RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 RTN1Q16799 776 aa12.45□□□□□ -0.42
RNF220-210ENST00000474394 GJC2Q5T442 439 aaPredicted RBP12.45□□□□□ -0.42
RNF220-210ENST00000474394 TMTC3Q6ZXV5 915 aa12.45□□□□□ -0.42
RNF220-210ENST00000474394 RNF180Q86T96 592 aa12.45□□□□□ -0.42
RNF220-210ENST00000474394 FBXL16Q8N461 479 aa12.45□□□□□ -0.42
RNF220-210ENST00000474394 SRBD1Q8N5C6 995 aaKnown RBP12.45□□□□□ -0.42
RNF220-210ENST00000474394 SYTL5Q8TDW5 730 aaPredicted RBP12.45□□□□□ -0.42
RNF220-210ENST00000474394 TBC1D5Q92609 795 aa12.45□□□□□ -0.42
RNF220-210ENST00000474394 KATNBL1Q9H079 304 aa12.45□□□□□ -0.42
RNF220-210ENST00000474394 VTA1Q9NP79 307 aa12.45□□□□□ -0.42
RNF220-210ENST00000474394 MAP3K20Q9NYL2 800 aaKnown RBP12.45□□□□□ -0.42
RNF220-210ENST00000474394 BRPF3Q9ULD4 1205 aa12.45□□□□□ -0.42
RNF220-210ENST00000474394 LCTP09848 1927 aa12.45□□□□□ -0.42
RNF220-210ENST00000474394 PGK1P00558 417 aa12.44□□□□□ -0.42
RNF220-210ENST00000474394 COL6A1P12109 1028 aa12.44□□□□□ -0.42
RNF220-210ENST00000474394 HSD17B4P51659 736 aa12.44□□□□□ -0.42
RNF220-210ENST00000474394 MDM2Q00987 491 aaPredicted RBP12.44□□□□□ -0.42
RNF220-210ENST00000474394 APOBRQ0VD83 1088 aa12.44□□□□□ -0.42
RNF220-210ENST00000474394 PPP2R5BQ15173 497 aa12.44□□□□□ -0.42
RNF220-210ENST00000474394 IQSEC1Q6DN90 963 aa12.44□□□□□ -0.42
RNF220-210ENST00000474394 NOL8Q76FK4 1167 aaKnown RBP12.44□□□□□ -0.42
RNF220-210ENST00000474394 RUFY3Q7L099 469 aa12.44□□□□□ -0.42
RNF220-210ENST00000474394 EEPD1Q7L9B9 569 aa12.44□□□□□ -0.42
RNF220-210ENST00000474394 FBXO16Q8IX29 292 aaPredicted RBP12.44□□□□□ -0.42
RNF220-210ENST00000474394 CMTR1Q8N1G2 835 aaKnown RBP12.44□□□□□ -0.42
RNF220-210ENST00000474394 CCDC82Q8N4S0 544 aa12.44□□□□□ -0.42
RNF220-210ENST00000474394 NSUN6Q8TEA1 469 aaKnown RBP12.44□□□□□ -0.42
RNF220-210ENST00000474394 BRF1Q92994 677 aa12.44□□□□□ -0.42
RNF220-210ENST00000474394 TAAR1Q96RJ0 339 aa12.44□□□□□ -0.42
RNF220-210ENST00000474394 AGXT2Q9BYV1 514 aa12.44□□□□□ -0.42
RNF220-210ENST00000474394 TM6SF1Q9BZW5 370 aa12.44□□□□□ -0.42
RNF220-210ENST00000474394 SPC25Q9HBM1 224 aa12.44□□□□□ -0.42
RNF220-210ENST00000474394 ZSWIM6Q9HCJ5 1215 aa12.44□□□□□ -0.42
RNF220-210ENST00000474394 CYP46A1Q9Y6A2 500 aa12.44□□□□□ -0.42
RNF220-210ENST00000474394 DDX49Q9Y6V7 483 aaKnown RBP12.44□□□□□ -0.42
RNF220-210ENST00000474394 CCDC196A0A1B0GTZ2 297 aa12.43□□□□□ -0.42
RNF220-210ENST00000474394 GCOM1H8Y6P7 765 aaPredicted RBP12.43□□□□□ -0.42
RNF220-210ENST00000474394 OPLAHO14841 1288 aa12.43□□□□□ -0.42
RNF220-210ENST00000474394 POLR2MP0CAP2 368 aa12.43□□□□□ -0.42
RNF220-210ENST00000474394 EDNRBP24530 442 aa12.43□□□□□ -0.42
RNF220-210ENST00000474394 ADCYAP1R1P41586 468 aa12.43□□□□□ -0.42
RNF220-210ENST00000474394 METAP2P50579 478 aaKnown RBP eCLIP12.43□□□□□ -0.42
RNF220-210ENST00000474394 GHRHRQ02643 423 aa12.43□□□□□ -0.42
RNF220-210ENST00000474394 TNFAIP2Q03169 654 aa12.43□□□□□ -0.42
RNF220-210ENST00000474394 ARHGEF16Q5VV41 709 aa12.43□□□□□ -0.42
RNF220-210ENST00000474394 LENG1Q96BZ8 264 aaPredicted RBP12.43□□□□□ -0.42
RNF220-210ENST00000474394 IWS1Q96ST2 819 aa12.43□□□□□ -0.42
RNF220-210ENST00000474394 RMDN3Q96TC7 470 aa12.43□□□□□ -0.42
RNF220-210ENST00000474394 SENP6Q9GZR1 1112 aaPredicted RBP12.43□□□□□ -0.42
RNF220-210ENST00000474394 SEMA6BQ9H3T3 888 aa12.43□□□□□ -0.42
RNF220-210ENST00000474394 COL20A1Q9P218 1284 aa12.43□□□□□ -0.42
RNF220-210ENST00000474394 SYNRGQ9UMZ2 1314 aa12.42□□□□□ -0.42
RNF220-210ENST00000474394 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.42□□□□□ -0.42
RNF220-210ENST00000474394 ADAMTS4O75173 837 aa12.42□□□□□ -0.42
RNF220-210ENST00000474394 HOXD11P31277 338 aaPredicted RBP12.42□□□□□ -0.42
RNF220-210ENST00000474394 ANAPC15P60006 121 aa12.42□□□□□ -0.42
RNF220-210ENST00000474394 TAPT1Q6NXT6 567 aa12.42□□□□□ -0.42
RNF220-210ENST00000474394 CUL5Q93034 780 aa12.42□□□□□ -0.42
RNF220-210ENST00000474394 TSEN34Q9BSV6 310 aaKnown RBP12.42□□□□□ -0.42
RNF220-210ENST00000474394 UPF3AQ9H1J1 476 aaKnown RBP12.42□□□□□ -0.42
RNF220-210ENST00000474394 PDGFCQ9NRA1 345 aa12.42□□□□□ -0.42
RNF220-210ENST00000474394 CNTNAP5Q8WYK1 1306 aa12.41□□□□□ -0.42
RNF220-210ENST00000474394 LRRC37A2A6NM11 1700 aa12.41□□□□□ -0.42
RNF220-210ENST00000474394 ADCY6O43306 1168 aa12.41□□□□□ -0.42
RNF220-210ENST00000474394 C6orf222P0C671 652 aaPredicted RBP12.41□□□□□ -0.42
RNF220-210ENST00000474394 SMPD1P17405 629 aa12.41□□□□□ -0.42
RNF220-210ENST00000474394 CDC27P30260 824 aa12.41□□□□□ -0.42
RNF220-210ENST00000474394 HOXA13P31271 388 aaPredicted RBP12.41□□□□□ -0.42
RNF220-210ENST00000474394 GJA9P57773 515 aa12.41□□□□□ -0.42
RNF220-210ENST00000474394 STXBP2Q15833 593 aa12.41□□□□□ -0.42
RNF220-210ENST00000474394 TJAP1Q5JTD0 557 aa12.41□□□□□ -0.42
RNF220-210ENST00000474394 PCSK9Q8NBP7 692 aaKnown RBP12.41□□□□□ -0.42
RNF220-210ENST00000474394 KLHDC9Q8NEP7 349 aa12.41□□□□□ -0.42
RNF220-210ENST00000474394 SCFD2Q8WU76 684 aa12.41□□□□□ -0.42
RNF220-210ENST00000474394 WDR11Q9BZH6 1224 aa12.41□□□□□ -0.42
RNF220-210ENST00000474394 UPF3BQ9BZI7 483 aaKnown RBP12.41□□□□□ -0.42
RNF220-210ENST00000474394 AP5M1Q9H0R1 490 aa12.41□□□□□ -0.42
RNF220-210ENST00000474394 PXMP2Q9NR77 195 aa12.41□□□□□ -0.42
RNF220-210ENST00000474394 FAM217BQ9NTX9 383 aaPredicted RBP12.41□□□□□ -0.42
RNF220-210ENST00000474394 PHF24Q9UPV7 400 aa12.41□□□□□ -0.42
RNF220-210ENST00000474394 GNEQ9Y223 722 aaKnown RBP12.41□□□□□ -0.42
RNF220-210ENST00000474394 Q9Y3F1 56 aa12.41□□□□□ -0.42
RNF220-210ENST00000474394 hCG_1642624A0A1W2PR95 340 aa12.4□□□□□ -0.42
RNF220-210ENST00000474394 RBM47A0AV96 593 aaKnown RBP12.4□□□□□ -0.42
RNF220-210ENST00000474394 MOXD2PA6NHM9 499 aa12.4□□□□□ -0.42
RNF220-210ENST00000474394 NR3C2P08235 984 aa12.4□□□□□ -0.42
RNF220-210ENST00000474394 EIF2AK2P19525 551 aaKnown RBP12.4□□□□□ -0.42
RNF220-210ENST00000474394 CST5P28325 142 aaPredicted RBP12.4□□□□□ -0.42
RNF220-210ENST00000474394 EVCP57679 992 aa12.4□□□□□ -0.42
RNF220-210ENST00000474394 FUT2Q10981 343 aa12.4□□□□□ -0.42
RNF220-210ENST00000474394 LRRC26Q2I0M4 334 aa12.4□□□□□ -0.42
RNF220-210ENST00000474394 DUSP28Q4G0W2 176 aa12.4□□□□□ -0.42
RNF220-210ENST00000474394 GNASQ5JWF2 1037 aa12.4□□□□□ -0.42
RNF220-210ENST00000474394 HEATR3Q7Z4Q2 680 aa12.4□□□□□ -0.42
RNF220-210ENST00000474394 TLK2Q86UE8 772 aa12.4□□□□□ -0.42
RNF220-210ENST00000474394 FCHSD1Q86WN1 690 aa12.4□□□□□ -0.42
RNF220-210ENST00000474394 SMARCC2Q8TAQ2 1214 aa12.4□□□□□ -0.42
RNF220-210ENST00000474394 FERMT2Q96AC1 680 aa12.4□□□□□ -0.42
RNF220-210ENST00000474394 PDRG1Q9NUG6 133 aa12.4□□□□□ -0.42
RNF220-210ENST00000474394 V9GY48 417 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms