RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 UNCXA6NJT0 531 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 BTBD19C9JJ37 291 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 DLL1O00548 723 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 SMARCA5O60264 1052 aaPredicted RBP9.64□□□□□ -0.87
CHD6-207ENST00000476641 FKTNO75072 461 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 ENTPD3O75355 529 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 LGR5O75473 907 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 CHGBP05060 677 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 RARAP10276 462 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 FSTP19883 344 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 SOX10P56693 466 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 MOGSQ13724 837 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 NAA16Q6N069 864 aaPredicted RBP9.64□□□□□ -0.87
CHD6-207ENST00000476641 ERO1BQ86YB8 467 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 MAPKAPK5Q8IW41 473 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 TEX11Q8IYF3 940 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 MIGA1Q8NAN2 632 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 CD99L2Q8TCZ2 262 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 IFT43Q96FT9 208 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 AKTIPQ9H8T0 292 aa9.64□□□□□ -0.87
CHD6-207ENST00000476641 IDH1O75874 414 aaKnown RBP9.63□□□□□ -0.87
CHD6-207ENST00000476641 SASH3O75995 380 aa9.63□□□□□ -0.87
CHD6-207ENST00000476641 CYP7A1P22680 504 aa9.63□□□□□ -0.87
CHD6-207ENST00000476641 SSTR4P31391 388 aa9.63□□□□□ -0.87
CHD6-207ENST00000476641 GTF2A2P52657 109 aa9.63□□□□□ -0.87
CHD6-207ENST00000476641 GSTO1P78417 241 aa9.63□□□□□ -0.87
CHD6-207ENST00000476641 PPIL2Q13356 520 aa9.63□□□□□ -0.87
CHD6-207ENST00000476641 TAF1CQ15572 869 aaPredicted RBP9.63□□□□□ -0.87
CHD6-207ENST00000476641 NOL9Q5SY16 702 aaKnown RBP9.63□□□□□ -0.87
CHD6-207ENST00000476641 HFE2Q6ZVN8 426 aa9.63□□□□□ -0.87
CHD6-207ENST00000476641 TGFBRAP1Q8WUH2 860 aa9.63□□□□□ -0.87
CHD6-207ENST00000476641 ZNF512BQ96KM6 892 aaPredicted RBP9.63□□□□□ -0.87
CHD6-207ENST00000476641 OSBPL5Q9H0X9 879 aaPredicted RBP9.63□□□□□ -0.87
CHD6-207ENST00000476641 SAP30BPQ9UHR5 308 aaKnown RBP9.63□□□□□ -0.87
CHD6-207ENST00000476641 ALX3O95076 343 aa9.62□□□□□ -0.87
CHD6-207ENST00000476641 LDHCP07864 332 aa9.62□□□□□ -0.87
CHD6-207ENST00000476641 EIF2AK2P19525 551 aaKnown RBP9.62□□□□□ -0.87
CHD6-207ENST00000476641 ARSDP51689 593 aa9.62□□□□□ -0.87
CHD6-207ENST00000476641 INHBEP58166 350 aa9.62□□□□□ -0.87
CHD6-207ENST00000476641 JAG1P78504 1218 aa9.62□□□□□ -0.87
CHD6-207ENST00000476641 SNAPC2Q13487 334 aa9.62□□□□□ -0.87
CHD6-207ENST00000476641 PDE3AQ14432 1141 aa9.62□□□□□ -0.87
CHD6-207ENST00000476641 ERC1Q8IUD2 1116 aa9.62□□□□□ -0.87
CHD6-207ENST00000476641 RPAP2Q8IXW5 612 aaPredicted RBP9.62□□□□□ -0.87
CHD6-207ENST00000476641 SCYL3Q8IZE3 742 aa9.62□□□□□ -0.87
CHD6-207ENST00000476641 MAGEB6Q8N7X4 407 aa9.62□□□□□ -0.87
CHD6-207ENST00000476641 HOOK2Q96ED9 719 aa9.62□□□□□ -0.87
CHD6-207ENST00000476641 KIF1BPQ96EK5 621 aa9.62□□□□□ -0.87
CHD6-207ENST00000476641 DNAJC2Q99543 621 aaKnown RBP9.62□□□□□ -0.87
CHD6-207ENST00000476641 ARHGAP39Q9C0H5 1083 aa9.62□□□□□ -0.87
CHD6-207ENST00000476641 TRIM17Q9Y577 477 aa9.62□□□□□ -0.87
CHD6-207ENST00000476641 FLT1P17948 1338 aa9.61□□□□□ -0.87
CHD6-207ENST00000476641 HMMRO75330 724 aa9.61□□□□□ -0.87
CHD6-207ENST00000476641 CETPP11597 493 aa9.61□□□□□ -0.87
CHD6-207ENST00000476641 PTPRAP18433 802 aa9.61□□□□□ -0.87
CHD6-207ENST00000476641 PPATQ06203 517 aa9.61□□□□□ -0.87
CHD6-207ENST00000476641 TSHZ3Q63HK5 1081 aa9.61□□□□□ -0.87
CHD6-207ENST00000476641 OTOP1Q7RTM1 612 aa9.61□□□□□ -0.87
CHD6-207ENST00000476641 DNAJC18Q9H819 358 aa9.61□□□□□ -0.87
CHD6-207ENST00000476641 CPA4Q9UI42 421 aa9.61□□□□□ -0.87
CHD6-207ENST00000476641 PALD1Q9ULE6 856 aa9.61□□□□□ -0.87
CHD6-207ENST00000476641 ZHX2Q9Y6X8 837 aa9.61□□□□□ -0.87
CHD6-207ENST00000476641 BRCA2P51587 3418 aa9.61□□□□□ -0.87
CHD6-207ENST00000476641 MKI67P46013 3256 aaKnown RBP9.6□□□□□ -0.87
CHD6-207ENST00000476641 TRIM75PA6NK02 468 aa9.6□□□□□ -0.87
CHD6-207ENST00000476641 PDHXO00330 501 aa9.6□□□□□ -0.87
CHD6-207ENST00000476641 GOLIM4O00461 696 aa9.6□□□□□ -0.87
CHD6-207ENST00000476641 PAX4O43316 350 aa9.6□□□□□ -0.87
CHD6-207ENST00000476641 IFIT2P09913 472 aaKnown RBP9.6□□□□□ -0.87
CHD6-207ENST00000476641 CYP2C8P10632 490 aa9.6□□□□□ -0.87
CHD6-207ENST00000476641 IGFBP4P22692 258 aa9.6□□□□□ -0.87
CHD6-207ENST00000476641 CTGFP29279 349 aa9.6□□□□□ -0.87
CHD6-207ENST00000476641 RRP1P56182 461 aaKnown RBP9.6□□□□□ -0.87
CHD6-207ENST00000476641 HSP90AB4PQ58FF6 505 aa9.6□□□□□ -0.87
CHD6-207ENST00000476641 NOM1Q5C9Z4 860 aaKnown RBP9.6□□□□□ -0.87
CHD6-207ENST00000476641 OTUD7BQ6GQQ9 843 aa9.6□□□□□ -0.87
CHD6-207ENST00000476641 CLASRPQ8N2M8 674 aaKnown RBP9.6□□□□□ -0.87
CHD6-207ENST00000476641 MRPL18Q9H0U6 180 aaKnown RBP9.6□□□□□ -0.87
CHD6-207ENST00000476641 BOLA2Q9H3K6 86 aa9.6□□□□□ -0.87
CHD6-207ENST00000476641 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.6□□□□□ -0.87
CHD6-207ENST00000476641 C11orf16Q9NQ32 467 aa9.6□□□□□ -0.87
CHD6-207ENST00000476641 PICK1Q9NRD5 415 aa9.6□□□□□ -0.87
CHD6-207ENST00000476641 AK9Q5TCS8 1911 aa9.6□□□□□ -0.87
CHD6-207ENST00000476641 MYO5AQ9Y4I1 1855 aaKnown RBP9.59□□□□□ -0.87
CHD6-207ENST00000476641 BAG3O95817 575 aa9.59□□□□□ -0.87
CHD6-207ENST00000476641 PDE6AP16499 860 aa9.59□□□□□ -0.87
CHD6-207ENST00000476641 NRLP54845 237 aa9.59□□□□□ -0.87
CHD6-207ENST00000476641 SP3Q02447 781 aa9.59□□□□□ -0.87
CHD6-207ENST00000476641 FBXO46Q6PJ61 603 aaPredicted RBP9.59□□□□□ -0.87
CHD6-207ENST00000476641 GADL1Q6ZQY3 521 aa9.59□□□□□ -0.87
CHD6-207ENST00000476641 CRBNQ96SW2 442 aa9.59□□□□□ -0.87
CHD6-207ENST00000476641 NOL10Q9BSC4 688 aaKnown RBP9.59□□□□□ -0.87
CHD6-207ENST00000476641 ZFYVE28Q9HCC9 887 aa9.59□□□□□ -0.87
CHD6-207ENST00000476641 AFG3L2Q9Y4W6 797 aa9.59□□□□□ -0.87
CHD6-207ENST00000476641 KIAA0100Q14667 2235 aaKnown RBP9.59□□□□□ -0.87
CHD6-207ENST00000476641 ADGRA2Q96PE1 1338 aa9.58□□□□□ -0.88
CHD6-207ENST00000476641 A0A0G2JLL6 359 aaPredicted RBP9.58□□□□□ -0.88
CHD6-207ENST00000476641 TCRBV5S4A2TA0A5A2 114 aa9.58□□□□□ -0.88
CHD6-207ENST00000476641 F8W735 103 aaPredicted RBP9.58□□□□□ -0.88
CHD6-207ENST00000476641 SMIM22K7EJ46 135 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms