RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 NKX2-4Q9H2Z4 354 aa15.38■□□□□ 0.05
MRPL55-228ENST00000476267 PRDM6Q9NQX0 595 aa15.38■□□□□ 0.05
MRPL55-228ENST00000476267 COL20A1Q9P218 1284 aa15.38■□□□□ 0.05
MRPL55-228ENST00000476267 KDM4AO75164 1064 aa15.37■□□□□ 0.05
MRPL55-228ENST00000476267 PFKMP08237 780 aa15.37■□□□□ 0.05
MRPL55-228ENST00000476267 MYL3P08590 195 aa15.37■□□□□ 0.05
MRPL55-228ENST00000476267 SUPT20HL2P0C7V6 817 aa15.37■□□□□ 0.05
MRPL55-228ENST00000476267 CDC37Q16543 378 aaPredicted RBP15.37■□□□□ 0.05
MRPL55-228ENST00000476267 NBPF20Q3BBV1 942 aa15.37■□□□□ 0.05
MRPL55-228ENST00000476267 USH1GQ495M9 461 aa15.37■□□□□ 0.05
MRPL55-228ENST00000476267 RPUSD2Q8IZ73 545 aaKnown RBP15.37■□□□□ 0.05
MRPL55-228ENST00000476267 ENAHQ8N8S7 591 aaPredicted RBP15.37■□□□□ 0.05
MRPL55-228ENST00000476267 GAS2L1Q99501 681 aaPredicted RBP15.37■□□□□ 0.05
MRPL55-228ENST00000476267 DSCC1Q9BVC3 393 aa15.37■□□□□ 0.05
MRPL55-228ENST00000476267 IL25Q9H293 177 aa15.37■□□□□ 0.05
MRPL55-228ENST00000476267 RWDD1Q9H446 243 aaPredicted RBP15.37■□□□□ 0.05
MRPL55-228ENST00000476267 MSRAQ9UJ68 235 aa15.37■□□□□ 0.05
MRPL55-228ENST00000476267 MYH6P13533 1939 aa15.37■□□□□ 0.05
MRPL55-228ENST00000476267 B4E1Z4 1266 aa15.36■□□□□ 0.05
MRPL55-228ENST00000476267 PITPNM1O00562 1244 aa15.36■□□□□ 0.05
MRPL55-228ENST00000476267 TXNP10599 105 aaKnown RBP15.36■□□□□ 0.05
MRPL55-228ENST00000476267 RABGGTBP53611 331 aa15.36■□□□□ 0.05
MRPL55-228ENST00000476267 PTPN11Q06124 597 aaPredicted RBP15.36■□□□□ 0.05
MRPL55-228ENST00000476267 TTLL4Q14679 1199 aa15.36■□□□□ 0.05
MRPL55-228ENST00000476267 TJAP1Q5JTD0 557 aa15.36■□□□□ 0.05
MRPL55-228ENST00000476267 CWC27Q6UX04 472 aaKnown RBP15.36■□□□□ 0.05
MRPL55-228ENST00000476267 ADGRF4Q8IZF3 695 aa15.36■□□□□ 0.05
MRPL55-228ENST00000476267 PPP1R13LQ8WUF5 828 aa15.36■□□□□ 0.05
MRPL55-228ENST00000476267 CTAGE1Q96RT6 745 aa15.36■□□□□ 0.05
MRPL55-228ENST00000476267 ZSCAN10Q96SZ4 725 aaPredicted RBP15.36■□□□□ 0.05
MRPL55-228ENST00000476267 MPHOSPH6Q99547 160 aaKnown RBP15.36■□□□□ 0.05
MRPL55-228ENST00000476267 ZSWIM5Q9P217 1185 aa15.36■□□□□ 0.05
MRPL55-228ENST00000476267 PCDHA11Q9Y5I1 949 aa15.36■□□□□ 0.05
MRPL55-228ENST00000476267 ABCB11O95342 1321 aa15.36■□□□□ 0.05
MRPL55-228ENST00000476267 RAD50Q92878 1312 aa15.36■□□□□ 0.05
MRPL55-228ENST00000476267 KPNA6O60684 536 aa15.35■□□□□ 0.05
MRPL55-228ENST00000476267 MYOGP15173 224 aa15.35■□□□□ 0.05
MRPL55-228ENST00000476267 GHRHRQ02643 423 aa15.35■□□□□ 0.05
MRPL55-228ENST00000476267 ASPRV1Q53RT3 343 aa15.35■□□□□ 0.05
MRPL55-228ENST00000476267 CCDC178Q5BJE1 867 aa15.35■□□□□ 0.05
MRPL55-228ENST00000476267 IQCA1Q86XH1 822 aa15.35■□□□□ 0.05
MRPL55-228ENST00000476267 SYTL5Q8TDW5 730 aaPredicted RBP15.35■□□□□ 0.05
MRPL55-228ENST00000476267 SYMPKQ92797 1274 aaKnown RBP15.35■□□□□ 0.05
MRPL55-228ENST00000476267 TAAR1Q96RJ0 339 aa15.35■□□□□ 0.05
MRPL55-228ENST00000476267 SLC28A3Q9HAS3 691 aa15.35■□□□□ 0.05
MRPL55-228ENST00000476267 SLC4A7Q9Y6M7 1214 aa15.35■□□□□ 0.05
MRPL55-228ENST00000476267 OPLAHO14841 1288 aa15.34■□□□□ 0.05
MRPL55-228ENST00000476267 IQCF3P0C7M6 154 aa15.34■□□□□ 0.05
MRPL55-228ENST00000476267 RFC2P35250 354 aa15.34■□□□□ 0.05
MRPL55-228ENST00000476267 ARHGAP1Q07960 439 aa15.34■□□□□ 0.05
MRPL55-228ENST00000476267 QRICH1Q2TAL8 776 aa15.34■□□□□ 0.05
MRPL55-228ENST00000476267 SESTD1Q86VW0 696 aa15.34■□□□□ 0.05
MRPL55-228ENST00000476267 KAT2BQ92831 832 aa15.34■□□□□ 0.05
MRPL55-228ENST00000476267 KAT14Q9H8E8 782 aa15.34■□□□□ 0.05
MRPL55-228ENST00000476267 JMJD4Q9H9V9 463 aa15.34■□□□□ 0.05
MRPL55-228ENST00000476267 GPHNQ9NQX3 736 aaPredicted RBP15.34■□□□□ 0.05
MRPL55-228ENST00000476267 B4DLN1 442 aa15.33■□□□□ 0.04
MRPL55-228ENST00000476267 HIP1O00291 1037 aa15.33■□□□□ 0.04
MRPL55-228ENST00000476267 MMP3P08254 477 aa15.33■□□□□ 0.04
MRPL55-228ENST00000476267 ATP2A2P16615 1042 aaKnown RBP15.33■□□□□ 0.04
MRPL55-228ENST00000476267 MRPL12P52815 198 aaKnown RBP15.33■□□□□ 0.04
MRPL55-228ENST00000476267 GPNMBQ14956 572 aa15.33■□□□□ 0.04
MRPL55-228ENST00000476267 BRDTQ58F21 947 aaPredicted RBP15.33■□□□□ 0.04
MRPL55-228ENST00000476267 DEFB128Q7Z7B8 93 aa15.33■□□□□ 0.04
MRPL55-228ENST00000476267 EXOC6Q8TAG9 804 aa15.33■□□□□ 0.04
MRPL55-228ENST00000476267 NSUN6Q8TEA1 469 aaKnown RBP15.33■□□□□ 0.04
MRPL55-228ENST00000476267 ATXN2LQ8WWM7 1075 aaKnown RBP15.33■□□□□ 0.04
MRPL55-228ENST00000476267 MTMR8Q96EF0 704 aa15.33■□□□□ 0.04
MRPL55-228ENST00000476267 DIAPH3Q9NSV4 1193 aa15.33■□□□□ 0.04
MRPL55-228ENST00000476267 COL4A4P53420 1690 aaPredicted RBP15.32■□□□□ 0.04
MRPL55-228ENST00000476267 HSD17B4P51659 736 aa15.32■□□□□ 0.04
MRPL55-228ENST00000476267 SEC23AQ15436 765 aa15.32■□□□□ 0.04
MRPL55-228ENST00000476267 IMMTQ16891 758 aaKnown RBP15.32■□□□□ 0.04
MRPL55-228ENST00000476267 LY6KQ17RY6 165 aa15.32■□□□□ 0.04
MRPL55-228ENST00000476267 FAM47CQ5HY64 1035 aa15.32■□□□□ 0.04
MRPL55-228ENST00000476267 PPP2R2DQ66LE6 453 aa15.32■□□□□ 0.04
MRPL55-228ENST00000476267 STAG2Q8N3U4 1231 aa15.32■□□□□ 0.04
MRPL55-228ENST00000476267 AFG1LQ8WV93 481 aa15.32■□□□□ 0.04
MRPL55-228ENST00000476267 EMID1Q96A84 441 aaPredicted RBP15.32■□□□□ 0.04
MRPL55-228ENST00000476267 IWS1Q96ST2 819 aa15.32■□□□□ 0.04
MRPL55-228ENST00000476267 THEGQ9P2T0 379 aa15.32■□□□□ 0.04
MRPL55-228ENST00000476267 ZBBXA8MT70 800 aa15.31■□□□□ 0.04
MRPL55-228ENST00000476267 PPP1R11O60927 126 aaPredicted RBP15.31■□□□□ 0.04
MRPL55-228ENST00000476267 ARHGEF15O94989 841 aa15.31■□□□□ 0.04
MRPL55-228ENST00000476267 GH1P01241 217 aa15.31■□□□□ 0.04
MRPL55-228ENST00000476267 PARP1P09874 1014 aaKnown RBP15.31■□□□□ 0.04
MRPL55-228ENST00000476267 POU3F3P20264 500 aaPredicted RBP15.31■□□□□ 0.04
MRPL55-228ENST00000476267 RBL2Q08999 1139 aa15.31■□□□□ 0.04
MRPL55-228ENST00000476267 STXBP2Q15833 593 aa15.31■□□□□ 0.04
MRPL55-228ENST00000476267 SLC35G1Q2M3R5 365 aa15.31■□□□□ 0.04
MRPL55-228ENST00000476267 GDF6Q6KF10 455 aaPredicted RBP15.31■□□□□ 0.04
MRPL55-228ENST00000476267 FBXO11Q86XK2 927 aa15.31■□□□□ 0.04
MRPL55-228ENST00000476267 MCF2L2Q86YR7 1114 aa15.31■□□□□ 0.04
MRPL55-228ENST00000476267 PPM1EQ8WY54 764 aa15.31■□□□□ 0.04
MRPL55-228ENST00000476267 DHX38Q92620 1227 aaKnown RBP15.31■□□□□ 0.04
MRPL55-228ENST00000476267 ASB2Q96Q27 587 aa15.31■□□□□ 0.04
MRPL55-228ENST00000476267 SLC9A7Q96T83 725 aa15.31■□□□□ 0.04
MRPL55-228ENST00000476267 RMDN3Q96TC7 470 aa15.31■□□□□ 0.04
MRPL55-228ENST00000476267 KRT23Q9C075 422 aa15.31■□□□□ 0.04
MRPL55-228ENST00000476267 PXMP2Q9NR77 195 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms