RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 ADD1P35611 737 aaKnown RBP16.64■□□□□ 0.25
ABCF3-211ENST00000475728 FUT2Q10981 343 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 TOB2Q14106 344 aaPredicted RBP16.64■□□□□ 0.25
ABCF3-211ENST00000475728 C8orf34Q49A92 452 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 GJC2Q5T442 439 aaPredicted RBP16.64■□□□□ 0.25
ABCF3-211ENST00000475728 TAPT1Q6NXT6 567 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 CPLX2Q6PUV4 134 aaKnown RBP16.64■□□□□ 0.25
ABCF3-211ENST00000475728 EEPD1Q7L9B9 569 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 HEATR3Q7Z4Q2 680 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 SLC17A8Q8NDX2 589 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 SMARCC2Q8TAQ2 1214 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 SCFD2Q8WU76 684 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 DPF3Q92784 378 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 AP5M1Q9H0R1 490 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 GLT8D2Q9H1C3 349 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 PSTPIP2Q9H939 334 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 FAM217BQ9NTX9 383 aaPredicted RBP16.64■□□□□ 0.25
ABCF3-211ENST00000475728 COL20A1Q9P218 1284 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 NR2E3Q9Y5X4 410 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 V9GY48 417 aaPredicted RBP16.64■□□□□ 0.25
ABCF3-211ENST00000475728 MYH6P13533 1939 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 SYNRGQ9UMZ2 1314 aa16.64■□□□□ 0.25
ABCF3-211ENST00000475728 RBM47A0AV96 593 aaKnown RBP16.63■□□□□ 0.25
ABCF3-211ENST00000475728 NKRFO15226 690 aaKnown RBP eCLIP16.63■□□□□ 0.25
ABCF3-211ENST00000475728 EIF3JO75822 258 aaKnown RBP16.63■□□□□ 0.25
ABCF3-211ENST00000475728 PGK1P00558 417 aa16.63■□□□□ 0.25
ABCF3-211ENST00000475728 NR3C2P08235 984 aa16.63■□□□□ 0.25
ABCF3-211ENST00000475728 EIF2AK2P19525 551 aaKnown RBP16.63■□□□□ 0.25
ABCF3-211ENST00000475728 CST5P28325 142 aaPredicted RBP16.63■□□□□ 0.25
ABCF3-211ENST00000475728 HOXA13P31271 388 aaPredicted RBP16.63■□□□□ 0.25
ABCF3-211ENST00000475728 ADCYAP1R1P41586 468 aa16.63■□□□□ 0.25
ABCF3-211ENST00000475728 GJA9P57773 515 aa16.63■□□□□ 0.25
ABCF3-211ENST00000475728 PCSK9Q8NBP7 692 aaKnown RBP16.63■□□□□ 0.25
ABCF3-211ENST00000475728 WDR11Q9BZH6 1224 aa16.63■□□□□ 0.25
ABCF3-211ENST00000475728 UPF3AQ9H1J1 476 aaKnown RBP16.63■□□□□ 0.25
ABCF3-211ENST00000475728 UPF2Q9HAU5 1272 aaKnown RBP16.63■□□□□ 0.25
ABCF3-211ENST00000475728 BAZ2BQ9UIF8 2168 aaKnown RBP16.62■□□□□ 0.25
ABCF3-211ENST00000475728 hCG_1642624A0A1W2PR95 340 aa16.62■□□□□ 0.25
ABCF3-211ENST00000475728 MOXD2PA6NHM9 499 aa16.62■□□□□ 0.25
ABCF3-211ENST00000475728 H0YGN5 161 aa16.62■□□□□ 0.25
ABCF3-211ENST00000475728 CPLX1O14810 134 aa16.62■□□□□ 0.25
ABCF3-211ENST00000475728 ADAMTS4O75173 837 aa16.62■□□□□ 0.25
ABCF3-211ENST00000475728 SEC24BO95487 1268 aa16.62■□□□□ 0.25
ABCF3-211ENST00000475728 C6orf222P0C671 652 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-211ENST00000475728 IFNAR1P17181 557 aa16.62■□□□□ 0.25
ABCF3-211ENST00000475728 CCND2P30279 289 aa16.62■□□□□ 0.25
ABCF3-211ENST00000475728 NAPAP54920 295 aa16.62■□□□□ 0.25
ABCF3-211ENST00000475728 NKX3-2P78367 333 aa16.62■□□□□ 0.25
ABCF3-211ENST00000475728 TTLL4Q14679 1199 aa16.62■□□□□ 0.25
ABCF3-211ENST00000475728 DUSP28Q4G0W2 176 aa16.62■□□□□ 0.25
ABCF3-211ENST00000475728 BRDTQ58F21 947 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-211ENST00000475728 FCHSD1Q86WN1 690 aa16.62■□□□□ 0.25
ABCF3-211ENST00000475728 TRIM22Q8IYM9 498 aa16.62■□□□□ 0.25
ABCF3-211ENST00000475728 CCDC12Q8WUD4 166 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-211ENST00000475728 PDCD2LQ9BRP1 358 aa16.62■□□□□ 0.25
ABCF3-211ENST00000475728 SENP6Q9GZR1 1112 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-211ENST00000475728 PHF24Q9UPV7 400 aa16.62■□□□□ 0.25
ABCF3-211ENST00000475728 PRPF3O43395 683 aaKnown RBP16.61■□□□□ 0.25
ABCF3-211ENST00000475728 ZEB2O60315 1214 aa16.61■□□□□ 0.25
ABCF3-211ENST00000475728 EVI5O60447 810 aa16.61■□□□□ 0.25
ABCF3-211ENST00000475728 STAM2O75886 525 aa16.61■□□□□ 0.25
ABCF3-211ENST00000475728 SMPD1P17405 629 aa16.61■□□□□ 0.25
ABCF3-211ENST00000475728 GNASQ5JWF2 1037 aa16.61■□□□□ 0.25
ABCF3-211ENST00000475728 WWC2Q6AWC2 1192 aa16.61■□□□□ 0.25
ABCF3-211ENST00000475728 XRRA1Q6P2D8 792 aa16.61■□□□□ 0.25
ABCF3-211ENST00000475728 TLK2Q86UE8 772 aa16.61■□□□□ 0.25
ABCF3-211ENST00000475728 KLHDC9Q8NEP7 349 aa16.61■□□□□ 0.25
ABCF3-211ENST00000475728 GPKOWQ92917 476 aaPredicted RBP eCLIP16.61■□□□□ 0.25
ABCF3-211ENST00000475728 LENG1Q96BZ8 264 aaPredicted RBP16.61■□□□□ 0.25
ABCF3-211ENST00000475728 RNF26Q9BY78 433 aaPredicted RBP16.61■□□□□ 0.25
ABCF3-211ENST00000475728 EHMT1Q9H9B1 1298 aa16.61■□□□□ 0.25
ABCF3-211ENST00000475728 PDGFCQ9NRA1 345 aa16.61■□□□□ 0.25
ABCF3-211ENST00000475728 BARHL2Q9NY43 387 aa16.61■□□□□ 0.25
ABCF3-211ENST00000475728 GNEQ9Y223 722 aaKnown RBP16.61■□□□□ 0.25
ABCF3-211ENST00000475728 DDX49Q9Y6V7 483 aaKnown RBP16.61■□□□□ 0.25
ABCF3-211ENST00000475728 SPDYE3A6NKU9 549 aa16.6■□□□□ 0.25
ABCF3-211ENST00000475728 DYNC1LI2O43237 492 aaPredicted RBP16.6■□□□□ 0.25
ABCF3-211ENST00000475728 CDKL5O76039 1030 aa16.6■□□□□ 0.25
ABCF3-211ENST00000475728 SCG2P13521 617 aa16.6■□□□□ 0.25
ABCF3-211ENST00000475728 ADCY7P51828 1080 aa16.6■□□□□ 0.25
ABCF3-211ENST00000475728 CCT2P78371 535 aaKnown RBP16.6■□□□□ 0.25
ABCF3-211ENST00000475728 PGM5Q15124 567 aa16.6■□□□□ 0.25
ABCF3-211ENST00000475728 PFKFB3Q16875 520 aaPredicted RBP16.6■□□□□ 0.25
ABCF3-211ENST00000475728 KCNV1Q6PIU1 500 aa16.6■□□□□ 0.25
ABCF3-211ENST00000475728 VSIG10LQ86VR7 867 aa16.6■□□□□ 0.25
ABCF3-211ENST00000475728 SLKQ9H2G2 1235 aaPredicted RBP16.6■□□□□ 0.25
ABCF3-211ENST00000475728 FRMPD4Q14CM0 1322 aa16.6■□□□□ 0.25
ABCF3-211ENST00000475728 LCTP09848 1927 aa16.6■□□□□ 0.25
ABCF3-211ENST00000475728 CEP290O15078 2479 aa16.59■□□□□ 0.25
ABCF3-211ENST00000475728 FRMPD3Q5JV73 1810 aa16.59■□□□□ 0.25
ABCF3-211ENST00000475728 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.59■□□□□ 0.25
ABCF3-211ENST00000475728 MEIS2O14770 477 aa16.59■□□□□ 0.25
ABCF3-211ENST00000475728 ADCY6O43306 1168 aa16.59■□□□□ 0.25
ABCF3-211ENST00000475728 CABYRO75952 493 aa16.59■□□□□ 0.25
ABCF3-211ENST00000475728 TXNP10599 105 aaKnown RBP16.59■□□□□ 0.25
ABCF3-211ENST00000475728 MYCLP12524 364 aaPredicted RBP16.59■□□□□ 0.25
ABCF3-211ENST00000475728 NEK4P51957 841 aa16.59■□□□□ 0.25
ABCF3-211ENST00000475728 ACLYP53396 1101 aa16.59■□□□□ 0.25
ABCF3-211ENST00000475728 FSCN1Q16658 493 aaKnown RBP16.59■□□□□ 0.25
ABCF3-211ENST00000475728 GNPTABQ3T906 1256 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms