RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 NUP88Q99567 741 aaPredicted RBP17.88■□□□□ 0.45
VARS2-207ENST00000476162 DUSP9Q99956 384 aaKnown RBP17.88■□□□□ 0.45
VARS2-207ENST00000476162 KANSL2Q9H9L4 492 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 ADGRG1Q9Y653 693 aa17.88■□□□□ 0.45
VARS2-207ENST00000476162 EEF1GP26641 437 aaKnown RBP17.87■□□□□ 0.45
VARS2-207ENST00000476162 SLC1A4P43007 532 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 PDIA5Q14554 519 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 CSGALNACT2Q8N6G5 542 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 HPS3Q969F9 1004 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 NUDT12Q9BQG2 462 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 ABHD10Q9NUJ1 306 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.87■□□□□ 0.45
VARS2-207ENST00000476162 MYH4Q9Y623 1939 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 SLX4Q8IY92 1834 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 FECHP22830 423 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 MCM6Q14566 821 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 SEPT2Q15019 361 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 QRICH1Q2TAL8 776 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 SLFN13Q68D06 897 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 ANKRD40Q6AI12 368 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 SIAH1Q8IUQ4 282 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 P2RX5Q93086 422 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 CDK5RAP3Q96JB5 506 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 RAB34Q9BZG1 259 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 NYAP2Q9P242 653 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 MAGEC2Q9UBF1 373 aaPredicted RBP17.87■□□□□ 0.45
VARS2-207ENST00000476162 DDX25Q9UHL0 483 aaKnown RBP17.87■□□□□ 0.45
VARS2-207ENST00000476162 SERPINA10Q9UK55 444 aa17.87■□□□□ 0.45
VARS2-207ENST00000476162 LGALS16A8MUM7 142 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 PES1O00541 588 aaKnown RBP17.86■□□□□ 0.45
VARS2-207ENST00000476162 CCNE1P24864 410 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 CASQ1P31415 396 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 TATDN1Q6P1N9 297 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 MB21D1Q8N884 522 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 GJA10Q969M2 543 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 STK17AQ9UEE5 414 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 A0A0U1RQJ8 604 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 MYMKA6NI61 221 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 USP17L15C9J2P7 530 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 USP17L13C9JLJ4 530 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 USP17L11C9JVI0 530 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 USP17L18D6R9N7 530 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 USP17L22D6RA61 530 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 USP17L17D6RBQ6 530 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 USP17L19D6RCP7 530 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 USP17L20D6RJB6 530 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 USP17L24Q0WX57 530 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 TRIM14Q14142 442 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 ERCC6LQ2NKX8 1250 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 USP17L6PQ6QN14 398 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 KIAA0895Q8NCT3 520 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 SNX29Q8TEQ0 813 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 C7orf43Q8WVR3 580 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 ATRIPQ8WXE1 791 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 LARP4BQ92615 738 aaKnown RBP17.86■□□□□ 0.45
VARS2-207ENST00000476162 HAS1Q92839 578 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 CNKSR1Q969H4 720 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 TDRD3Q9H7E2 651 aaKnown RBP17.86■□□□□ 0.45
VARS2-207ENST00000476162 ZNF446Q9NWS9 450 aa17.86■□□□□ 0.45
VARS2-207ENST00000476162 SIPA1L1O43166 1804 aa17.85■□□□□ 0.45
VARS2-207ENST00000476162 GDF11O95390 407 aa17.85■□□□□ 0.45
VARS2-207ENST00000476162 KRT9P35527 623 aa17.85■□□□□ 0.45
VARS2-207ENST00000476162 ERVK-24P63145 666 aa17.85■□□□□ 0.45
VARS2-207ENST00000476162 KRT79Q5XKE5 535 aa17.85■□□□□ 0.45
VARS2-207ENST00000476162 CNNM4Q6P4Q7 775 aa17.85■□□□□ 0.45
VARS2-207ENST00000476162 ZNF507Q8TCN5 953 aa17.85■□□□□ 0.45
VARS2-207ENST00000476162 NOC3LQ8WTT2 800 aaKnown RBP17.85■□□□□ 0.45
VARS2-207ENST00000476162 DCAF4Q8WV16 495 aa17.85■□□□□ 0.45
VARS2-207ENST00000476162 IRX2Q9BZI1 471 aaPredicted RBP17.85■□□□□ 0.45
VARS2-207ENST00000476162 LZTFL1Q9NQ48 299 aa17.85■□□□□ 0.45
VARS2-207ENST00000476162 ATF5Q9Y2D1 282 aaPredicted RBP17.85■□□□□ 0.45
VARS2-207ENST00000476162 PCDHA1Q9Y5I3 950 aa17.85■□□□□ 0.45
VARS2-207ENST00000476162 BICDL2A1A5D9 508 aa17.84■□□□□ 0.45
VARS2-207ENST00000476162 NPM3O75607 178 aaKnown RBP17.84■□□□□ 0.45
VARS2-207ENST00000476162 ICA1Q05084 483 aa17.84■□□□□ 0.45
VARS2-207ENST00000476162 DYMQ7RTS9 669 aa17.84■□□□□ 0.45
VARS2-207ENST00000476162 TMTC1Q8IUR5 882 aa17.84■□□□□ 0.45
VARS2-207ENST00000476162 SLC39A2Q9NP94 309 aa17.84■□□□□ 0.45
VARS2-207ENST00000476162 GEMIN8Q9NWZ8 242 aaKnown RBP17.84■□□□□ 0.45
VARS2-207ENST00000476162 CDC37Q16543 378 aaPredicted RBP17.84■□□□□ 0.45
VARS2-207ENST00000476162 KCNK18Q7Z418 384 aa17.84■□□□□ 0.45
VARS2-207ENST00000476162 RAD54LQ92698 747 aa17.84■□□□□ 0.45
VARS2-207ENST00000476162 KIFC2Q96AC6 838 aa17.84■□□□□ 0.45
VARS2-207ENST00000476162 TUBGCP2Q9BSJ2 902 aa17.84■□□□□ 0.45
VARS2-207ENST00000476162 A0A1W2PQC6 194 aa17.83■□□□□ 0.45
VARS2-207ENST00000476162 B4DLN1 442 aa17.83■□□□□ 0.45
VARS2-207ENST00000476162 F5H6K3 240 aa17.83■□□□□ 0.45
VARS2-207ENST00000476162 MARCH6O60337 910 aa17.83■□□□□ 0.45
VARS2-207ENST00000476162 PPP1R2P41236 205 aa17.83■□□□□ 0.45
VARS2-207ENST00000476162 NOP2P46087 812 aaKnown RBP17.83■□□□□ 0.45
VARS2-207ENST00000476162 KLRC3Q07444 240 aa17.83■□□□□ 0.45
VARS2-207ENST00000476162 BMS1Q14692 1282 aaKnown RBP17.83■□□□□ 0.45
VARS2-207ENST00000476162 ECM1Q16610 540 aa17.83■□□□□ 0.45
VARS2-207ENST00000476162 TMEM179Q6ZVK1 233 aa17.83■□□□□ 0.45
VARS2-207ENST00000476162 ZBTB9Q96C00 473 aa17.83■□□□□ 0.45
VARS2-207ENST00000476162 TTC26A0AVF1 554 aa17.83■□□□□ 0.44
VARS2-207ENST00000476162 GCFC2P16383 781 aaKnown RBP17.83■□□□□ 0.44
VARS2-207ENST00000476162 ABCB5Q2M3G0 1257 aa17.83■□□□□ 0.44
VARS2-207ENST00000476162 TMEM119Q4V9L6 283 aa17.83■□□□□ 0.44
VARS2-207ENST00000476162 CYP26C1Q6V0L0 522 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms