RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 GCOM1H8Y6P7 765 aaPredicted RBP23.35■■□□□ 1.33
HLA-B-252ENST00000474381 NKRFO15226 690 aaKnown RBP eCLIP23.35■■□□□ 1.33
HLA-B-252ENST00000474381 CTAGE5O15320 804 aa23.35■■□□□ 1.33
HLA-B-252ENST00000474381 POLR2MP0CAP2 368 aa23.35■■□□□ 1.33
HLA-B-252ENST00000474381 RPS6KB1P23443 525 aa23.35■■□□□ 1.33
HLA-B-252ENST00000474381 STXBP2Q15833 593 aa23.35■■□□□ 1.33
HLA-B-252ENST00000474381 ARHGEF16Q5VV41 709 aa23.35■■□□□ 1.33
HLA-B-252ENST00000474381 AGXT2Q9BYV1 514 aa23.35■■□□□ 1.33
HLA-B-252ENST00000474381 ALPK3Q96L96 1907 aa23.35■■□□□ 1.33
HLA-B-252ENST00000474381 ELP1O95163 1332 aa23.34■■□□□ 1.33
HLA-B-252ENST00000474381 EIF5BO60841 1220 aaKnown RBP23.34■■□□□ 1.33
HLA-B-252ENST00000474381 ASGR1P07306 291 aa23.34■■□□□ 1.33
HLA-B-252ENST00000474381 CPA1P15085 419 aa23.34■■□□□ 1.33
HLA-B-252ENST00000474381 RTN1Q16799 776 aa23.34■■□□□ 1.33
HLA-B-252ENST00000474381 RAB11FIP4Q86YS3 637 aa23.34■■□□□ 1.33
HLA-B-252ENST00000474381 PIBF1Q8WXW3 757 aa23.34■■□□□ 1.33
HLA-B-252ENST00000474381 GLT1D1Q96MS3 346 aa23.34■■□□□ 1.33
HLA-B-252ENST00000474381 STARD7Q9NQZ5 370 aa23.34■■□□□ 1.33
HLA-B-252ENST00000474381 DYNC1LI2O43237 492 aaPredicted RBP23.33■■□□□ 1.33
HLA-B-252ENST00000474381 CASTP20810 708 aaKnown RBP23.33■■□□□ 1.33
HLA-B-252ENST00000474381 FSCN1Q16658 493 aaKnown RBP23.33■■□□□ 1.33
HLA-B-252ENST00000474381 Q6ZUG5 572 aa23.33■■□□□ 1.33
HLA-B-252ENST00000474381 CMTR1Q8N1G2 835 aaKnown RBP23.33■■□□□ 1.33
HLA-B-252ENST00000474381 TM6SF1Q9BZW5 370 aa23.33■■□□□ 1.33
HLA-B-252ENST00000474381 ZMYND8Q9ULU4 1186 aaPredicted RBP23.33■■□□□ 1.33
HLA-B-252ENST00000474381 ATP11BQ9Y2G3 1177 aa23.33■■□□□ 1.33
HLA-B-252ENST00000474381 GOLGA8AA7E2F4 631 aa23.32■■□□□ 1.32
HLA-B-252ENST00000474381 GOLGA8BA8MQT2 603 aa23.32■■□□□ 1.32
HLA-B-252ENST00000474381 ZEB2O60315 1214 aa23.32■■□□□ 1.32
HLA-B-252ENST00000474381 EIF3JO75822 258 aaKnown RBP23.32■■□□□ 1.32
HLA-B-252ENST00000474381 NR3C2P08235 984 aa23.32■■□□□ 1.32
HLA-B-252ENST00000474381 EIF2AK2P19525 551 aaKnown RBP23.32■■□□□ 1.32
HLA-B-252ENST00000474381 HOXA13P31271 388 aaPredicted RBP23.32■■□□□ 1.32
HLA-B-252ENST00000474381 IRX5P78411 483 aaPredicted RBP23.32■■□□□ 1.32
HLA-B-252ENST00000474381 TTLL4Q14679 1199 aa23.32■■□□□ 1.32
HLA-B-252ENST00000474381 BRF1Q92994 677 aa23.32■■□□□ 1.32
HLA-B-252ENST00000474381 PDCD2LQ9BRP1 358 aa23.32■■□□□ 1.32
HLA-B-252ENST00000474381 PRO3102Q9H379 93 aa23.32■■□□□ 1.32
HLA-B-252ENST00000474381 ZSWIM6Q9HCJ5 1215 aa23.32■■□□□ 1.32
HLA-B-252ENST00000474381 COLQQ9Y215 455 aaPredicted RBP23.32■■□□□ 1.32
HLA-B-252ENST00000474381 DNAH12Q6ZR08 3092 aa23.32■■□□□ 1.32
HLA-B-252ENST00000474381 MYH6P13533 1939 aa23.31■■□□□ 1.32
HLA-B-252ENST00000474381 NID2Q14112 1375 aa23.31■■□□□ 1.32
HLA-B-252ENST00000474381 CCDC196A0A1B0GTZ2 297 aa23.31■■□□□ 1.32
HLA-B-252ENST00000474381 PIK3CDO00329 1044 aa23.31■■□□□ 1.32
HLA-B-252ENST00000474381 CABYRO75952 493 aa23.31■■□□□ 1.32
HLA-B-252ENST00000474381 FUT2Q10981 343 aa23.31■■□□□ 1.32
HLA-B-252ENST00000474381 TRIM60Q495X7 471 aa23.31■■□□□ 1.32
HLA-B-252ENST00000474381 CHRDL2Q6WN34 429 aa23.31■■□□□ 1.32
HLA-B-252ENST00000474381 RUFY3Q7L099 469 aa23.31■■□□□ 1.32
HLA-B-252ENST00000474381 CCDC82Q8N4S0 544 aa23.31■■□□□ 1.32
HLA-B-252ENST00000474381 CNTNAP5Q8WYK1 1306 aa23.31■■□□□ 1.32
HLA-B-252ENST00000474381 TXNP10599 105 aaKnown RBP23.3■■□□□ 1.32
HLA-B-252ENST00000474381 SYN1P17600 705 aa23.3■■□□□ 1.32
HLA-B-252ENST00000474381 CPT1AP50416 773 aa23.3■■□□□ 1.32
HLA-B-252ENST00000474381 METAP2P50579 478 aaKnown RBP eCLIP23.3■■□□□ 1.32
HLA-B-252ENST00000474381 BEX3Q00994 111 aa23.3■■□□□ 1.32
HLA-B-252ENST00000474381 TMEM63BQ5T3F8 832 aa23.3■■□□□ 1.32
HLA-B-252ENST00000474381 CCDC62Q6P9F0 684 aa23.3■■□□□ 1.32
HLA-B-252ENST00000474381 ANKRD33Q7Z3H0 272 aa23.3■■□□□ 1.32
HLA-B-252ENST00000474381 TEX2Q8IWB9 1127 aa23.3■■□□□ 1.32
HLA-B-252ENST00000474381 CUL5Q93034 780 aa23.3■■□□□ 1.32
HLA-B-252ENST00000474381 TOX2Q96NM4 488 aa23.3■■□□□ 1.32
HLA-B-252ENST00000474381 FAM217BQ9NTX9 383 aaPredicted RBP23.3■■□□□ 1.32
HLA-B-252ENST00000474381 EVCP57679 992 aa23.29■■□□□ 1.32
HLA-B-252ENST00000474381 APOBRQ0VD83 1088 aa23.29■■□□□ 1.32
HLA-B-252ENST00000474381 PGM5Q15124 567 aa23.29■■□□□ 1.32
HLA-B-252ENST00000474381 HABP4Q5JVS0 413 aaKnown RBP23.29■■□□□ 1.32
HLA-B-252ENST00000474381 VSIG10LQ86VR7 867 aa23.29■■□□□ 1.32
HLA-B-252ENST00000474381 FCHSD1Q86WN1 690 aa23.29■■□□□ 1.32
HLA-B-252ENST00000474381 GDF15Q99988 308 aa23.29■■□□□ 1.32
HLA-B-252ENST00000474381 SEZ6LQ9BYH1 1024 aa23.29■■□□□ 1.32
HLA-B-252ENST00000474381 PRKAG2Q9UGJ0 569 aa23.29■■□□□ 1.32
HLA-B-252ENST00000474381 CYP46A1Q9Y6A2 500 aa23.29■■□□□ 1.32
HLA-B-252ENST00000474381 FRMPD4Q14CM0 1322 aa23.29■■□□□ 1.32
HLA-B-252ENST00000474381 MROH7Q68CQ1 1323 aa23.29■■□□□ 1.32
HLA-B-252ENST00000474381 A0A0U1RQG5 324 aaPredicted RBP23.28■■□□□ 1.32
HLA-B-252ENST00000474381 A0A1W2PPC1 479 aa23.28■■□□□ 1.32
HLA-B-252ENST00000474381 hCG_1984214I3L0E3 225 aa23.28■■□□□ 1.32
HLA-B-252ENST00000474381 BMP8BP34820 402 aa23.28■■□□□ 1.32
HLA-B-252ENST00000474381 TLE2Q04725 743 aa23.28■■□□□ 1.32
HLA-B-252ENST00000474381 BRDTQ58F21 947 aaPredicted RBP23.28■■□□□ 1.32
HLA-B-252ENST00000474381 ZNF713Q8N859 430 aaPredicted RBP23.28■■□□□ 1.32
HLA-B-252ENST00000474381 OR6J1Q8NGC5 347 aa23.28■■□□□ 1.32
HLA-B-252ENST00000474381 NAP1L2Q9ULW6 460 aaPredicted RBP23.28■■□□□ 1.32
HLA-B-252ENST00000474381 MEIS2O14770 477 aa23.27■■□□□ 1.32
HLA-B-252ENST00000474381 STAM2O75886 525 aa23.27■■□□□ 1.32
HLA-B-252ENST00000474381 ARIH2O95376 493 aa23.27■■□□□ 1.32
HLA-B-252ENST00000474381 PTGS1P23219 599 aa23.27■■□□□ 1.32
HLA-B-252ENST00000474381 CDC27P30260 824 aa23.27■■□□□ 1.32
HLA-B-252ENST00000474381 CCND2P30279 289 aa23.27■■□□□ 1.32
HLA-B-252ENST00000474381 ANAPC15P60006 121 aa23.27■■□□□ 1.32
HLA-B-252ENST00000474381 KCNV1Q6PIU1 500 aa23.27■■□□□ 1.32
HLA-B-252ENST00000474381 SEPT14Q6ZU15 432 aa23.27■■□□□ 1.32
HLA-B-252ENST00000474381 SMARCC2Q8TAQ2 1214 aa23.27■■□□□ 1.32
HLA-B-252ENST00000474381 PSTPIP2Q9H939 334 aa23.27■■□□□ 1.32
HLA-B-252ENST00000474381 PDLIM7Q9NR12 457 aa23.27■■□□□ 1.32
HLA-B-252ENST00000474381 POLR3EQ9NVU0 708 aa23.27■■□□□ 1.32
HLA-B-252ENST00000474381 BAZ2BQ9UIF8 2168 aaKnown RBP23.26■■□□□ 1.31
HLA-B-252ENST00000474381 hCG_1642624A0A1W2PR95 340 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms