RNA–Protein interactions for RNA: ENST00000476538.1

APH1A-206, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-206ENST00000476538 RMDN3Q96TC7 470 aa17.56■□□□□ 0.4
APH1A-206ENST00000476538 MAP3K14Q99558 947 aa17.56■□□□□ 0.4
APH1A-206ENST00000476538 TBX21Q9UL17 535 aa17.56■□□□□ 0.4
APH1A-206ENST00000476538 PCDHA1Q9Y5I3 950 aa17.56■□□□□ 0.4
APH1A-206ENST00000476538 SH2B2O14492 632 aaPredicted RBP17.55■□□□□ 0.4
APH1A-206ENST00000476538 NKRFO15226 690 aaKnown RBP eCLIP17.55■□□□□ 0.4
APH1A-206ENST00000476538 CFBP00751 764 aa17.55■□□□□ 0.4
APH1A-206ENST00000476538 CPT1AP50416 773 aa17.55■□□□□ 0.4
APH1A-206ENST00000476538 HSD17B4P51659 736 aa17.55■□□□□ 0.4
APH1A-206ENST00000476538 RNF20Q5VTR2 975 aa17.55■□□□□ 0.4
APH1A-206ENST00000476538 GPR153Q6NV75 609 aa17.55■□□□□ 0.4
APH1A-206ENST00000476538 OR6J1Q8NGC5 347 aa17.55■□□□□ 0.4
APH1A-206ENST00000476538 CTCFLQ8NI51 663 aaPredicted RBP17.55■□□□□ 0.4
APH1A-206ENST00000476538 IWS1Q96ST2 819 aa17.55■□□□□ 0.4
APH1A-206ENST00000476538 GPHNQ9NQX3 736 aaPredicted RBP17.55■□□□□ 0.4
APH1A-206ENST00000476538 TLR3O15455 904 aaKnown RBP17.54■□□□□ 0.4
APH1A-206ENST00000476538 KIF5BP33176 963 aa17.54■□□□□ 0.4
APH1A-206ENST00000476538 LIFRP42702 1097 aa17.54■□□□□ 0.4
APH1A-206ENST00000476538 COL9A3Q14050 684 aaPredicted RBP17.54■□□□□ 0.4
APH1A-206ENST00000476538 TTLL4Q14679 1199 aa17.54■□□□□ 0.4
APH1A-206ENST00000476538 ARHGEF16Q5VV41 709 aa17.54■□□□□ 0.4
APH1A-206ENST00000476538 SLC43A3Q8NBI5 491 aa17.54■□□□□ 0.4
APH1A-206ENST00000476538 MYL10Q9BUA6 226 aa17.54■□□□□ 0.4
APH1A-206ENST00000476538 SEZ6LQ9BYH1 1024 aa17.54■□□□□ 0.4
APH1A-206ENST00000476538 PXMP2Q9NR77 195 aa17.54■□□□□ 0.4
APH1A-206ENST00000476538 MAP3K20Q9NYL2 800 aaKnown RBP17.54■□□□□ 0.4
APH1A-206ENST00000476538 PNMA6FA0A0J9YX94 578 aa17.53■□□□□ 0.4
APH1A-206ENST00000476538 CCDC69A6NI79 296 aa17.53■□□□□ 0.4
APH1A-206ENST00000476538 TXNP10599 105 aaKnown RBP17.53■□□□□ 0.4
APH1A-206ENST00000476538 EIF2AK2P19525 551 aaKnown RBP17.53■□□□□ 0.4
APH1A-206ENST00000476538 ITGA7Q13683 1181 aa17.53■□□□□ 0.4
APH1A-206ENST00000476538 STXBP2Q15833 593 aa17.53■□□□□ 0.4
APH1A-206ENST00000476538 NFXL1Q6ZNB6 911 aa17.53■□□□□ 0.4
APH1A-206ENST00000476538 TMTC2Q8N394 836 aa17.53■□□□□ 0.4
APH1A-206ENST00000476538 SAMD3Q8N6K7 520 aa17.53■□□□□ 0.4
APH1A-206ENST00000476538 SPZ1Q9BXG8 430 aa17.53■□□□□ 0.4
APH1A-206ENST00000476538 POLR3EQ9NVU0 708 aa17.53■□□□□ 0.4
APH1A-206ENST00000476538 GRIN2DO15399 1336 aa17.52■□□□□ 0.4
APH1A-206ENST00000476538 ARIH2O95376 493 aa17.52■□□□□ 0.4
APH1A-206ENST00000476538 TIMP1P01033 207 aa17.52■□□□□ 0.4
APH1A-206ENST00000476538 CD4P01730 458 aa17.52■□□□□ 0.4
APH1A-206ENST00000476538 PSMC6P62333 389 aa17.52■□□□□ 0.4
APH1A-206ENST00000476538 PURAQ00577 322 aaKnown RBP17.52■□□□□ 0.4
APH1A-206ENST00000476538 FPGSQ05932 587 aa17.52■□□□□ 0.4
APH1A-206ENST00000476538 BRDTQ58F21 947 aaPredicted RBP17.52■□□□□ 0.4
APH1A-206ENST00000476538 C9orf50Q5SZB4 431 aa17.52■□□□□ 0.4
APH1A-206ENST00000476538 COPS5Q92905 334 aa17.52■□□□□ 0.4
APH1A-206ENST00000476538 A6NJR5 290 aa17.51■□□□□ 0.39
APH1A-206ENST00000476538 NR3C2P08235 984 aa17.51■□□□□ 0.39
APH1A-206ENST00000476538 CALM1P0DP23 149 aa17.51■□□□□ 0.39
APH1A-206ENST00000476538 CALM2P0DP24 149 aa17.51■□□□□ 0.39
APH1A-206ENST00000476538 CALM3P0DP25 149 aa17.51■□□□□ 0.39
APH1A-206ENST00000476538 SMARCA1P28370 1054 aa17.51■□□□□ 0.39
APH1A-206ENST00000476538 HOXA13P31271 388 aaPredicted RBP17.51■□□□□ 0.39
APH1A-206ENST00000476538 SHHQ15465 462 aa17.51■□□□□ 0.39
APH1A-206ENST00000476538 CCDC62Q6P9F0 684 aa17.51■□□□□ 0.39
APH1A-206ENST00000476538 SEPT14Q6ZU15 432 aa17.51■□□□□ 0.39
APH1A-206ENST00000476538 LZTS2Q9BRK4 669 aa17.51■□□□□ 0.39
APH1A-206ENST00000476538 PDCD2LQ9BRP1 358 aa17.51■□□□□ 0.39
APH1A-206ENST00000476538 KIAA1217Q5T5P2 1943 aa17.51■□□□□ 0.39
APH1A-206ENST00000476538 GCOM1H8Y6P7 765 aaPredicted RBP17.5■□□□□ 0.39
APH1A-206ENST00000476538 EIF3JO75822 258 aaKnown RBP17.5■□□□□ 0.39
APH1A-206ENST00000476538 NEFLP07196 543 aa17.5■□□□□ 0.39
APH1A-206ENST00000476538 MYL3P08590 195 aa17.5■□□□□ 0.39
APH1A-206ENST00000476538 POLR2MP0CAP2 368 aa17.5■□□□□ 0.39
APH1A-206ENST00000476538 GNAQP50148 359 aa17.5■□□□□ 0.39
APH1A-206ENST00000476538 EPHB4P54760 987 aa17.5■□□□□ 0.39
APH1A-206ENST00000476538 MFSD5Q6N075 450 aa17.5■□□□□ 0.39
APH1A-206ENST00000476538 SGMS1Q86VZ5 419 aa17.5■□□□□ 0.39
APH1A-206ENST00000476538 PIBF1Q8WXW3 757 aa17.5■□□□□ 0.39
APH1A-206ENST00000476538 RRP36Q96EU6 259 aaKnown RBP17.5■□□□□ 0.39
APH1A-206ENST00000476538 NEK1Q96PY6 1258 aa17.5■□□□□ 0.39
APH1A-206ENST00000476538 MTG1Q9BT17 334 aaPredicted RBP17.5■□□□□ 0.39
APH1A-206ENST00000476538 LRRC2Q9BYS8 371 aa17.5■□□□□ 0.39
APH1A-206ENST00000476538 SLC12A7Q9Y666 1083 aa17.5■□□□□ 0.39
APH1A-206ENST00000476538 LAMA2P24043 3122 aaKnown RBP17.49■□□□□ 0.39
APH1A-206ENST00000476538 KPNA6O60684 536 aa17.49■□□□□ 0.39
APH1A-206ENST00000476538 PLEKHA8P1O95397 391 aa17.49■□□□□ 0.39
APH1A-206ENST00000476538 GH1P01241 217 aa17.49■□□□□ 0.39
APH1A-206ENST00000476538 RXRAP19793 462 aa17.49■□□□□ 0.39
APH1A-206ENST00000476538 PGM5Q15124 567 aa17.49■□□□□ 0.39
APH1A-206ENST00000476538 LY6KQ17RY6 165 aa17.49■□□□□ 0.39
APH1A-206ENST00000476538 TSGA10IPQ3SY00 556 aa17.49■□□□□ 0.39
APH1A-206ENST00000476538 PPP1R12CQ9BZL4 782 aa17.49■□□□□ 0.39
APH1A-206ENST00000476538 SEC63Q9UGP8 760 aaKnown RBP17.49■□□□□ 0.39
APH1A-206ENST00000476538 SCN10AQ9Y5Y9 1956 aa17.48■□□□□ 0.39
APH1A-206ENST00000476538 BAZ2BQ9UIF8 2168 aaKnown RBP17.48■□□□□ 0.39
APH1A-206ENST00000476538 B4GALT4O60513 344 aa17.48■□□□□ 0.39
APH1A-206ENST00000476538 ARHGAP1Q07960 439 aa17.48■□□□□ 0.39
APH1A-206ENST00000476538 KRT32Q14532 448 aa17.48■□□□□ 0.39
APH1A-206ENST00000476538 MICU3Q86XE3 530 aa17.48■□□□□ 0.39
APH1A-206ENST00000476538 RASEFQ8IZ41 740 aa17.48■□□□□ 0.39
APH1A-206ENST00000476538 SRBD1Q8N5C6 995 aaKnown RBP17.48■□□□□ 0.39
APH1A-206ENST00000476538 ALDH8A1Q9H2A2 487 aaPredicted RBP17.48■□□□□ 0.39
APH1A-206ENST00000476538 DDX41Q9UJV9 622 aaKnown RBP17.48■□□□□ 0.39
APH1A-206ENST00000476538 MRVI1Q9Y6F6 885 aa17.48■□□□□ 0.39
APH1A-206ENST00000476538 FRMPD4Q14CM0 1322 aa17.47■□□□□ 0.39
APH1A-206ENST00000476538 MMP3P08254 477 aa17.47■□□□□ 0.39
APH1A-206ENST00000476538 MYCLP12524 364 aaPredicted RBP17.47■□□□□ 0.39
APH1A-206ENST00000476538 PPIGQ13427 754 aaKnown RBP eCLIP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms