RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 ITGB3BPQ13352 177 aaPredicted RBP16.1■□□□□ 0.17
SAMM50-203ENST00000474323 TLDC1Q6P9B6 456 aa16.1■□□□□ 0.17
SAMM50-203ENST00000474323 FAM228AQ86W67 206 aa16.1■□□□□ 0.17
SAMM50-203ENST00000474323 CYFIP2Q96F07 1278 aa16.1■□□□□ 0.17
SAMM50-203ENST00000474323 NYXQ9GZU5 481 aa16.1■□□□□ 0.17
SAMM50-203ENST00000474323 THAP9Q9H5L6 903 aa16.1■□□□□ 0.17
SAMM50-203ENST00000474323 AGPAT5Q9NUQ2 364 aa16.1■□□□□ 0.17
SAMM50-203ENST00000474323 PES1O00541 588 aaKnown RBP16.09■□□□□ 0.17
SAMM50-203ENST00000474323 TRIM21P19474 475 aaKnown RBP16.09■□□□□ 0.17
SAMM50-203ENST00000474323 PRCPP42785 496 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 CLNS1AP54105 237 aaKnown RBP16.09■□□□□ 0.17
SAMM50-203ENST00000474323 CCDC155Q8N6L0 562 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 LPIN2Q92539 896 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 SH2D4AQ9H788 454 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 RBM28Q9NW13 759 aaKnown RBP16.09■□□□□ 0.17
SAMM50-203ENST00000474323 PDHBP11177 359 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 XBP1P17861 261 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 MCAMP43121 646 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 PHKA1P46020 1223 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 CYP27A1Q02318 531 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 ALX1Q15699 326 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 CCDC96Q2M329 555 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 C11orf91Q3C1V1 193 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 PDXDC2PQ6P474 469 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 TPTE2Q6XPS3 522 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 PIK3R5Q8WYR1 880 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 ALS2CR12Q96Q35 445 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 CNNM2Q9H8M5 875 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 RNF14Q9UBS8 474 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 LRWD1Q9UFC0 647 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 TPX2Q9ULW0 747 aaKnown RBP16.09■□□□□ 0.17
SAMM50-203ENST00000474323 COL24A1Q17RW2 1714 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 AKAP11Q9UKA4 1901 aa16.09■□□□□ 0.17
SAMM50-203ENST00000474323 UBR3Q6ZT12 1888 aa16.08■□□□□ 0.17
SAMM50-203ENST00000474323 RPN1P04843 607 aaKnown RBP16.08■□□□□ 0.17
SAMM50-203ENST00000474323 FGFR2P21802 821 aa16.08■□□□□ 0.17
SAMM50-203ENST00000474323 RCAN1P53805 252 aa16.08■□□□□ 0.17
SAMM50-203ENST00000474323 SLC8A3P57103 927 aa16.08■□□□□ 0.17
SAMM50-203ENST00000474323 MRPS25P82663 173 aaKnown RBP16.08■□□□□ 0.17
SAMM50-203ENST00000474323 CTDSPL2Q05D32 466 aa16.08■□□□□ 0.17
SAMM50-203ENST00000474323 UBE3CQ15386 1083 aa16.08■□□□□ 0.17
SAMM50-203ENST00000474323 SF3B3Q15393 1217 aaKnown RBP16.08■□□□□ 0.17
SAMM50-203ENST00000474323 NBPF9Q3BBW0 867 aa16.08■□□□□ 0.17
SAMM50-203ENST00000474323 EGFL6Q8IUX8 553 aa16.08■□□□□ 0.17
SAMM50-203ENST00000474323 P3H4Q92791 437 aa16.08■□□□□ 0.17
SAMM50-203ENST00000474323 CCDC42Q96M95 316 aa16.08■□□□□ 0.17
SAMM50-203ENST00000474323 MAGEC2Q9UBF1 373 aaPredicted RBP16.08■□□□□ 0.17
SAMM50-203ENST00000474323 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.08■□□□□ 0.17
SAMM50-203ENST00000474323 CAPN6Q9Y6Q1 641 aa16.08■□□□□ 0.17
SAMM50-203ENST00000474323 GMNCA6NCL1 334 aa16.08■□□□□ 0.16
SAMM50-203ENST00000474323 MAFGO15525 162 aa16.08■□□□□ 0.16
SAMM50-203ENST00000474323 CHRNDQ07001 517 aa16.08■□□□□ 0.16
SAMM50-203ENST00000474323 XRCC4Q13426 336 aa16.08■□□□□ 0.16
SAMM50-203ENST00000474323 ZKSCAN8Q15776 578 aaPredicted RBP16.08■□□□□ 0.16
SAMM50-203ENST00000474323 SLC27A3Q5K4L6 730 aa16.08■□□□□ 0.16
SAMM50-203ENST00000474323 SLC10A5Q5PT55 438 aa16.08■□□□□ 0.16
SAMM50-203ENST00000474323 ADSSL1Q8N142 457 aa16.08■□□□□ 0.16
SAMM50-203ENST00000474323 MTRQ99707 1265 aa16.08■□□□□ 0.16
SAMM50-203ENST00000474323 OSBPL7Q9BZF2 842 aa16.08■□□□□ 0.16
SAMM50-203ENST00000474323 EXOC1Q9NV70 894 aa16.08■□□□□ 0.16
SAMM50-203ENST00000474323 SLC5A1P13866 664 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 LACTB2Q53H82 288 aaPredicted RBP16.07■□□□□ 0.16
SAMM50-203ENST00000474323 ANKRD20A8PQ5CZ79 823 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 ARMC9Q7Z3E5 817 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 TMTC2Q8N394 836 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 CCDC82Q8N4S0 544 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 WHAMMQ8TF30 809 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 NLRP3Q96P20 1036 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 KRT23Q9C075 422 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 NFU1Q9UMS0 254 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 A0A1W2PQJ5 194 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 DNM1LO00429 736 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 KRT2P35908 639 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 CARSP49589 748 aaKnown RBP16.07■□□□□ 0.16
SAMM50-203ENST00000474323 NFIXQ14938 502 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 TXNRD1Q16881 649 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 FIGNQ5HY92 759 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 NFRKBQ6P4R8 1299 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 PROM2Q8N271 834 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 NOC3LQ8WTT2 800 aaKnown RBP16.07■□□□□ 0.16
SAMM50-203ENST00000474323 CELF1Q92879 486 aaKnown RBP16.07■□□□□ 0.16
SAMM50-203ENST00000474323 SCLT1Q96NL6 688 aa16.07■□□□□ 0.16
SAMM50-203ENST00000474323 IFIH1Q9BYX4 1025 aaKnown RBP16.07■□□□□ 0.16
SAMM50-203ENST00000474323 RBM12Q9NTZ6 932 aaKnown RBP16.07■□□□□ 0.16
SAMM50-203ENST00000474323 RASSF10A6NK89 507 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 ZNF263O14978 683 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 FAM153BP0C7A2 387 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 FAM153CQ494X1 144 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 CFAP221Q4G0U5 840 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 MAB21L3Q8N8X9 362 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 SMCR8Q8TEV9 937 aaPredicted RBP16.06■□□□□ 0.16
SAMM50-203ENST00000474323 IQCDQ96DY2 449 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 MTA3Q9BTC8 594 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 RNF26Q9BY78 433 aaPredicted RBP16.06■□□□□ 0.16
SAMM50-203ENST00000474323 POLD4Q9HCU8 107 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 PPANQ9NQ55 473 aaKnown RBP16.06■□□□□ 0.16
SAMM50-203ENST00000474323 FAM153AQ9UHL3 310 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 MAPK8IP1Q9UQF2 711 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 GDAQ9Y2T3 454 aa16.06■□□□□ 0.16
SAMM50-203ENST00000474323 PCDHA13Q9Y5I0 950 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms