RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 KANSL2Q9H9L4 492 aa18.63■□□□□ 0.57
TVP23B-202ENST00000476139 ABHD10Q9NUJ1 306 aa18.63■□□□□ 0.57
TVP23B-202ENST00000476139 CCDC175P0C221 793 aa18.63■□□□□ 0.57
TVP23B-202ENST00000476139 SV2BQ7L1I2 683 aa18.63■□□□□ 0.57
TVP23B-202ENST00000476139 MAGEF1Q9HAY2 307 aa18.63■□□□□ 0.57
TVP23B-202ENST00000476139 YDJCA8MPS7 323 aa18.62■□□□□ 0.57
TVP23B-202ENST00000476139 TAL1P17542 331 aaPredicted RBP18.62■□□□□ 0.57
TVP23B-202ENST00000476139 AMPD3Q01432 767 aa18.62■□□□□ 0.57
TVP23B-202ENST00000476139 PPP4R3AQ6IN85 833 aa18.62■□□□□ 0.57
TVP23B-202ENST00000476139 SNX29Q8TEQ0 813 aa18.62■□□□□ 0.57
TVP23B-202ENST00000476139 MKL1Q969V6 931 aa18.62■□□□□ 0.57
TVP23B-202ENST00000476139 TRIM34Q9BYJ4 488 aa18.62■□□□□ 0.57
TVP23B-202ENST00000476139 B4DLN1 442 aa18.62■□□□□ 0.57
TVP23B-202ENST00000476139 C21orf2O43822 256 aa18.62■□□□□ 0.57
TVP23B-202ENST00000476139 KRT9P35527 623 aa18.62■□□□□ 0.57
TVP23B-202ENST00000476139 RRP1BQ14684 758 aaKnown RBP18.62■□□□□ 0.57
TVP23B-202ENST00000476139 TMEM266Q2M3C6 531 aa18.62■□□□□ 0.57
TVP23B-202ENST00000476139 TATDN1Q6P1N9 297 aa18.62■□□□□ 0.57
TVP23B-202ENST00000476139 MB21D1Q8N884 522 aa18.62■□□□□ 0.57
TVP23B-202ENST00000476139 LARP4BQ92615 738 aaKnown RBP18.62■□□□□ 0.57
TVP23B-202ENST00000476139 P2RX5Q93086 422 aa18.62■□□□□ 0.57
TVP23B-202ENST00000476139 DHTKD1Q96HY7 919 aaPredicted RBP18.62■□□□□ 0.57
TVP23B-202ENST00000476139 CDK5RAP3Q96JB5 506 aa18.62■□□□□ 0.57
TVP23B-202ENST00000476139 TTC26A0AVF1 554 aa18.61■□□□□ 0.57
TVP23B-202ENST00000476139 F5H6K3 240 aa18.61■□□□□ 0.57
TVP23B-202ENST00000476139 ICA1Q05084 483 aa18.61■□□□□ 0.57
TVP23B-202ENST00000476139 KLRC3Q07444 240 aa18.61■□□□□ 0.57
TVP23B-202ENST00000476139 ORC2Q13416 577 aaPredicted RBP18.61■□□□□ 0.57
TVP23B-202ENST00000476139 PDIA5Q14554 519 aa18.61■□□□□ 0.57
TVP23B-202ENST00000476139 ACRBPQ8NEB7 543 aa18.61■□□□□ 0.57
TVP23B-202ENST00000476139 ZNF507Q8TCN5 953 aa18.61■□□□□ 0.57
TVP23B-202ENST00000476139 NAA15Q9BXJ9 866 aaKnown RBP18.61■□□□□ 0.57
TVP23B-202ENST00000476139 THAP9Q9H5L6 903 aa18.61■□□□□ 0.57
TVP23B-202ENST00000476139 SERPINA10Q9UK55 444 aa18.61■□□□□ 0.57
TVP23B-202ENST00000476139 SEC31AO94979 1220 aaKnown RBP18.61■□□□□ 0.57
TVP23B-202ENST00000476139 CDC37Q16543 378 aaPredicted RBP18.61■□□□□ 0.57
TVP23B-202ENST00000476139 KRT222Q8N1A0 295 aa18.61■□□□□ 0.57
TVP23B-202ENST00000476139 CHP1Q99653 195 aa18.61■□□□□ 0.57
TVP23B-202ENST00000476139 SEMA6BQ9H3T3 888 aa18.61■□□□□ 0.57
TVP23B-202ENST00000476139 NYAP2Q9P242 653 aa18.61■□□□□ 0.57
TVP23B-202ENST00000476139 TPM1P09493 284 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 CCNE1P24864 410 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 EZH2Q15910 746 aaKnown RBP18.6■□□□□ 0.57
TVP23B-202ENST00000476139 PPP1R18Q6NYC8 613 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 P2RX7Q99572 595 aaKnown RBP18.6■□□□□ 0.57
TVP23B-202ENST00000476139 TUBGCP2Q9BSJ2 902 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 ATF5Q9Y2D1 282 aaPredicted RBP18.6■□□□□ 0.57
TVP23B-202ENST00000476139 LGALS16A8MUM7 142 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 MARCH6O60337 910 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 H2AFXP16104 143 aaPredicted RBP18.6■□□□□ 0.57
TVP23B-202ENST00000476139 EEF1GP26641 437 aaKnown RBP18.6■□□□□ 0.57
TVP23B-202ENST00000476139 KLK7P49862 253 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 HDLBPQ00341 1268 aaKnown RBP18.6■□□□□ 0.57
TVP23B-202ENST00000476139 TEX35Q5T0J7 233 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 KRT79Q5XKE5 535 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 GLIS3Q8NEA6 775 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 KIFC2Q96AC6 838 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 PCDHA12Q9UN75 941 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 GOLGA6L9A6NEM1 432 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 IDEP14735 1019 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 EN1Q05925 392 aaPredicted RBP18.6■□□□□ 0.57
TVP23B-202ENST00000476139 ABCB5Q2M3G0 1257 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 ZNF771Q7L3S4 317 aaPredicted RBP18.6■□□□□ 0.57
TVP23B-202ENST00000476139 SPICE1Q8N0Z3 855 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 CNKSR1Q969H4 720 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 MAGEC2Q9UBF1 373 aaPredicted RBP18.6■□□□□ 0.57
TVP23B-202ENST00000476139 MYH4Q9Y623 1939 aa18.6■□□□□ 0.57
TVP23B-202ENST00000476139 GH2P01242 217 aa18.59■□□□□ 0.57
TVP23B-202ENST00000476139 ERCC3P19447 782 aa18.59■□□□□ 0.57
TVP23B-202ENST00000476139 RXRBP28702 533 aa18.59■□□□□ 0.57
TVP23B-202ENST00000476139 FKBP1AP62942 108 aaKnown RBP18.59■□□□□ 0.57
TVP23B-202ENST00000476139 USH1GQ495M9 461 aa18.59■□□□□ 0.57
TVP23B-202ENST00000476139 DDX12PQ92771 950 aa18.59■□□□□ 0.57
TVP23B-202ENST00000476139 CCDC47Q96A33 483 aaKnown RBP18.59■□□□□ 0.57
TVP23B-202ENST00000476139 RAB34Q9BZG1 259 aa18.59■□□□□ 0.57
TVP23B-202ENST00000476139 PPIP5K2O43314 1243 aa18.59■□□□□ 0.57
TVP23B-202ENST00000476139 TADA3O75528 432 aa18.59■□□□□ 0.57
TVP23B-202ENST00000476139 TFRCP02786 760 aaKnown RBP18.59■□□□□ 0.57
TVP23B-202ENST00000476139 RAD54LQ92698 747 aa18.59■□□□□ 0.57
TVP23B-202ENST00000476139 MEIS2O14770 477 aa18.58■□□□□ 0.57
TVP23B-202ENST00000476139 SLC15A2Q16348 729 aa18.58■□□□□ 0.57
TVP23B-202ENST00000476139 CNNM4Q6P4Q7 775 aa18.58■□□□□ 0.57
TVP23B-202ENST00000476139 A0A1W2PRG0 241 aa18.58■□□□□ 0.56
TVP23B-202ENST00000476139 SIPA1L1O43166 1804 aa18.58■□□□□ 0.56
TVP23B-202ENST00000476139 FECHP22830 423 aa18.58■□□□□ 0.56
TVP23B-202ENST00000476139 IKQ13123 557 aaPredicted RBP18.58■□□□□ 0.56
TVP23B-202ENST00000476139 LRRC41Q15345 812 aa18.58■□□□□ 0.56
TVP23B-202ENST00000476139 TMEM179Q6ZVK1 233 aa18.58■□□□□ 0.56
TVP23B-202ENST00000476139 CCDC51Q96ER9 411 aa18.58■□□□□ 0.56
TVP23B-202ENST00000476139 CNOT6LQ96LI5 555 aaKnown RBP18.58■□□□□ 0.56
TVP23B-202ENST00000476139 CSRNP1Q96S65 589 aa18.58■□□□□ 0.56
TVP23B-202ENST00000476139 GTPBP4Q9BZE4 634 aaKnown RBP18.58■□□□□ 0.56
TVP23B-202ENST00000476139 AGPAT5Q9NUQ2 364 aa18.58■□□□□ 0.56
TVP23B-202ENST00000476139 STK17AQ9UEE5 414 aa18.58■□□□□ 0.56
TVP23B-202ENST00000476139 NDUFB10O96000 172 aa18.57■□□□□ 0.56
TVP23B-202ENST00000476139 TMTC1Q8IUR5 882 aa18.57■□□□□ 0.56
TVP23B-202ENST00000476139 DCAF4Q8WV16 495 aa18.57■□□□□ 0.56
TVP23B-202ENST00000476139 GREB1LQ9C091 1923 aaPredicted RBP18.57■□□□□ 0.56
TVP23B-202ENST00000476139 RASSF10A6NK89 507 aa18.57■□□□□ 0.56
TVP23B-202ENST00000476139 TCP10L2B9ZVM9 353 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms