RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 CNNM4Q6P4Q7 775 aa8.9□□□□□ -0.98
CCDC93-208ENST00000474546 FBXO46Q6PJ61 603 aaPredicted RBP8.9□□□□□ -0.98
CCDC93-208ENST00000474546 CYB5R4Q7L1T6 521 aa8.9□□□□□ -0.98
CCDC93-208ENST00000474546 TBC1D10CQ8IV04 446 aa8.9□□□□□ -0.98
CCDC93-208ENST00000474546 ADSSL1Q8N142 457 aa8.9□□□□□ -0.98
CCDC93-208ENST00000474546 NOA1Q8NC60 698 aaKnown RBP8.9□□□□□ -0.98
CCDC93-208ENST00000474546 ACRBPQ8NEB7 543 aa8.9□□□□□ -0.98
CCDC93-208ENST00000474546 NOX5Q96PH1 765 aa8.9□□□□□ -0.98
CCDC93-208ENST00000474546 CNOT10Q9H9A5 744 aaKnown RBP8.9□□□□□ -0.98
CCDC93-208ENST00000474546 CABP5Q9NP86 173 aa8.9□□□□□ -0.98
CCDC93-208ENST00000474546 FAM217BQ9NTX9 383 aaPredicted RBP8.9□□□□□ -0.98
CCDC93-208ENST00000474546 NLRP2Q9NX02 1062 aa8.9□□□□□ -0.98
CCDC93-208ENST00000474546 CEP83Q9Y592 693 aa8.9□□□□□ -0.98
CCDC93-208ENST00000474546 PCDHB6Q9Y5E3 794 aa8.9□□□□□ -0.98
CCDC93-208ENST00000474546 ZNF532Q9HCE3 1301 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 PJA2O43164 708 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 PHACTR2O75167 634 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 RHOBTB3O94955 611 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 PDE8BO95263 885 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 PRR29P0C7W0 189 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 NF2P35240 595 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 STAT6P42226 847 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 CCT5P48643 541 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 SEPT2Q15019 361 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 NKX1-1Q15270 411 aaPredicted RBP8.89□□□□□ -0.99
CCDC93-208ENST00000474546 E2F4Q16254 413 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 VWA3BQ502W6 1294 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 LRRC24Q50LG9 513 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 LDHAL6AQ6ZMR3 332 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 SAPCD2Q86UD0 394 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 ZSCAN29Q8IWY8 852 aaPredicted RBP8.89□□□□□ -0.99
CCDC93-208ENST00000474546 TRIM47Q96LD4 638 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 DRC1Q96MC2 740 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 ANKRD27Q96NW4 1050 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 LZTS2Q9BRK4 669 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 IFIH1Q9BYX4 1025 aaKnown RBP8.89□□□□□ -0.99
CCDC93-208ENST00000474546 CCSER1Q9C0I3 900 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 EPC1Q9H2F5 836 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 CXorf56Q9H5V9 222 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 KAT14Q9H8E8 782 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 BATF3Q9NR55 127 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 CNNM1Q9NRU3 951 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 IGSF5Q9NSI5 407 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 GNL3LQ9NVN8 582 aaKnown RBP8.89□□□□□ -0.99
CCDC93-208ENST00000474546 ZSWIM5Q9P217 1185 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 HACL1Q9UJ83 578 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 PLAGL2Q9UPG8 496 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 MYH3P11055 1940 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 PAPPA2Q9BXP8 1791 aa8.89□□□□□ -0.99
CCDC93-208ENST00000474546 TTC28Q96AY4 2481 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 TTC26A0AVF1 554 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 PRAMEF22A3QJZ6 481 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 DTNBO60941 627 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 N4BP1O75113 896 aaKnown RBP8.88□□□□□ -0.99
CCDC93-208ENST00000474546 IDH1O75874 414 aaKnown RBP8.88□□□□□ -0.99
CCDC93-208ENST00000474546 STARD3NLO95772 234 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 GNA14O95837 355 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 CCNE1P24864 410 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 HNRNPH1P31943 449 aaKnown RBP8.88□□□□□ -0.99
CCDC93-208ENST00000474546 EPHX2P34913 555 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 CCT6AP40227 531 aaKnown RBP8.88□□□□□ -0.99
CCDC93-208ENST00000474546 AFMP43652 599 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 GYS2P54840 703 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 EIF3BP55884 814 aaKnown RBP8.88□□□□□ -0.99
CCDC93-208ENST00000474546 GOLGA8FQ08AF8 430 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 GOLGA8DPQ0D2H9 430 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 CCDC96Q2M329 555 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 CST9Q5W186 159 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 NCAPH2Q6IBW4 605 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 PDXDC2PQ6P474 469 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 CCDC121Q6ZUS5 278 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 SND1Q7KZF4 910 aaKnown RBP eCLIP8.88□□□□□ -0.99
CCDC93-208ENST00000474546 APLFQ8IW19 511 aaPredicted RBP8.88□□□□□ -0.99
CCDC93-208ENST00000474546 ANKS4BQ8N8V4 417 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 GIMAP8Q8ND71 665 aaPredicted RBP8.88□□□□□ -0.99
CCDC93-208ENST00000474546 SPATA4Q8NEY3 305 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 ZNF507Q8TCN5 953 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 MMS19Q96T76 1030 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 PLCD4Q9BRC7 762 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 BRIP1Q9BX63 1249 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 IRX2Q9BZI1 471 aaPredicted RBP8.88□□□□□ -0.99
CCDC93-208ENST00000474546 STMN4Q9H169 189 aaPredicted RBP8.88□□□□□ -0.99
CCDC93-208ENST00000474546 VPS16Q9H269 839 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 SH2D4AQ9H788 454 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 NHEJ1Q9H9Q4 299 aaPredicted RBP8.88□□□□□ -0.99
CCDC93-208ENST00000474546 TCP11L1Q9NUJ3 509 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 HDAC9Q9UKV0 1011 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 DAAM1Q9Y4D1 1078 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 RIPOR2Q9Y4F9 1068 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 NDUFB9Q9Y6M9 179 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 LAMA2P24043 3122 aaKnown RBP8.88□□□□□ -0.99
CCDC93-208ENST00000474546 KIAA0100Q14667 2235 aaKnown RBP8.88□□□□□ -0.99
CCDC93-208ENST00000474546 RIC1Q4ADV7 1423 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 MYH8P13535 1937 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 MYH2Q9UKX2 1941 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 MYH13Q9UKX3 1938 aa8.88□□□□□ -0.99
CCDC93-208ENST00000474546 DLEC1Q9Y238 1755 aa8.87□□□□□ -0.99
CCDC93-208ENST00000474546 TMEM265A0A087WTH1 108 aa8.87□□□□□ -0.99
CCDC93-208ENST00000474546 TCRBV5S4A2TA0A5A2 114 aa8.87□□□□□ -0.99
CCDC93-208ENST00000474546 BTNL10A8MVZ5 291 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms