RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 HOXA13P31271 388 aaPredicted RBP23.15■■□□□ 1.3
CDHR3-210ENST00000474330 TMEM132BQ14DG7 1078 aa23.15■■□□□ 1.3
CDHR3-210ENST00000474330 LBX2Q6XYB7 198 aa23.15■■□□□ 1.3
CDHR3-210ENST00000474330 ZNF579Q8NAF0 562 aaKnown RBP23.15■■□□□ 1.3
CDHR3-210ENST00000474330 MRPS27Q92552 414 aaKnown RBP23.15■■□□□ 1.3
CDHR3-210ENST00000474330 FERMT2Q96AC1 680 aa23.15■■□□□ 1.3
CDHR3-210ENST00000474330 MAP3K20Q9NYL2 800 aaKnown RBP23.15■■□□□ 1.3
CDHR3-210ENST00000474330 MRVI1Q9Y6F6 885 aa23.15■■□□□ 1.3
CDHR3-210ENST00000474330 LAD1O00515 517 aa23.14■■□□□ 1.29
CDHR3-210ENST00000474330 CCNT1O60563 726 aaKnown RBP23.14■■□□□ 1.29
CDHR3-210ENST00000474330 FKTNO75072 461 aa23.14■■□□□ 1.29
CDHR3-210ENST00000474330 HSD17B4P51659 736 aa23.14■■□□□ 1.29
CDHR3-210ENST00000474330 USP11P51784 963 aa23.14■■□□□ 1.29
CDHR3-210ENST00000474330 ARL6IP4Q66PJ3 421 aaKnown RBP23.14■■□□□ 1.29
CDHR3-210ENST00000474330 PPP4R3AQ6IN85 833 aa23.14■■□□□ 1.29
CDHR3-210ENST00000474330 MB21D1Q8N884 522 aa23.14■■□□□ 1.29
CDHR3-210ENST00000474330 CRYGNQ8WXF5 182 aa23.14■■□□□ 1.29
CDHR3-210ENST00000474330 SYAP1Q96A49 352 aaPredicted RBP23.14■■□□□ 1.29
CDHR3-210ENST00000474330 ABHD8Q96I13 439 aa23.14■■□□□ 1.29
CDHR3-210ENST00000474330 NAP1L4Q99733 375 aaKnown RBP23.14■■□□□ 1.29
CDHR3-210ENST00000474330 ASCC2Q9H1I8 757 aaPredicted RBP23.14■■□□□ 1.29
CDHR3-210ENST00000474330 TMEM63CQ9P1W3 806 aa23.14■■□□□ 1.29
CDHR3-210ENST00000474330 RBBP6Q7Z6E9 1792 aaKnown RBP23.14■■□□□ 1.29
CDHR3-210ENST00000474330 OSBPP22059 807 aa23.13■■□□□ 1.29
CDHR3-210ENST00000474330 CAP1Q01518 475 aa23.13■■□□□ 1.29
CDHR3-210ENST00000474330 TAF1CQ15572 869 aaPredicted RBP23.13■■□□□ 1.29
CDHR3-210ENST00000474330 ANKRD23Q86SG2 305 aa23.13■■□□□ 1.29
CDHR3-210ENST00000474330 FSIP1Q8NA03 581 aa23.13■■□□□ 1.29
CDHR3-210ENST00000474330 CLIC6Q96NY7 704 aa23.13■■□□□ 1.29
CDHR3-210ENST00000474330 TRERF1Q96PN7 1200 aa23.13■■□□□ 1.29
CDHR3-210ENST00000474330 TEX13BQ9BXU2 312 aa23.13■■□□□ 1.29
CDHR3-210ENST00000474330 ZCCHC17Q9NP64 241 aaKnown RBP23.13■■□□□ 1.29
CDHR3-210ENST00000474330 PNMA3Q9UL41 463 aa23.13■■□□□ 1.29
CDHR3-210ENST00000474330 SLC45A1Q9Y2W3 748 aa23.13■■□□□ 1.29
CDHR3-210ENST00000474330 NFIBO00712 420 aa23.12■■□□□ 1.29
CDHR3-210ENST00000474330 SREBF1P36956 1147 aa23.12■■□□□ 1.29
CDHR3-210ENST00000474330 TKFCQ3LXA3 575 aa23.12■■□□□ 1.29
CDHR3-210ENST00000474330 MUM1L1Q5H9M0 696 aa23.12■■□□□ 1.29
CDHR3-210ENST00000474330 SNRNP48Q6IEG0 339 aaKnown RBP23.12■■□□□ 1.29
CDHR3-210ENST00000474330 SHC4Q6S5L8 630 aa23.12■■□□□ 1.29
CDHR3-210ENST00000474330 CTU1Q7Z7A3 348 aaKnown RBP23.12■■□□□ 1.29
CDHR3-210ENST00000474330 GOLPH3LQ9H4A5 285 aa23.12■■□□□ 1.29
CDHR3-210ENST00000474330 RIPK3Q9Y572 518 aa23.12■■□□□ 1.29
CDHR3-210ENST00000474330 GCFC2P16383 781 aaKnown RBP23.11■■□□□ 1.29
CDHR3-210ENST00000474330 STAT3P40763 770 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 POTEEQ6S8J3 1075 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 MOXD1Q6UVY6 613 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 CCDC73Q6ZRK6 1079 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 ENGASEQ8NFI3 743 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 GZF1Q9H116 711 aaPredicted RBP23.11■■□□□ 1.29
CDHR3-210ENST00000474330 ZFYVE28Q9HCC9 887 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 FAM237AA0A1B0GTK4 181 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 PDHXO00330 501 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 NEMFO60524 1076 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 CAPN15O75808 1086 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 PRPHP41219 470 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 HERVK_113P62684 666 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 ARHGAP4P98171 946 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 GRIN1Q05586 938 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 RESP18Q5W5W9 173 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 FCHSD1Q86WN1 690 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 MAF1Q9H063 256 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 TMEM60Q9H2L4 133 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 HOMER2Q9NSB8 354 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 RNF146Q9NTX7 359 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 DACT1Q9NYF0 836 aa23.11■■□□□ 1.29
CDHR3-210ENST00000474330 A0A1B0GVL5 298 aa23.1■■□□□ 1.29
CDHR3-210ENST00000474330 NR1I2O75469 434 aa23.1■■□□□ 1.29
CDHR3-210ENST00000474330 TDP2O95551 362 aa23.1■■□□□ 1.29
CDHR3-210ENST00000474330 FAM160A1Q05DH4 1040 aa23.1■■□□□ 1.29
CDHR3-210ENST00000474330 SNW1Q13573 536 aaKnown RBP23.1■■□□□ 1.29
CDHR3-210ENST00000474330 DDX19AQ9NUU7 478 aaKnown RBP23.1■■□□□ 1.29
CDHR3-210ENST00000474330 CYP3A7-CYP3A51PA0A087WV96 503 aa23.09■■□□□ 1.29
CDHR3-210ENST00000474330 TLR2O60603 784 aa23.09■■□□□ 1.29
CDHR3-210ENST00000474330 CYP3A4P08684 503 aa23.09■■□□□ 1.29
CDHR3-210ENST00000474330 CYP3A7P24462 503 aa23.09■■□□□ 1.29
CDHR3-210ENST00000474330 CCDC183Q5T5S1 534 aa23.09■■□□□ 1.29
CDHR3-210ENST00000474330 CSRNP2Q9H175 543 aa23.09■■□□□ 1.29
CDHR3-210ENST00000474330 EHMT1Q9H9B1 1298 aa23.09■■□□□ 1.29
CDHR3-210ENST00000474330 BTBD7Q9P203 1132 aa23.09■■□□□ 1.29
CDHR3-210ENST00000474330 HPSEQ9Y251 543 aa23.09■■□□□ 1.29
CDHR3-210ENST00000474330 OR52Z1P0C646 297 aa23.08■■□□□ 1.29
CDHR3-210ENST00000474330 NDUFA8P51970 172 aa23.08■■□□□ 1.29
CDHR3-210ENST00000474330 SP3Q02447 781 aa23.08■■□□□ 1.29
CDHR3-210ENST00000474330 IL17AQ16552 155 aa23.08■■□□□ 1.29
CDHR3-210ENST00000474330 FMR1NBQ8N0W7 255 aaPredicted RBP23.08■■□□□ 1.29
CDHR3-210ENST00000474330 MBOAT7Q96N66 472 aa23.08■■□□□ 1.29
CDHR3-210ENST00000474330 VWA3AA6NCI4 1184 aa23.08■■□□□ 1.28
CDHR3-210ENST00000474330 PFKFB1P16118 471 aa23.08■■□□□ 1.28
CDHR3-210ENST00000474330 CIITAP33076 1130 aa23.08■■□□□ 1.28
CDHR3-210ENST00000474330 PLS1Q14651 629 aa23.08■■□□□ 1.28
CDHR3-210ENST00000474330 ZSCAN23Q3MJ62 389 aa23.08■■□□□ 1.28
CDHR3-210ENST00000474330 DTHD1Q6ZMT9 781 aa23.08■■□□□ 1.28
CDHR3-210ENST00000474330 RNF207Q6ZRF8 634 aa23.08■■□□□ 1.28
CDHR3-210ENST00000474330 MTMR9Q96QG7 549 aa23.08■■□□□ 1.28
CDHR3-210ENST00000474330 DDX25Q9UHL0 483 aaKnown RBP23.08■■□□□ 1.28
CDHR3-210ENST00000474330 SLC37A4O43826 429 aa23.07■■□□□ 1.28
CDHR3-210ENST00000474330 CYP2C8P10632 490 aa23.07■■□□□ 1.28
CDHR3-210ENST00000474330 RPS6P62753 249 aaKnown RBP23.07■■□□□ 1.28
CDHR3-210ENST00000474330 POTEDQ86YR6 584 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms