18.28■□□□□ 0.52
SMG5-204ENST00000476954 BOLA2Q9H3K6 86 aa18.28■□□□□ 0.52
SMG5-204ENST00000476954 CCPG1Q9ULG6 757 aa18.28■□□□□ 0.52
SMG5-204ENST00000476954 PRR12Q9ULL5 1215 aa18.28■□□□□ 0.52
SMG5-204ENST00000476954 RALGAPA2Q2PPJ7 1873 aa18.27■□□□□ 0.52
SMG5-204ENST00000476954 LINC01565O15544 149 aa18.27■□□□□ 0.52
SMG5-204ENST00000476954 TBX10O75333 385 aa18.27■□□□□ 0.52
SMG5-204ENST00000476954 ARIH2O95376 493 aa18.27■□□□□ 0.52
SMG5-204ENST00000476954 TTLL1O95922 423 aa18.27■□□□□ 0.52
SMG5-204ENST00000476954 MCCP23508 829 aa18.27■□□□□ 0.52
SMG5-204ENST00000476954 ZXDAP98168 799 aa18.27■□□□□ 0.52
SMG5-204ENST00000476954 HYAL1Q12794 435 aa18.27■□□□□ 0.52
SMG5-204ENST00000476954 MKRN4PQ13434 485 aaPredicted RBP18.27■□□□□ 0.52
SMG5-204ENST00000476954 ZNF618Q5T7W0 954 aa18.27■□□□□ 0.52
SMG5-204ENST00000476954 FAM160B2Q86V87 743 aa18.27■□□□□ 0.52
SMG5-204ENST00000476954 TMEM192Q8IY95 271 aa18.27■□□□□ 0.52
SMG5-204ENST00000476954 RHPN1Q8TCX5 695 aa18.27■□□□□ 0.52
SMG5-204ENST00000476954 CHURC1Q8WUH1 139 aa18.27■□□□□ 0.52
SMG5-204ENST00000476954 KAT2BQ92831 832 aa18.27■□□□□ 0.52
SMG5-204ENST00000476954 RAD50Q92878 1312 aa18.26■□□□□ 0.51
SMG5-204ENST00000476954 GSG1L2A8MUP6 293 aa18.26■□□□□ 0.51
SMG5-204ENST00000476954 H0Y858 1186 aa18.26■□□□□ 0.51
SMG5-204ENST00000476954 NFIBO00712 420 aa18.26■□□□□ 0.51
SMG5-204ENST00000476954 EFCAB14O75071 495 aa18.26■□□□□ 0.51
SMG5-204ENST00000476954 LGR5O75473 907 aa18.26■□□□□ 0.51
SMG5-204ENST00000476954 RGS20O76081 388 aa18.26■□□□□ 0.51
SMG5-204ENST00000476954 UBE3CQ15386 1083 aa18.26■□□□□ 0.51
SMG5-204ENST00000476954 TRIM71Q2Q1W2 868 aaKnown RBP18.26■□□□□ 0.51
SMG5-204ENST00000476954 SLC30A10Q6XR72 485 aa18.26■□□□□ 0.51
SMG5-204ENST00000476954 SESTD1Q86VW0 696 aa18.26■□□□□ 0.51
SMG5-204ENST00000476954 FBXO11Q86XK2 927 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms