RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 EPG5Q9HCE0 2579 aa16.75■□□□□ 0.27
ATG9A-220ENST00000475339 ZNF532Q9HCE3 1301 aa16.74■□□□□ 0.27
ATG9A-220ENST00000475339 DMDP11532 3685 aa16.74■□□□□ 0.27
ATG9A-220ENST00000475339 GVINP1Q7Z2Y8 2422 aa16.74■□□□□ 0.27
ATG9A-220ENST00000475339 ABHD14A-ACY1A0A1B0GW23 586 aa16.74■□□□□ 0.27
ATG9A-220ENST00000475339 MBTPS2O43462 519 aa16.74■□□□□ 0.27
ATG9A-220ENST00000475339 NBNO60934 754 aa16.74■□□□□ 0.27
ATG9A-220ENST00000475339 KRT37O76014 449 aa16.74■□□□□ 0.27
ATG9A-220ENST00000475339 CPT1AP50416 773 aa16.74■□□□□ 0.27
ATG9A-220ENST00000475339 RPAINQ86UA6 219 aa16.74■□□□□ 0.27
ATG9A-220ENST00000475339 AFAP1L1Q8TED9 768 aa16.74■□□□□ 0.27
ATG9A-220ENST00000475339 ARMT1Q9H993 441 aa16.74■□□□□ 0.27
ATG9A-220ENST00000475339 VTA1Q9NP79 307 aa16.74■□□□□ 0.27
ATG9A-220ENST00000475339 INSL6Q9Y581 213 aa16.74■□□□□ 0.27
ATG9A-220ENST00000475339 SCN10AQ9Y5Y9 1956 aa16.74■□□□□ 0.27
ATG9A-220ENST00000475339 KMT2EQ8IZD2 1858 aa16.73■□□□□ 0.27
ATG9A-220ENST00000475339 PROB1E7EW31 1015 aa16.73■□□□□ 0.27
ATG9A-220ENST00000475339 STXBP3O00186 592 aa16.73■□□□□ 0.27
ATG9A-220ENST00000475339 CXCL10P02778 98 aa16.73■□□□□ 0.27
ATG9A-220ENST00000475339 SELPP16109 830 aa16.73■□□□□ 0.27
ATG9A-220ENST00000475339 CHMP4BP1P59074 171 aa16.73■□□□□ 0.27
ATG9A-220ENST00000475339 ZXDAP98168 799 aa16.73■□□□□ 0.27
ATG9A-220ENST00000475339 GPM6BQ13491 265 aa16.73■□□□□ 0.27
ATG9A-220ENST00000475339 PTGISQ16647 500 aa16.73■□□□□ 0.27
ATG9A-220ENST00000475339 LRRC8DQ7L1W4 858 aa16.73■□□□□ 0.27
ATG9A-220ENST00000475339 PURBQ96QR8 312 aaKnown RBP16.73■□□□□ 0.27
ATG9A-220ENST00000475339 FSD1Q9BTV5 496 aa16.73■□□□□ 0.27
ATG9A-220ENST00000475339 WDR11Q9BZH6 1224 aa16.73■□□□□ 0.27
ATG9A-220ENST00000475339 DCTPP1Q9H773 170 aa16.73■□□□□ 0.27
ATG9A-220ENST00000475339 RNF146Q9NTX7 359 aa16.73■□□□□ 0.27
ATG9A-220ENST00000475339 TRPC6Q9Y210 931 aa16.73■□□□□ 0.27
ATG9A-220ENST00000475339 PLXNA3P51805 1871 aa16.73■□□□□ 0.27
ATG9A-220ENST00000475339 H3BNC9 293 aa16.72■□□□□ 0.27
ATG9A-220ENST00000475339 RGS20O76081 388 aa16.72■□□□□ 0.27
ATG9A-220ENST00000475339 AVPR2P30518 371 aa16.72■□□□□ 0.27
ATG9A-220ENST00000475339 PTPN11Q06124 597 aaPredicted RBP16.72■□□□□ 0.27
ATG9A-220ENST00000475339 CTC1Q2NKJ3 1217 aa16.72■□□□□ 0.27
ATG9A-220ENST00000475339 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.72■□□□□ 0.27
ATG9A-220ENST00000475339 OR6J1Q8NGC5 347 aa16.72■□□□□ 0.27
ATG9A-220ENST00000475339 CAGE1Q8TC20 777 aa16.72■□□□□ 0.27
ATG9A-220ENST00000475339 CTAGE1Q96RT6 745 aa16.72■□□□□ 0.27
ATG9A-220ENST00000475339 ZBTB47Q9UFB7 747 aaPredicted RBP16.72■□□□□ 0.27
ATG9A-220ENST00000475339 FEM1BQ9UK73 627 aa16.72■□□□□ 0.27
ATG9A-220ENST00000475339 COL4A6Q14031 1691 aa16.72■□□□□ 0.27
ATG9A-220ENST00000475339 TPRP12270 2363 aaKnown RBP16.71■□□□□ 0.27
ATG9A-220ENST00000475339 TCRBV5S4A2TA0A5A2 114 aa16.71■□□□□ 0.27
ATG9A-220ENST00000475339 PRR23AA6NEV1 266 aa16.71■□□□□ 0.27
ATG9A-220ENST00000475339 IKBKEQ14164 716 aa16.71■□□□□ 0.27
ATG9A-220ENST00000475339 CCDC155Q8N6L0 562 aa16.71■□□□□ 0.27
ATG9A-220ENST00000475339 EXOC6Q8TAG9 804 aa16.71■□□□□ 0.27
ATG9A-220ENST00000475339 ATP8A2Q9NTI2 1148 aa16.71■□□□□ 0.27
ATG9A-220ENST00000475339 BAZ2AQ9UIF9 1905 aaKnown RBP16.7■□□□□ 0.26
ATG9A-220ENST00000475339 NCK2O43639 380 aa16.7■□□□□ 0.26
ATG9A-220ENST00000475339 SMARCA5O60264 1052 aaPredicted RBP16.7■□□□□ 0.26
ATG9A-220ENST00000475339 EFCAB14O75071 495 aa16.7■□□□□ 0.26
ATG9A-220ENST00000475339 SMAD4Q13485 552 aaKnown RBP16.7■□□□□ 0.26
ATG9A-220ENST00000475339 AMOTL1Q8IY63 956 aa16.7■□□□□ 0.26
ATG9A-220ENST00000475339 SP7Q8TDD2 431 aaPredicted RBP16.7■□□□□ 0.26
ATG9A-220ENST00000475339 DHX38Q92620 1227 aaKnown RBP16.7■□□□□ 0.26
ATG9A-220ENST00000475339 TRERF1Q96PN7 1200 aa16.7■□□□□ 0.26
ATG9A-220ENST00000475339 NYAP2Q9P242 653 aa16.7■□□□□ 0.26
ATG9A-220ENST00000475339 MBD4O95243 580 aa16.69■□□□□ 0.26
ATG9A-220ENST00000475339 ALAS1P13196 640 aa16.69■□□□□ 0.26
ATG9A-220ENST00000475339 HTRA4P83105 476 aaPredicted RBP16.69■□□□□ 0.26
ATG9A-220ENST00000475339 SLFNL1Q499Z3 407 aa16.69■□□□□ 0.26
ATG9A-220ENST00000475339 BRDTQ58F21 947 aaPredicted RBP16.69■□□□□ 0.26
ATG9A-220ENST00000475339 GDF6Q6KF10 455 aaPredicted RBP16.69■□□□□ 0.26
ATG9A-220ENST00000475339 MYOCDQ8IZQ8 938 aa16.69■□□□□ 0.26
ATG9A-220ENST00000475339 MORC4Q8TE76 937 aa16.69■□□□□ 0.26
ATG9A-220ENST00000475339 GPATCH3Q96I76 525 aa16.69■□□□□ 0.26
ATG9A-220ENST00000475339 SAMD11Q96NU1 681 aa16.69■□□□□ 0.26
ATG9A-220ENST00000475339 CYP39A1Q9NYL5 469 aa16.69■□□□□ 0.26
ATG9A-220ENST00000475339 CLIP2Q9UDT6 1046 aa16.69■□□□□ 0.26
ATG9A-220ENST00000475339 NCOR2Q9Y618 2525 aa16.69■□□□□ 0.26
ATG9A-220ENST00000475339 KPNA6O60684 536 aa16.68■□□□□ 0.26
ATG9A-220ENST00000475339 TBX10O75333 385 aa16.68■□□□□ 0.26
ATG9A-220ENST00000475339 PARNO95453 639 aaKnown RBP16.68■□□□□ 0.26
ATG9A-220ENST00000475339 CKBP12277 381 aa16.68■□□□□ 0.26
ATG9A-220ENST00000475339 IRX6P78412 446 aaPredicted RBP16.68■□□□□ 0.26
ATG9A-220ENST00000475339 HYAL1Q12794 435 aa16.68■□□□□ 0.26
ATG9A-220ENST00000475339 TTF1Q15361 905 aaPredicted RBP16.68■□□□□ 0.26
ATG9A-220ENST00000475339 MUM1L1Q5H9M0 696 aa16.68■□□□□ 0.26
ATG9A-220ENST00000475339 TMEM192Q8IY95 271 aa16.68■□□□□ 0.26
ATG9A-220ENST00000475339 DNAJC2Q99543 621 aaKnown RBP16.68■□□□□ 0.26
ATG9A-220ENST00000475339 MED19A0JLT2 244 aaPredicted RBP16.67■□□□□ 0.26
ATG9A-220ENST00000475339 A6NJR5 290 aa16.67■□□□□ 0.26
ATG9A-220ENST00000475339 SIGLEC14Q08ET2 396 aa16.67■□□□□ 0.26
ATG9A-220ENST00000475339 MKRN4PQ13434 485 aaPredicted RBP16.67■□□□□ 0.26
ATG9A-220ENST00000475339 HDAC1Q13547 482 aaPredicted RBP16.67■□□□□ 0.26
ATG9A-220ENST00000475339 FBXO11Q86XK2 927 aa16.67■□□□□ 0.26
ATG9A-220ENST00000475339 STK11IPQ8N1F8 1099 aa16.67■□□□□ 0.26
ATG9A-220ENST00000475339 ASIC4Q96FT7 647 aa16.67■□□□□ 0.26
ATG9A-220ENST00000475339 RWDD1Q9H446 243 aaPredicted RBP16.67■□□□□ 0.26
ATG9A-220ENST00000475339 CD207Q9UJ71 328 aa16.67■□□□□ 0.26
ATG9A-220ENST00000475339 RBM47A0AV96 593 aaKnown RBP16.66■□□□□ 0.26
ATG9A-220ENST00000475339 KDM4AO75164 1064 aa16.66■□□□□ 0.26
ATG9A-220ENST00000475339 RASA1P20936 1047 aa16.66■□□□□ 0.26
ATG9A-220ENST00000475339 GTF2F1P35269 517 aaKnown RBP eCLIP16.66■□□□□ 0.26
ATG9A-220ENST00000475339 TKFCQ3LXA3 575 aa16.66■□□□□ 0.26
ATG9A-220ENST00000475339 CTR9Q6PD62 1173 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms