RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 COL20A1Q9P218 1284 aa32.69■■■□□ 2.82
VEGFA-211ENST00000476772 MKRN3Q13064 507 aaKnown RBP32.68■■■□□ 2.82
VEGFA-211ENST00000476772 MBOAT7Q96N66 472 aa32.68■■■□□ 2.82
VEGFA-211ENST00000476772 STAT3P40763 770 aa32.67■■■□□ 2.82
VEGFA-211ENST00000476772 LRSAM1Q6UWE0 723 aa32.67■■■□□ 2.82
VEGFA-211ENST00000476772 MB21D1Q8N884 522 aa32.67■■■□□ 2.82
VEGFA-211ENST00000476772 EHMT1Q9H9B1 1298 aa32.67■■■□□ 2.82
VEGFA-211ENST00000476772 CYP3A4P08684 503 aa32.66■■■□□ 2.82
VEGFA-211ENST00000476772 PABPC4Q13310 644 aaKnown RBP eCLIP32.66■■■□□ 2.826e-13■■■■■ 112.3
VEGFA-211ENST00000476772 GAS2L3Q86XJ1 694 aa32.66■■■□□ 2.82
VEGFA-211ENST00000476772 SAMD3Q8N6K7 520 aa32.66■■■□□ 2.82
VEGFA-211ENST00000476772 MAP3K20Q9NYL2 800 aaKnown RBP32.66■■■□□ 2.82
VEGFA-211ENST00000476772 BTBD7Q9P203 1132 aa32.66■■■□□ 2.82
VEGFA-211ENST00000476772 PEX10O60683 326 aa32.66■■■□□ 2.82
VEGFA-211ENST00000476772 HERVK_113P62684 666 aa32.66■■■□□ 2.82
VEGFA-211ENST00000476772 RPS6P62753 249 aaKnown RBP32.66■■■□□ 2.82
VEGFA-211ENST00000476772 TKFCQ3LXA3 575 aa32.66■■■□□ 2.82
VEGFA-211ENST00000476772 SLC30A10Q6XR72 485 aa32.66■■■□□ 2.82
VEGFA-211ENST00000476772 RBM43Q6ZSC3 357 aaKnown RBP32.66■■■□□ 2.82
VEGFA-211ENST00000476772 CKAP2LQ8IYA6 745 aa32.66■■■□□ 2.82
VEGFA-211ENST00000476772 SYTL5Q8TDW5 730 aaPredicted RBP32.66■■■□□ 2.82
VEGFA-211ENST00000476772 MS4A4AQ96JQ5 239 aa32.66■■■□□ 2.82
VEGFA-211ENST00000476772 GPBP1L1Q9HC44 474 aaPredicted RBP32.66■■■□□ 2.82
VEGFA-211ENST00000476772 CIITAP33076 1130 aa32.65■■■□□ 2.82
VEGFA-211ENST00000476772 UBXN2AP68543 259 aa32.65■■■□□ 2.82
VEGFA-211ENST00000476772 NSMFQ6X4W1 530 aa32.65■■■□□ 2.82
VEGFA-211ENST00000476772 TIGD1Q96MW7 591 aa32.65■■■□□ 2.82
VEGFA-211ENST00000476772 POLR2DO15514 142 aaKnown RBP32.64■■■□□ 2.82
VEGFA-211ENST00000476772 OSBPP22059 807 aa32.64■■■□□ 2.82
VEGFA-211ENST00000476772 TXKP42681 527 aa32.64■■■□□ 2.82
VEGFA-211ENST00000476772 GTF2A2P52657 109 aa32.64■■■□□ 2.82
VEGFA-211ENST00000476772 RNF207Q6ZRF8 634 aa32.64■■■□□ 2.82
VEGFA-211ENST00000476772 PANK2Q9BZ23 570 aa32.64■■■□□ 2.82
VEGFA-211ENST00000476772 A0A087X0B3 334 aa32.63■■■□□ 2.81
VEGFA-211ENST00000476772 FAM86B1E9PN63 330 aa32.63■■■□□ 2.81
VEGFA-211ENST00000476772 CTAGE5O15320 804 aa32.63■■■□□ 2.81
VEGFA-211ENST00000476772 FAM86B2P0C5J1 330 aa32.63■■■□□ 2.81
VEGFA-211ENST00000476772 CETPP11597 493 aa32.63■■■□□ 2.81
VEGFA-211ENST00000476772 HUNKP57058 714 aa32.63■■■□□ 2.81
VEGFA-211ENST00000476772 SPRYD7Q5W111 196 aa32.63■■■□□ 2.81
VEGFA-211ENST00000476772 PDILTQ8N807 584 aa32.63■■■□□ 2.81
VEGFA-211ENST00000476772 HAS1Q92839 578 aa32.63■■■□□ 2.81
VEGFA-211ENST00000476772 SDF4Q9BRK5 362 aa32.63■■■□□ 2.81
VEGFA-211ENST00000476772 TECP42680 631 aa32.62■■■□□ 2.81
VEGFA-211ENST00000476772 LONRF3Q496Y0 759 aa32.62■■■□□ 2.81
VEGFA-211ENST00000476772 Q4G0T1 1027 aa32.62■■■□□ 2.81
VEGFA-211ENST00000476772 PRR16Q569H4 304 aa32.62■■■□□ 2.81
VEGFA-211ENST00000476772 ACAD9Q9H845 621 aa32.62■■■□□ 2.81
VEGFA-211ENST00000476772 RPTORQ8N122 1335 aa32.62■■■□□ 2.81
VEGFA-211ENST00000476772 PP2D1A8MPX8 630 aa32.62■■■□□ 2.81
VEGFA-211ENST00000476772 CDC25AP30304 524 aa32.62■■■□□ 2.81
VEGFA-211ENST00000476772 ZNF76P36508 570 aa32.62■■■□□ 2.81
VEGFA-211ENST00000476772 LENG9Q96B70 501 aa32.62■■■□□ 2.81
VEGFA-211ENST00000476772 PAGR1Q9BTK6 254 aa32.62■■■□□ 2.81
VEGFA-211ENST00000476772 KCNMB3Q9NPA1 279 aa32.62■■■□□ 2.81
VEGFA-211ENST00000476772 CCL15-CCL14A0A0B4J2E2 113 aa32.61■■■□□ 2.81
VEGFA-211ENST00000476772 CNMDO75829 334 aa32.61■■■□□ 2.81
VEGFA-211ENST00000476772 ZBTB48P10074 688 aaPredicted RBP32.61■■■□□ 2.81
VEGFA-211ENST00000476772 BAATQ14032 418 aaPredicted RBP32.61■■■□□ 2.81
VEGFA-211ENST00000476772 CCL15Q16663 113 aa32.61■■■□□ 2.81
VEGFA-211ENST00000476772 KRBA2Q6ZNG9 492 aa32.61■■■□□ 2.81
VEGFA-211ENST00000476772 PASKQ96RG2 1323 aa32.6■■■□□ 2.81
VEGFA-211ENST00000476772 FXR2P51116 673 aaKnown RBP eCLIP32.6■■■□□ 2.816e-18■■■□□ 18.2
VEGFA-211ENST00000476772 BRI3BPQ8WY22 251 aa32.6■■■□□ 2.81
VEGFA-211ENST00000476772 GJA10Q969M2 543 aa32.6■■■□□ 2.81
VEGFA-211ENST00000476772 AK8Q96MA6 479 aa32.6■■■□□ 2.81
VEGFA-211ENST00000476772 TAAR1Q96RJ0 339 aa32.6■■■□□ 2.81
VEGFA-211ENST00000476772 SPATC1LQ9H0A9 340 aa32.6■■■□□ 2.81
VEGFA-211ENST00000476772 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP32.59■■■□□ 2.81
VEGFA-211ENST00000476772 MARCH6O60337 910 aa32.59■■■□□ 2.81
VEGFA-211ENST00000476772 TMEM266Q2M3C6 531 aa32.59■■■□□ 2.81
VEGFA-211ENST00000476772 RIOX2Q8IUF8 465 aa32.59■■■□□ 2.81
VEGFA-211ENST00000476772 IGSF22Q8N9C0 903 aa32.59■■■□□ 2.81
VEGFA-211ENST00000476772 CNNM3Q8NE01 707 aa32.59■■■□□ 2.81
VEGFA-211ENST00000476772 CYP2W1Q8TAV3 490 aa32.59■■■□□ 2.81
VEGFA-211ENST00000476772 FUCA2Q9BTY2 467 aa32.59■■■□□ 2.81
VEGFA-211ENST00000476772 SERTAD1Q9UHV2 236 aa32.59■■■□□ 2.81
VEGFA-211ENST00000476772 FRMPD4Q14CM0 1322 aa32.59■■■□□ 2.81
VEGFA-211ENST00000476772 TXLNAP40222 546 aa32.59■■■□□ 2.81
VEGFA-211ENST00000476772 CHST13Q8NET6 341 aa32.59■■■□□ 2.81
VEGFA-211ENST00000476772 DHX58Q96C10 678 aa32.59■■■□□ 2.81
VEGFA-211ENST00000476772 UIMC1Q96RL1 719 aa32.59■■■□□ 2.81
VEGFA-211ENST00000476772 TTC12Q9H892 705 aaPredicted RBP32.59■■■□□ 2.81
VEGFA-211ENST00000476772 IGLV3-22A0A075B6J6 115 aa32.58■■■□□ 2.81
VEGFA-211ENST00000476772 KIF3CO14782 793 aa32.58■■■□□ 2.81
VEGFA-211ENST00000476772 ETNPPLQ8TBG4 499 aa32.58■■■□□ 2.81
VEGFA-211ENST00000476772 A1CFQ9NQ94 594 aaKnown RBP32.58■■■□□ 2.81
VEGFA-211ENST00000476772 PNMA3Q9UL41 463 aa32.58■■■□□ 2.81
VEGFA-211ENST00000476772 RABGAP1Q9Y3P9 1069 aa32.58■■■□□ 2.81
VEGFA-211ENST00000476772 FSD2A1L4K1 749 aa32.57■■■□□ 2.8
VEGFA-211ENST00000476772 BTBD19C9JJ37 291 aa32.57■■■□□ 2.8
VEGFA-211ENST00000476772 ACTN4O43707 911 aaKnown RBP32.57■■■□□ 2.8
VEGFA-211ENST00000476772 IL31RAQ8NI17 732 aa32.57■■■□□ 2.8
VEGFA-211ENST00000476772 ERCC4Q92889 916 aaPredicted RBP32.57■■■□□ 2.8
VEGFA-211ENST00000476772 PURBQ96QR8 312 aaKnown RBP32.57■■■□□ 2.8
VEGFA-211ENST00000476772 TSPY26PQ9H489 355 aa32.57■■■□□ 2.8
VEGFA-211ENST00000476772 TXNRD2Q9NNW7 524 aa32.57■■■□□ 2.8
VEGFA-211ENST00000476772 RBPJLQ9UBG7 517 aa32.57■■■□□ 2.8
VEGFA-211ENST00000476772 GOLGA6L3A6NEY3 463 aa32.56■■■□□ 2.8
VEGFA-211ENST00000476772 UBA7P41226 1012 aa32.56■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms