RNA–Protein interactions for RNA: ENST00000476935.5

GNAS-233, Transcript of GNAS complex locus, human

TSL 3

Gene GNAS, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GNAS-233	ENST00000476935	TMEM87B	Q96K49	555 aa		27.59	■■■□□ 2.01
GNAS-233	ENST00000476935	RMDN3	Q96TC7	470 aa		27.59	■■■□□ 2.01
GNAS-233	ENST00000476935	LY9	Q9HBG7	655 aa		27.59	■■■□□ 2.01
GNAS-233	ENST00000476935	PRC1	O43663	620 aa		27.58	■■■□□ 2.01
GNAS-233	ENST00000476935	CYTH3	O43739	400 aa		27.58	■■■□□ 2.01
GNAS-233	ENST00000476935	PPP2R5B	Q15173	497 aa		27.58	■■■□□ 2.01
GNAS-233	ENST00000476935	PIGS	Q96S52	555 aa		27.58	■■■□□ 2.01
GNAS-233	ENST00000476935	TBX21	Q9UL17	535 aa		27.58	■■■□□ 2.01
GNAS-233	ENST00000476935	OPLAH	O14841	1288 aa		27.57	■■■□□ 2
GNAS-233	ENST00000476935	TLR3	O15455	904 aa	Known RBP	27.57	■■■□□ 2
GNAS-233	ENST00000476935	CFB	P00751	764 aa		27.57	■■■□□ 2
GNAS-233	ENST00000476935	HSD17B4	P51659	736 aa		27.57	■■■□□ 2
GNAS-233	ENST00000476935	FAM126B	Q8IXS8	530 aa		27.57	■■■□□ 2
GNAS-233	ENST00000476935	ZNF654	Q8IZM8	581 aa		27.57	■■■□□ 2
GNAS-233	ENST00000476935	PNMA6F	A0A0J9YX94	578 aa		27.56	■■■□□ 2
GNAS-233	ENST00000476935	DDAH1	O94760	285 aa		27.56	■■■□□ 2
GNAS-233	ENST00000476935	CPT1A	P50416	773 aa		27.56	■■■□□ 2
GNAS-233	ENST00000476935	ITGA7	Q13683	1181 aa		27.56	■■■□□ 2
GNAS-233	ENST00000476935	TTLL4	Q14679	1199 aa		27.56	■■■□□ 2
GNAS-233	ENST00000476935	STXBP2	Q15833	593 aa		27.56	■■■□□ 2
GNAS-233	ENST00000476935	ARHGEF16	Q5VV41	709 aa		27.56	■■■□□ 2
GNAS-233	ENST00000476935	HOMER1	Q86YM7	354 aa		27.56	■■■□□ 2
GNAS-233	ENST00000476935	OR6J1	Q8NGC5	347 aa		27.56	■■■□□ 2
GNAS-233	ENST00000476935	POLR3E	Q9NVU0	708 aa		27.56	■■■□□ 2
GNAS-233	ENST00000476935	SH2B2	O14492	632 aa	Predicted RBP	27.55	■■■□□ 2
GNAS-233	ENST00000476935	CDC45	O75419	566 aa		27.55	■■■□□ 2
GNAS-233	ENST00000476935	TIMP1	P01033	207 aa		27.55	■■■□□ 2
GNAS-233	ENST00000476935	TXN	P10599	105 aa	Known RBP	27.55	■■■□□ 2
GNAS-233	ENST00000476935	KIF5B	P33176	963 aa		27.55	■■■□□ 2
GNAS-233	ENST00000476935	LIFR	P42702	1097 aa		27.55	■■■□□ 2
GNAS-233	ENST00000476935	SHH	Q15465	462 aa		27.55	■■■□□ 2
GNAS-233	ENST00000476935	BRDT	Q58F21	947 aa	Predicted RBP	27.55	■■■□□ 2
GNAS-233	ENST00000476935	RNF20	Q5VTR2	975 aa		27.55	■■■□□ 2
GNAS-233	ENST00000476935	CTCFL	Q8NI51	663 aa	Predicted RBP	27.55	■■■□□ 2
GNAS-233	ENST00000476935	GPHN	Q9NQX3	736 aa	Predicted RBP	27.55	■■■□□ 2
GNAS-233	ENST00000476935	GRIN2D	O15399	1336 aa		27.54	■■■□□ 2
GNAS-233	ENST00000476935	CD4	P01730	458 aa		27.54	■■■□□ 2
GNAS-233	ENST00000476935	SMARCA1	P28370	1054 aa		27.54	■■■□□ 2
GNAS-233	ENST00000476935	CCDC62	Q6P9F0	684 aa		27.54	■■■□□ 2
GNAS-233	ENST00000476935	PXMP2	Q9NR77	195 aa		27.54	■■■□□ 2
GNAS-233	ENST00000476935	CCDC69	A6NI79	296 aa		27.53	■■■□□ 2
GNAS-233	ENST00000476935	NFXL1	Q6ZNB6	911 aa		27.53	■■■□□ 2
GNAS-233	ENST00000476935	LZTS2	Q9BRK4	669 aa		27.53	■■■□□ 2
GNAS-233	ENST00000476935	SPZ1	Q9BXG8	430 aa		27.53	■■■□□ 2
GNAS-233	ENST00000476935		A6NJR5	290 aa		27.52	■■■□□ 2
GNAS-233	ENST00000476935	KPNA6	O60684	536 aa		27.52	■■■□□ 2
GNAS-233	ENST00000476935	EIF3J	O75822	258 aa	Known RBP	27.52	■■■□□ 2
GNAS-233	ENST00000476935	NR3C2	P08235	984 aa		27.52	■■■□□ 2
GNAS-233	ENST00000476935	GNAQ	P50148	359 aa		27.52	■■■□□ 2
GNAS-233	ENST00000476935	PURA	Q00577	322 aa	Known RBP	27.52	■■■□□ 2
GNAS-233	ENST00000476935	FPGS	Q05932	587 aa		27.52	■■■□□ 2
GNAS-233	ENST00000476935	C9orf50	Q5SZB4	431 aa		27.52	■■■□□ 2
GNAS-233	ENST00000476935	MFSD5	Q6N075	450 aa		27.52	■■■□□ 2
GNAS-233	ENST00000476935	COPS5	Q92905	334 aa		27.52	■■■□□ 2
GNAS-233	ENST00000476935	SCN10A	Q9Y5Y9	1956 aa		27.51	■■■□□ 2
GNAS-233	ENST00000476935	ARIH2	O95376	493 aa		27.51	■■□□□ 1.99
GNAS-233	ENST00000476935	EIF2AK2	P19525	551 aa	Known RBP	27.51	■■□□□ 1.99
GNAS-233	ENST00000476935	COL9A3	Q14050	684 aa	Predicted RBP	27.51	■■□□□ 1.99
GNAS-233	ENST00000476935	TSGA10IP	Q3SY00	556 aa		27.51	■■□□□ 1.99
GNAS-233	ENST00000476935	SEPT14	Q6ZU15	432 aa		27.51	■■□□□ 1.99
GNAS-233	ENST00000476935	MTG1	Q9BT17	334 aa	Predicted RBP	27.51	■■□□□ 1.99
GNAS-233	ENST00000476935	MYL10	Q9BUA6	226 aa		27.51	■■□□□ 1.99
GNAS-233	ENST00000476935	MYH7B	A7E2Y1	1941 aa		27.51	■■□□□ 1.99
GNAS-233	ENST00000476935	GCOM1	H8Y6P7	765 aa	Predicted RBP	27.5	■■□□□ 1.99
GNAS-233	ENST00000476935	MYL3	P08590	195 aa		27.5	■■□□□ 1.99
GNAS-233	ENST00000476935	POLR2M	P0CAP2	368 aa		27.5	■■□□□ 1.99
GNAS-233	ENST00000476935	CALM1	P0DP23	149 aa		27.5	■■□□□ 1.99
GNAS-233	ENST00000476935	CALM2	P0DP24	149 aa		27.5	■■□□□ 1.99
GNAS-233	ENST00000476935	CALM3	P0DP25	149 aa		27.5	■■□□□ 1.99
GNAS-233	ENST00000476935	PSMC6	P62333	389 aa		27.5	■■□□□ 1.99
GNAS-233	ENST00000476935	HOXA13	P31271	388 aa	Predicted RBP	27.49	■■□□□ 1.99
GNAS-233	ENST00000476935	EPHB4	P54760	987 aa		27.49	■■□□□ 1.99
GNAS-233	ENST00000476935	SGMS1	Q86VZ5	419 aa		27.49	■■□□□ 1.99
GNAS-233	ENST00000476935	RRP36	Q96EU6	259 aa	Known RBP	27.49	■■□□□ 1.99
GNAS-233	ENST00000476935	NEK1	Q96PY6	1258 aa		27.49	■■□□□ 1.99
GNAS-233	ENST00000476935	PDCD2L	Q9BRP1	358 aa		27.49	■■□□□ 1.99
GNAS-233	ENST00000476935	GH1	P01241	217 aa		27.48	■■□□□ 1.99
GNAS-233	ENST00000476935	SLC12A7	Q9Y666	1083 aa		27.48	■■□□□ 1.99
GNAS-233	ENST00000476935	LAMA2	P24043	3122 aa	Known RBP	27.47	■■□□□ 1.99
GNAS-233	ENST00000476935	LY6K	Q17RY6	165 aa		27.47	■■□□□ 1.99
GNAS-233	ENST00000476935	VSIG10L	Q86VR7	867 aa		27.47	■■□□□ 1.99
GNAS-233	ENST00000476935	TMEM199	Q8N511	208 aa		27.47	■■□□□ 1.99
GNAS-233	ENST00000476935	DEFB123	Q8N688	67 aa		27.47	■■□□□ 1.99
GNAS-233	ENST00000476935	PIBF1	Q8WXW3	757 aa		27.47	■■□□□ 1.99
GNAS-233	ENST00000476935	LRRC2	Q9BYS8	371 aa		27.47	■■□□□ 1.99
GNAS-233	ENST00000476935	DDX41	Q9UJV9	622 aa	Known RBP	27.47	■■□□□ 1.99
GNAS-233	ENST00000476935	B4GALT4	O60513	344 aa		27.46	■■□□□ 1.99
GNAS-233	ENST00000476935	ARHGAP1	Q07960	439 aa		27.46	■■□□□ 1.99
GNAS-233	ENST00000476935	PPIG	Q13427	754 aa	Known RBP eCLIP	27.46	■■□□□ 1.99	6e-15	■□□□□ 8.7
GNAS-233	ENST00000476935	PGM5	Q15124	567 aa		27.46	■■□□□ 1.99
GNAS-233	ENST00000476935	SRBD1	Q8N5C6	995 aa	Known RBP	27.46	■■□□□ 1.99
GNAS-233	ENST00000476935	PPP1R12C	Q9BZL4	782 aa		27.46	■■□□□ 1.99
GNAS-233	ENST00000476935	TRPV6	Q9H1D0	765 aa		27.46	■■□□□ 1.99
GNAS-233	ENST00000476935	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	27.46	■■□□□ 1.99
GNAS-233	ENST00000476935	PLEKHA8P1	O95397	391 aa		27.45	■■□□□ 1.98
GNAS-233	ENST00000476935	NEFL	P07196	543 aa		27.45	■■□□□ 1.98
GNAS-233	ENST00000476935	MYCL	P12524	364 aa	Predicted RBP	27.45	■■□□□ 1.98
GNAS-233	ENST00000476935	EXOSC10	Q01780	885 aa	Known RBP	27.45	■■□□□ 1.98
GNAS-233	ENST00000476935	KRT32	Q14532	448 aa		27.45	■■□□□ 1.98
GNAS-233	ENST00000476935	FAM109B	Q6ICB4	259 aa	Predicted RBP	27.45	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms