RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 ACRBPQ8NEB7 543 aa13.92□□□□□ -0.18
RNF220-211ENST00000474956 CTAGE1Q96RT6 745 aa13.92□□□□□ -0.18
RNF220-211ENST00000474956 RWDD2AQ9UIY3 292 aa13.92□□□□□ -0.18
RNF220-211ENST00000474956 ADAM21Q9UKJ8 722 aa13.92□□□□□ -0.18
RNF220-211ENST00000474956 GNA11P29992 359 aa13.92□□□□□ -0.18
RNF220-211ENST00000474956 COPB1P53618 953 aaKnown RBP13.92□□□□□ -0.18
RNF220-211ENST00000474956 SPICE1Q8N0Z3 855 aa13.92□□□□□ -0.18
RNF220-211ENST00000474956 SLC39A2Q9NP94 309 aa13.92□□□□□ -0.18
RNF220-211ENST00000474956 ASIC1P78348 528 aa13.92□□□□□ -0.18
RNF220-211ENST00000474956 GRB10Q13322 594 aa13.92□□□□□ -0.18
RNF220-211ENST00000474956 ZSCAN26Q16670 478 aa13.92□□□□□ -0.18
RNF220-211ENST00000474956 PNMA5Q96PV4 448 aa13.92□□□□□ -0.18
RNF220-211ENST00000474956 TRIM9Q9C026 710 aa13.92□□□□□ -0.18
RNF220-211ENST00000474956 CCSER1Q9C0I3 900 aa13.92□□□□□ -0.18
RNF220-211ENST00000474956 YDJCA8MPS7 323 aa13.91□□□□□ -0.18
RNF220-211ENST00000474956 ERLIN1O75477 346 aa13.91□□□□□ -0.18
RNF220-211ENST00000474956 ERVK-24P63145 666 aa13.91□□□□□ -0.18
RNF220-211ENST00000474956 EN1Q05925 392 aaPredicted RBP13.91□□□□□ -0.18
RNF220-211ENST00000474956 EZH2Q15910 746 aaKnown RBP13.91□□□□□ -0.18
RNF220-211ENST00000474956 CALCRLQ16602 461 aa13.91□□□□□ -0.18
RNF220-211ENST00000474956 FILIP1LQ4L180 1135 aa13.91□□□□□ -0.18
RNF220-211ENST00000474956 MSL3Q8N5Y2 521 aaKnown RBP13.91□□□□□ -0.18
RNF220-211ENST00000474956 ZSWIM4Q9H7M6 989 aa13.91□□□□□ -0.18
RNF220-211ENST00000474956 BLOC1S4Q9NUP1 217 aa13.91□□□□□ -0.18
RNF220-211ENST00000474956 RAB21Q9UL25 225 aa13.91□□□□□ -0.18
RNF220-211ENST00000474956 PLIN4Q96Q06 1357 aa13.91□□□□□ -0.18
RNF220-211ENST00000474956 C21orf2O43822 256 aa13.91□□□□□ -0.18
RNF220-211ENST00000474956 PDE4DQ08499 809 aa13.91□□□□□ -0.18
RNF220-211ENST00000474956 GALNT17Q6IS24 598 aa13.91□□□□□ -0.18
RNF220-211ENST00000474956 MSANTD4Q8NCY6 345 aa13.91□□□□□ -0.18
RNF220-211ENST00000474956 ZBTB9Q96C00 473 aa13.91□□□□□ -0.18
RNF220-211ENST00000474956 MTMR9Q96QG7 549 aa13.91□□□□□ -0.18
RNF220-211ENST00000474956 DUSP9Q99956 384 aaKnown RBP13.91□□□□□ -0.18
RNF220-211ENST00000474956 CWC15Q9P013 229 aaKnown RBP13.91□□□□□ -0.18
RNF220-211ENST00000474956 QSER1Q2KHR3 1735 aa13.91□□□□□ -0.18
RNF220-211ENST00000474956 PLSCR1O15162 318 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 MFAP3LO75121 409 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 CACNB1Q02641 598 aaPredicted RBP13.9□□□□□ -0.18
RNF220-211ENST00000474956 HDXQ7Z353 690 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 KIAA0895Q8NCT3 520 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 CCDC51Q96ER9 411 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 PRMT6Q96LA8 375 aaPredicted RBP13.9□□□□□ -0.18
RNF220-211ENST00000474956 ANKZF1Q9H8Y5 726 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 MYMKA6NI61 221 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 UBXN1Q04323 297 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 LRRC41Q15345 812 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 USH1GQ495M9 461 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 ASPRV1Q53RT3 343 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 BEND6Q5SZJ8 279 aaPredicted RBP13.9□□□□□ -0.18
RNF220-211ENST00000474956 ANKRD40Q6AI12 368 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 HHIPL2Q6UWX4 724 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 CERS3Q8IU89 383 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 CNGA4Q8IV77 575 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 TRIM47Q96LD4 638 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 CHP1Q99653 195 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 POLD4Q9HCU8 107 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 PUF60Q9UHX1 559 aaKnown RBP13.9□□□□□ -0.18
RNF220-211ENST00000474956 CLRN2A0PK11 232 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 H3BQF6 201 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 KIF4BQ2VIQ3 1234 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 ZNF569Q5MCW4 686 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 GOLGA5Q8TBA6 731 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 HAS1Q92839 578 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 ZFP91Q96JP5 570 aaPredicted RBP13.9□□□□□ -0.18
RNF220-211ENST00000474956 ZDHHC15Q96MV8 337 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 FGFBP2Q9BYJ0 223 aa13.9□□□□□ -0.18
RNF220-211ENST00000474956 LIMA1Q9UHB6 759 aaKnown RBP13.9□□□□□ -0.18
RNF220-211ENST00000474956 CTAGE9A4FU28 777 aa13.89□□□□□ -0.19
RNF220-211ENST00000474956 B4DLN1 442 aa13.89□□□□□ -0.19
RNF220-211ENST00000474956 EIF3JO75822 258 aaKnown RBP13.89□□□□□ -0.19
RNF220-211ENST00000474956 HLA-DOAP06340 250 aa13.89□□□□□ -0.19
RNF220-211ENST00000474956 STAT3P40763 770 aa13.89□□□□□ -0.19
RNF220-211ENST00000474956 QRICH1Q2TAL8 776 aa13.89□□□□□ -0.19
RNF220-211ENST00000474956 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
RNF220-211ENST00000474956 GIMAP8Q8ND71 665 aaPredicted RBP13.89□□□□□ -0.19
RNF220-211ENST00000474956 TRERF1Q96PN7 1200 aa13.89□□□□□ -0.19
RNF220-211ENST00000474956 TRIM10Q9UDY6 481 aa13.89□□□□□ -0.19
RNF220-211ENST00000474956 LRWD1Q9UFC0 647 aa13.89□□□□□ -0.19
RNF220-211ENST00000474956 PNMA6FA0A0J9YX94 578 aa13.89□□□□□ -0.19
RNF220-211ENST00000474956 H0YIN7 160 aa13.89□□□□□ -0.19
RNF220-211ENST00000474956 PRPHP41219 470 aa13.89□□□□□ -0.19
RNF220-211ENST00000474956 CERKLQ49MI3 558 aaPredicted RBP13.89□□□□□ -0.19
RNF220-211ENST00000474956 TTI2Q6NXR4 508 aa13.89□□□□□ -0.19
RNF220-211ENST00000474956 TMC4Q7Z404 712 aa13.89□□□□□ -0.19
RNF220-211ENST00000474956 ZBTB12Q9Y330 459 aaPredicted RBP13.89□□□□□ -0.19
RNF220-211ENST00000474956 RHOBTB3O94955 611 aa13.89□□□□□ -0.19
RNF220-211ENST00000474956 LMAN1P49257 510 aa13.89□□□□□ -0.19
RNF220-211ENST00000474956 ITIH6Q6UXX5 1313 aa13.89□□□□□ -0.19
RNF220-211ENST00000474956 CCDC84Q86UT8 332 aaPredicted RBP13.89□□□□□ -0.19
RNF220-211ENST00000474956 FEZ2Q9UHY8 353 aaPredicted RBP13.89□□□□□ -0.19
RNF220-211ENST00000474956 ARFGEF1Q9Y6D6 1849 aa13.89□□□□□ -0.19
RNF220-211ENST00000474956 NPHP3-ACAD11A0A0J9YXS1 232 aa13.88□□□□□ -0.19
RNF220-211ENST00000474956 RAD17O75943 681 aa13.88□□□□□ -0.19
RNF220-211ENST00000474956 TUBBP07437 444 aa13.88□□□□□ -0.19
RNF220-211ENST00000474956 FECHP22830 423 aa13.88□□□□□ -0.19
RNF220-211ENST00000474956 SLC1A4P43007 532 aa13.88□□□□□ -0.19
RNF220-211ENST00000474956 KIAA1755Q5JYT7 1200 aa13.88□□□□□ -0.19
RNF220-211ENST00000474956 PODNQ7Z5L7 613 aa13.88□□□□□ -0.19
RNF220-211ENST00000474956 TBC1D7Q9P0N9 293 aa13.88□□□□□ -0.19
RNF220-211ENST00000474956 GREB1LQ9C091 1923 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms